Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_I02
(740 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 228 7e-61
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 194 1e-50
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 177 1e-45
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 164 1e-41
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 140 3e-34
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 118 1e-27
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 103 2e-23
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 83 3e-17
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 56 7e-09
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 28 1.6
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 2.8
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 27 3.7
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.7
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 27 3.7
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 4.9
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 6.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 6.5
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 6.5
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 228 bits (557), Expect = 7e-61
Identities = 104/142 (73%), Positives = 114/142 (80%)
Frame = -2
Query: 739 ELRXDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNK 560
+L DV PKT NFRALCTGEKG+GY GS FHRVIP FMLQGGDFT NGTGGKSIYG K
Sbjct: 21 KLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEK 80
Query: 559 FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 380
F DENF LKH PG+LSMANAG +TNGSQFFITTV T WLDG+HVVFG V EGM+VVK++
Sbjct: 81 FPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKV 140
Query: 379 ETFGSQSGKTSKRIVIKDCGQI 314
E+ GS SG T RIVI CG +
Sbjct: 141 ESLGSNSGATRARIVIDKCGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 194 bits (473), Expect = 1e-50
Identities = 86/113 (76%), Positives = 97/113 (85%)
Frame = -2
Query: 718 PKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFT 539
PKT ENFRAL TGEKGFGY+GSIFHRVIPNFM+QGGD T +GTGGKSIYG++F DENF
Sbjct: 53 PKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFK 112
Query: 538 LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 380
L H PG+LSMANAG D+NGSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 113 LSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 177 bits (431), Expect = 1e-45
Identities = 87/144 (60%), Positives = 104/144 (72%), Gaps = 4/144 (2%)
Frame = -2
Query: 739 ELRXDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSI 572
EL +V PKT +NF +LC G + G YKGS FHRVI NFMLQGGDFT NGTGG+SI
Sbjct: 22 ELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESI 81
Query: 571 YGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEV 392
YG KFEDENF LKH P +LSMANAG +TNGSQFFITTV T LDG+HVVFG V++G
Sbjct: 82 YGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKST 141
Query: 391 VKQIETFGSQSGKTSKRIVIKDCG 320
V+ IE +++ +VI++CG
Sbjct: 142 VRTIENLETKNDDPVVPVVIEECG 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 164 bits (398), Expect = 1e-41
Identities = 78/145 (53%), Positives = 101/145 (69%), Gaps = 8/145 (5%)
Frame = -2
Query: 724 VTPKTCENFRALCTGE------KGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGN 563
+ PKT ENFR CTGE K GYK S FHR+I FM+QGGDF + +GTG +I+ +
Sbjct: 29 IVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNS 88
Query: 562 K-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVK 386
+ F DENFTLKH PG+LSMANAG D+NG QFFITTV +LDG+HVVFG V+EG ++VK
Sbjct: 89 RTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVK 148
Query: 385 QIE-TFGSQSGKTSKRIVIKDCGQI 314
+IE T + + + I +CG++
Sbjct: 149 EIESTPVGANSRPKSNVAIVECGEM 173
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 140 bits (338), Expect = 3e-34
Identities = 69/121 (57%), Positives = 87/121 (71%), Gaps = 1/121 (0%)
Frame = -2
Query: 739 ELRXDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNK 560
EL + PKTC+NF L ++G+ Y G IFHRVIP+F++QGGD T G GG SIYG+K
Sbjct: 16 ELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDK 71
Query: 559 FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQ 383
F+DE + L HTG G+LSMANAG +TN SQFFIT T WLDG+H +FG VV G+ V K+
Sbjct: 72 FDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKR 131
Query: 382 I 380
+
Sbjct: 132 M 132
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 118 bits (283), Expect = 1e-27
Identities = 61/122 (50%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
Frame = -2
Query: 739 ELRXDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNK 560
+L + PK +NF E G+ Y +IFHR+I NFM+QGGD +GTGG+SI+
Sbjct: 469 KLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGESIWKKD 524
