Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_I07
         (321 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884...    28   1.9  
02_01_0188 - 1262908-1262970,1264185-1264790,1265290-1266030           28   1.9  
03_03_0043 + 14016958-14017106,14017198-14017291,14018488-140185...    27   2.5  
02_01_0717 + 5351504-5351602,5353401-5353499,5353574-5353675,535...    27   2.5  
01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383...    26   5.7  
05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732,582...    26   7.6  
03_01_0438 + 3399203-3399297,3399389-3399480,3399638-3399750,340...    26   7.6  

>03_02_0490 -
           8840577-8840914,8841009-8841067,8841168-8841283,
           8841578-8841640,8841826-8842038,8842211-8842330,
           8842453-8842578,8842593-8842749,8842830-8842962,
           8843054-8843138,8843305-8843421
          Length = 508

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 18  TLLRIHLKHQICLRSLHSPSTEI*CISFCSSHRRTL 125
           TLL     H++C + LH P  ++ C+ F  ++R  L
Sbjct: 180 TLLGTDPYHKLCYKELHHPKCDV-CLQFIPTNRTGL 214


>02_01_0188 - 1262908-1262970,1264185-1264790,1265290-1266030
          Length = 469

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = -1

Query: 177 MKIDPGKKTEKNKSEYVTKYAYDLNKRKCIKFPYSGYGGNVNRFDALNECV 25
           +++  G    + K +  T+Y + + K  C      G GG V   DALN  V
Sbjct: 88  LRVVAGAAASRTKMKVATRYGHSVPKLACPGDGGGGGGGLVISTDALNRVV 138


>03_03_0043 +
           14016958-14017106,14017198-14017291,14018488-14018582,
           14018658-14018825,14019091-14019163,14019236-14019288,
           14019720-14019811,14020141-14020193,14020272-14020397,
           14020710-14020955
          Length = 382

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 168 DPGKKTEKNKSEYVTKYAYD 109
           DPG  T +N S+Y++ Y YD
Sbjct: 134 DPGTVTAENVSQYLSAYPYD 153


>02_01_0717 +
           5351504-5351602,5353401-5353499,5353574-5353675,
           5353756-5353815,5353900-5354006,5354114-5354196,
           5354372-5354462,5354561-5354768
          Length = 282

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -1

Query: 159 KKTEKNKSEYVTKYAYDLNKRKCIKFPYSGYGGNVNR 49
           K TE +  E+  KY    +++K +K  Y+ + GN+NR
Sbjct: 120 KVTEADIEEFEAKYRGSDSEKKDLKDLYTKFKGNMNR 156


>01_03_0161 +
           13337265-13337297,13337880-13338017,13338211-13338308,
           13338395-13338450,13338664-13338781,13338889-13338916,
           13339021-13339112,13339321-13339477,13339569-13339693,
           13339785-13339884,13339991-13340059
          Length = 337

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 162 GKKTEKNKSEYVTKYAYDLNKRKCIKFPYSGY 67
           G   +K KS ++ K   D +K  C K+  SGY
Sbjct: 44  GASFKKAKSVFIAKVDCDEHKSVCSKYGVSGY 75


>05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732,
            5828821-5828907,5828981-5829583,5829680-5829844,
            5829941-5830235,5830320-5830534,5830621-5830926,
            5831200-5831263,5831384-5831623,5831756-5831853
          Length = 1474

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 262  SVVSFMKPRLKWPSAGRIHL 321
            +V++  +P   WPSAGRI L
Sbjct: 1216 AVITDRRPPPSWPSAGRIEL 1235


>03_01_0438 +
           3399203-3399297,3399389-3399480,3399638-3399750,
           3400345-3400610,3400793-3400864,3401023-3401098,
           3401241-3401339,3401432-3401586,3401679-3401783,
           3401880-3401966,3402459-3402543,3402626-3402734,
           3403468-3403544,3403635-3403715,3404137-3404328,
           3404415-3404528,3404650-3404742,3404864-3404990,
           3405075-3405151,3405455-3405502,3405588-3405657,
           3405737-3405810,3405895-3406005,3406222-3406300,
           3406936-3408320
          Length = 1293

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 308 PADGHFNLGFIKDTTLCVFH 249
           PA+G+FN+  +   T CV H
Sbjct: 98  PAEGNFNVVTVVSITFCVLH 117


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,844,491
Number of Sequences: 37544
Number of extensions: 137839
Number of successful extensions: 257
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)