Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_H17
(755 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 361 e-101
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 337 1e-93
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 160 2e-40
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 159 4e-40
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 150 2e-37
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 128 6e-31
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 127 2e-30
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 124 2e-29
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 109 3e-25
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 97 4e-25
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 108 1e-24
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 104 1e-23
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 101 8e-23
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 100 4e-22
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 98 1e-21
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 81 1e-16
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 80 3e-16
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 74 3e-14
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 73 4e-14
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 73 4e-14
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 72 8e-14
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 72 8e-14
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 69 5e-13
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 69 7e-13
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 58 1e-09
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 55 1e-08
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 48 1e-06
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 44 3e-05
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 38 0.002
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 35 0.011
SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3 |Schi... 31 0.23
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 29 0.95
SPAC25A8.01c ||snf2SR|fun thirty related protein Fft3|Schizosacc... 29 0.95
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 28 1.3
SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces pomb... 27 2.9
SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz... 27 3.8
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 27 3.8
SPAC1786.01c ||SPAC31G5.20c|triacylglycerol lipase|Schizosacchar... 26 5.0
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 26 5.0
SPAC821.05 |||translation initiation factor eIF3h|Schizosaccharo... 26 5.0
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 25 8.8
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 25 8.8
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 361 bits (887), Expect = e-101
Identities = 162/199 (81%), Positives = 188/199 (94%)
Frame = -2
Query: 754 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 575
QVV++SATLP ++LEMT+KF T+P+RILVKRDELTLEG+KQ+F+AVE+EEWKFDTLCDLY
Sbjct: 196 QVVVVSATLPQDVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLCDLY 255
Query: 574 DTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLI 395
DTLTITQAVIFCN++RKVDWLT+KM+EANFTV+SMHG+MPQKERD IM++FR G SRVLI
Sbjct: 256 DTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLI 315
Query: 394 TTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDI 215
TD+WARGIDVQQVSLVINYDLP NRE YIHRIGRSGRFGRKGVAINFV ++D+RILRDI
Sbjct: 316 CTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDI 375
Query: 214 EQYYSTQIDEMPMNVADLI 158
EQYYST IDEMPMN+ D++
Sbjct: 376 EQYYSTVIDEMPMNIGDMV 394
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 337 bits (828), Expect = 1e-93
Identities = 151/199 (75%), Positives = 183/199 (91%)
Frame = -2
Query: 754 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 575
QVVL+SAT+P ++LE+T+KFM DPIRILVK+DELTLEGIKQF+VAVE+EEWK DTLCDLY
Sbjct: 194 QVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLDTLCDLY 253
Query: 574 DTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLI 395
+T+T+TQAVIFCNT+RKVDWLT+++ E +FTVSSMHGDM Q +RD +M EFR+G SR+LI
Sbjct: 254 ETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILI 313