Query: 559 FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQ 383
FEDE + LKH P +SMAN+G +TNGSQFFITT T WLDG+H +F G++VV +
Sbjct: 525 FEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHR 584
Query: 382 IE 377
IE
Sbjct: 585 IE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 103 bits (248), Expect = 2e-23
Identities = 58/133 (43%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
Frame = -2
Query: 739 ELRXDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNK 560
EL D P NF L ++G+ Y+ +IFHR I FM+QGGD + G GG+SI+G
Sbjct: 290 ELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQSIWGKP 345
Query: 559 FEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQ 383
F+DE LKH G++SMAN G +TNGSQFFI LD +H +FG VV G+ V+
Sbjct: 346 FKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDA 405
Query: 382 IETFGSQSGKTSK 344
+E + S K
Sbjct: 406 LEKVPTNSNDHPK 418
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 83.4 bits (197), Expect = 3e-17
Identities = 49/112 (43%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Frame = -2
Query: 739 ELRXDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNK 560
EL PK C NF LC +G+ Y G+I HRV+P F++QGGD T G GG+SIYG
Sbjct: 27 ELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGESIYGEP 82
Query: 559 FEDENF-TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 407
F E L+ G++ MA + N SQFFIT T +G+ +FG VV
Sbjct: 83 FAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 55.6 bits (128), Expect = 7e-09
Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Frame = -2
Query: 718 PKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIY-----GNKFE 554
PKTCENF LC K Y F+ + N+ Q GD G GG+ ++ G +F
Sbjct: 22 PKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGDGGRCVWNVLNKGTRFF 78
Query: 553 DENF--TLKHTGPGVLSMANAGADTN-------GSQFFIT-TVKTSWLDGRHVVFGNVVE 404
F +L H G++SM+ A + GSQF IT + LD R+ ++G V E
Sbjct: 79 KAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEGLDERYPIYGQVAE 138
Query: 403 GMEVVKQI-ETFGSQSGKTSKRIVIK 329
G + + +I + + G+ + I IK
Sbjct: 139 GFDTLLKINDAICDEEGQPYRDIRIK 164
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.9 bits (59), Expect = 1.6
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = -3
Query: 726 TSLPRHVKTSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGENPSTAISLRTR 547
TS P H T+ A + + +RA S++S I KE +P+ITA +P +A S +
Sbjct: 303 TSSPLHQSTT---ANHPEKTPSRAAASLLS--ILDSKEKNTPSITAKAGSPQSAPSKASY 357
Query: 546 ISP 538
ISP
Sbjct: 358 ISP 360
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 354 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 440
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 26.6 bits (56), Expect = 3.7
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 554 LKLIAVDGFSPSAVMVGEVPSLQHEIGDDTMENGALVTEAFLASAQGTEVFTCLGSD 724
LKL+ G + VM+ + + E+ + A+++ L S GT + + LG +
Sbjct: 311 LKLLTEHGIECTYVMISALSYIMQEVTKIFLGGHAMLSNGALYSRAGTSLISLLGHE 367
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.7
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 482 WFPVLHHHC 456
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +2
Query: 320 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELG 478
T VFD + +L+ ++++DN +IPK+ A S + +G
Sbjct: 525 TVVFDKTGTLTVGKLSVTDISIVDNLEELLDIPKNIFWAFVKASESSSEHPIG 577
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 4.9
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 387 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 536
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 6.5
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 610 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 464
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 6.5
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -3
Query: 702 TSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGENPSTAISLRTRISPLST 529
TS C + S+ S +S+PI+ TS + T++ P++ S T SPL T
Sbjct: 225 TSTSCTTS--TSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 25.4 bits (53), Expect = 8.6
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 702 TSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGENPSTAISLRTRISPLST 529
TS C + T S+ S+PI+ TS + T++ P++ S T SPL T
Sbjct: 168 TSTSCTTSTSIPPTGGSSSL-STPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 6.5
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 369 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 548
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 549 SSSNL 563
SSS++
Sbjct: 222 SSSSI 226
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,048,878
Number of Sequences: 5004
Number of extensions: 66020
Number of successful extensions: 185
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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