Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_I06
(686 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 69 4e-14
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 2.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 3.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 3.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 3.6
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 3.6
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 3.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 3.6
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 4.8
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 4.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 6.3
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 8.3
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 68.9 bits (161), Expect = 4e-14
Identities = 39/98 (39%), Positives = 52/98 (53%)
Frame = -2
Query: 574 KSVDFHYEFFRVNCKAIVSSIHGRQSQAKRKEAYHGFVEAQNGALFCTDVAARGLDIPSV 395
K DF F N +SIHG + Q +R+EA F + L T VAARGLDI +V
Sbjct: 462 KKADFIAVFLSEN-NYPTTSIHGDRLQRQREEALADFKSGRMSILVATAVAARGLDIKNV 520
Query: 394 DWIVQYDPPTDPKEYIHRVGRTARGMNSKGNAVILLRP 281
++ YD P EY+HR+GRT R + ++G A P
Sbjct: 521 SHVINYDLPKGIDEYVHRIGRTGR-VGNRGRATSFFDP 557
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 23.0 bits (47), Expect = 2.7
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = -2
Query: 238 YLDKYTFGDPPADIQEFLQKL 176
Y+D +T+ DP ++EF +++
Sbjct: 608 YVDPHTYEDPNQAVREFAREI 628
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 221 FWRSPGRHTRISSKTNKRERSYESFGEKSFS 129
F R+ H+R ++ SY + GE+S S
Sbjct: 224 FQRTSSCHSRYEDSRHEDRNSYRNDGERSCS 254
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 221 FWRSPGRHTRISSKTNKRERSYESFGEKSFS 129
F R+ H+R ++ SY + GE+S S
Sbjct: 224 FQRTSSCHSRYEDSRHEDRNSYRNDGERSCS 254
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 221 FWRSPGRHTRISSKTNKRERSYESFGEKSFS 129
F R+ H+R ++ SY + GE+S S
Sbjct: 224 FQRTSSCHSRYEDSRHEDRNSYRNDGERSCS 254
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 221 FWRSPGRHTRISSKTNKRERSYESFGEKSFS 129
F R+ H+R ++ SY + GE+S S
Sbjct: 224 FQRTSSCHSRYEDSRHEDRNSYRNDGERSCS 254
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 221 FWRSPGRHTRISSKTNKRERSYESFGEKSFS 129
F R+ H+R ++ SY + GE+S S
Sbjct: 224 FQRTSSCHSRYEDSRHEDRNSYRNDGERSCS 254
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 221 FWRSPGRHTRISSKTNKRERSYESFGEKSFS 129
F R+ H+R ++ SY + GE+S S
Sbjct: 224 FQRTSSCHSRYEDSRHEDRNSYRNDGERSCS 254
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 4.8
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Frame = -1
Query: 323 RYEQQRQCSDIT*T----RGRGIREVLRERKSLFR*IHFWRSPGRHTRISSKTNKRERSY 156
RY ++R CS + R ++ E++ L + R K K ER Y
Sbjct: 230 RYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREY 289
Query: 155 ESFGEKS 135
+GE S
Sbjct: 290 RKYGETS 296
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +3
Query: 615 FFNILYNQAILFSTGQMXYPC 677
FFNI + LF T + PC
Sbjct: 226 FFNITLRRKTLFYTVNLIVPC 246
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 221 FWRSPGRHTRISSKTNKRERSYESFGEKSFS 129
F R+ H+R ++ SY + GE+S S
Sbjct: 224 FQRTSSCHSRYEDLRHEDRNSYRNDGERSCS 254
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 221 FWRSPGRHTRISSKTNKRERSYESFGEKSFS 129
F R+ H+R ++ SY + GE+S S
Sbjct: 224 FQRTSSCHSRYEDSRHEDGNSYRNDGERSCS 254
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 6.3
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Frame = -1
Query: 323 RYEQQRQCSDIT*T----RGRGIREVLRERKSLFR*IHFWRSPGRHTRISSKTNKRERSY 156
RY ++R CS + R ++ E++ L R K+ K ER Y
Sbjct: 230 RYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSRERYSRSREREQKSYKNEREY 289
Query: 155 ESFGEKS 135
+GE S
Sbjct: 290 RKYGETS 296
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.4 bits (43), Expect = 8.3
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 309 LLFIPRAVRPTLC-MYSLGSVGGSYWTIQSTLGMSSPLAATSVQNNAPFCASTKP 470
LL +P A+ + +S G++ W L ++ + + + FCA TKP
Sbjct: 92 LLVMPMALLYEISGNWSFGTIMCDLWVSFDVLSCTASILNLCMISVDRFCAITKP 146
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,602
Number of Sequences: 438
Number of extensions: 3981
Number of successful extensions: 29
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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