Query: 394 TTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDI 215
TTD+ ARGIDVQQVSLVINYDLP NRE YIHRIGR GRFGRKGV+INFV +DD+R++R+I
Sbjct: 314 TTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREI 373
Query: 214 EQYYSTQIDEMPMNVADLI 158
EQ+Y+T I+EMPMN+ADLI
Sbjct: 374 EQFYNTHIEEMPMNIADLI 392
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 160 bits (389), Expect = 2e-40
Identities = 82/199 (41%), Positives = 125/199 (62%), Gaps = 7/199 (3%)
Frame = -2
Query: 754 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 575
Q+VL SAT + + +F + I +K +EL++EGIKQ ++ + EE K++ L +LY
Sbjct: 288 QIVLFSATFSERVEKYAERFAPNANEIRLKTEELSVEGIKQLYMDCQSEEHKYNVLVELY 347
Query: 574 DTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLI 395
LTI Q++IFC K + + ++M TV+ + G++ +RD IM FR G S+VL+
Sbjct: 348 GLLTIGQSIIFCKKKDTAEEIARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLV 407
Query: 394 TTDVWARGIDVQQVSLVINYDLPNNR------ELYIHRIGRSGRFGRKGVAINFV-KSDD 236
TT+V ARGIDV QV+LV+NYD+P ++ + Y+HRIGR+GRFGR GV+INFV
Sbjct: 408 TTNVIARGIDVSQVNLVVNYDMPLDQAGRPDPQTYLHRIGRTGRFGRVGVSINFVHDKKS 467
Query: 235 IRILRDIEQYYSTQIDEMP 179
+ I++Y+ I +P
Sbjct: 468 WEEMNAIQEYFQRPITRVP 486
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 159 bits (386), Expect = 4e-40
Identities = 80/194 (41%), Positives = 127/194 (65%), Gaps = 2/194 (1%)
Frame = -2
Query: 754 QVVLISATLPHEILEMTSKFMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDL 578
QV++ SATL +EI + KFM +P+ I V + +LTL G++Q +V +E E+ K + DL
Sbjct: 231 QVMMFSATLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLE-EKAKNRKINDL 289
Query: 577 YDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVL 398
D+L Q VIF + + + L + ++E NF +HG +PQ+ER K F+ R+
Sbjct: 290 LDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFKDFDKRIC 349
Query: 397 ITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS-DDIRILR 221
+ TDV+ RGID+++V++VINYD+P++ + Y+HR+GR+GRFG KG+AI F S +D +IL
Sbjct: 350 VATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFSSSEEDSQILD 409
Query: 220 DIEQYYSTQIDEMP 179
I++ + I E+P
Sbjct: 410 KIQERFEVNITELP 423
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 150 bits (363), Expect = 2e-37
Identities = 77/195 (39%), Positives = 114/195 (58%)
Frame = -2
Query: 754 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 575
Q+ L SAT P + K + P I + DELTL G+ Q++ V+ E K L L+
Sbjct: 219 QISLYSATFPLIVKNFMDKHLNKPYEINLM-DELTLRGVTQYYAFVD-ESQKVHCLNTLF 276
Query: 574 DTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLI 395
L I Q++IFCN+ +V+ L +K+ E ++ H M Q R+ + FR+G R L+
Sbjct: 277 SKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVFHNFRNGVCRNLV 336
Query: 394 TTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDI 215
+D+ RGID+Q V++VIN+D P N E Y+HRIGRSGRFG +G+AI+F+ D L I
Sbjct: 337 CSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHRGLAISFISWADRFNLYRI 396
Query: 214 EQYYSTQIDEMPMNV 170
E T+I +P ++
Sbjct: 397 ENELGTEIQPIPPSI 411
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 128 bits (310), Expect = 6e-31
Identities = 72/193 (37%), Positives = 109/193 (56%), Gaps = 1/193 (0%)
Frame = -2
Query: 754 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 575
Q ++ SAT P +I + F+ D + + V R T E I Q V VE E K L D+
Sbjct: 366 QTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSE-KRSYLLDIL 424
Query: 574 DTLTITQ-AVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVL 398
TL +IF TKR D LT + +NF +S+HGD Q+ER+ ++ FRSG++ ++
Sbjct: 425 HTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIM 484
Query: 397 ITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRD 218
+ T V +RG+D+ V+ VINYDLP + + Y+HRIGR+GR G G A+ F ++ I ++
Sbjct: 485 VATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKE 544
Query: 217 IEQYYSTQIDEMP 179
+ + E P
Sbjct: 545 LIELLQEANQECP 557
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 127 bits (306), Expect = 2e-30
Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Frame = -2
Query: 754 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLE-GIKQFFVAVEREEWKFDTLCDL 578
Q V+ SAT P E+ + ++ D I++ V +L IKQ V+ + + D+
Sbjct: 302 QTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDI 361
Query: 577 YDTLTI--TQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSR 404
