Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_H24
         (645 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0483 + 19546295-19546397,19547163-19547482,19547606-195486...    28   5.5  
05_04_0308 - 20081366-20082404,20082702-20083078,20084293-200846...    27   9.7  
03_06_0136 + 31933843-31934715,31934906-31935021,31935233-319354...    27   9.7  
03_05_0124 + 21034963-21035181,21035618-21037466,21037485-210381...    27   9.7  

>12_02_0483 +
           19546295-19546397,19547163-19547482,19547606-19548611,
           19549890-19549985,19550500-19551551
          Length = 858

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 KNETTTIKYESEYEKSYKVKFKSNTSH*RNTYR*NRIHEYYYEFNQ*MHF 292
           KN T T +Y  E ++S+++K +    +     R N     +YE +Q +HF
Sbjct: 80  KNRTKTKRYLEEVDESFRMKIREVWHNEMREQRRNIFFFDWYENSQIIHF 129


>05_04_0308 -
           20081366-20082404,20082702-20083078,20084293-20084679,
           20085038-20086000
          Length = 921

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 KNETTTIKYESEYEKSYKVKFKSNTSH*RNTYR*NRIHEYYYEFNQ*MHF 292
           KN T T +Y  E +KS+++K +    +     R N     +YE +Q ++F
Sbjct: 155 KNRTKTKRYLEEVDKSFRMKIREVWHNEMREQRRNIFFFDWYENSQIIYF 204


>03_06_0136 +
           31933843-31934715,31934906-31935021,31935233-31935408,
           31935846-31936036,31936119-31936205,31936304-31936461,
           31936555-31936765,31936856-31937005
          Length = 653

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 114 RFPTRVETIKKTKQLQLSTKANTKNHIK 197
           +FP +++T+K   QL +S  A TK  +K
Sbjct: 439 QFPDKIKTLKPITQLYVSVDAATKESLK 466


>03_05_0124 +
           21034963-21035181,21035618-21037466,21037485-21038194,
           21038426-21038470,21038557-21038745
          Length = 1003

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 2   QIQHSHLILTSPACRQRSVNNILK 73
           ++QH +L+L SP C  + + N+ K
Sbjct: 638 KLQHLNLVLWSPLCMPKGIGNLTK 661


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,751,329
Number of Sequences: 37544
Number of extensions: 199991
Number of successful extensions: 410
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)