+ L + +IF TKR D +T+ +++ + ++HGD Q ERD ++ EFR+G+S
Sbjct: 362 EEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSP 421
Query: 403 VLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRIL 224
+++ TDV +RGIDV+ ++ V NYD P N E Y+HRIGR+GR G KG A + SD+ +
Sbjct: 422 IMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQA 481
Query: 223 RDI 215
R++
Sbjct: 482 REL 484
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 124 bits (298), Expect = 2e-29
Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 4/202 (1%)
Frame = -2
Query: 754 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDL- 578
Q VL SAT P + + K + P+ I V + ++Q V V EE KF L +L
Sbjct: 601 QTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQI-VEVRPEESKFSRLLELL 659
Query: 577 ---YDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQS 407
Y+ + ++F + + D L + + +T +S+HG Q +RD+ + ++++G
Sbjct: 660 GELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVF 719
Query: 406 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRI 227
VLI T V ARG+DV+ + LV+NYD PN+ E Y+HR+GR+GR G GVA+ F+ + +
Sbjct: 720 DVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKY 779
Query: 226 LRDIEQYYSTQIDEMPMNVADL 161
DI + +P + L
Sbjct: 780 AVDIAKALKMSKQPVPKELQTL 801
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 109 bits (263), Expect = 3e-25
Identities = 48/181 (26%), Positives = 103/181 (56%), Gaps = 1/181 (0%)
Frame = -2
Query: 754 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 575
Q ++ SATLP + + ++ +P+ + + ++ ++Q + + K+ + ++
Sbjct: 451 QTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEIL 510
Query: 574 DTLTITQAVI-FCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVL 398
++ + +I F N KR ++ + +++ + ++HG Q++R+ +++ R+ + +L
Sbjct: 511 ESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADIL 570
Query: 397 ITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRD 218
+ TD+ RGID+ VSLV+NY++ + E Y HRIGR+GR G+ G AI F+ +D + D
Sbjct: 571 VATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDTDVYYD 630
Query: 217 I 215
+
Sbjct: 631 L 631
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 97.5 bits (232), Expect(2) = 4e-25
Identities = 41/115 (35%), Positives = 78/115 (67%)
Frame = -2
Query: 550 VIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARG 371
++F TK V+++++ + +A ++VS ++G + Q+ R N + FR G++ +L+ TDV +RG
Sbjct: 350 LVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASRG 409
Query: 370 IDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQY 206
ID+ ++ VINYD P ++++HR+GR+ R GR G A + V+++D L D++ +
Sbjct: 410 IDIPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAYSLVRAEDAGYLLDLQLF 464
Score = 33.1 bits (72), Expect(2) = 4e-25
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = -2
Query: 754 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 575
Q +L SATLP +++ + DP+ + + + ++ F +V+ E + LC L
Sbjct: 246 QTLLFSATLPRTLVDFAKAGLQDPVLVRLDVESKVSADLQSAFFSVKTAEREAALLCILQ 305
Query: 574 DTLTI 560
D + +
Sbjct: 306 DIIKL 310
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 108 bits (259), Expect = 1e-24
Identities = 60/171 (35%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
Frame = -2
Query: 745 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 566
L SAT+P + E+ DPIRI+V + + I Q + V + K L +
Sbjct: 226 LFSATIPSRVEELAKVVTVDPIRIIVGLKDAATDSIDQRLLFVGSDTSKIVILRQMISNG 285
Query: 565 TIT-QAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITT 389
+ + VIF + L ++ V +HG++PQ +R+ + +FR G+ VLI T
Sbjct: 286 ELKPRVVIFVQDIERAKALYTELLFDEIHVGVIHGELPQAKREEALAKFRKGEIWVLIAT 345
Query: 388 DVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 236
D+ ARGID V +VIN+D P + YIHRIGR+GR G G A+ F +D
Sbjct: 346 DLLARGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFTKED 396
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 104 bits (250), Expect = 1e-23
Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
Frame = -2
Query: 754 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAV--EREEWKFDTLCD 581
Q +L SAT+ ++ ++ + P+R+ V + T + + Q FV V +RE + L
Sbjct: 438 QTMLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEFVRVRPQRELLRPAMLIY 497
Query: 580 LYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRV 401
L L + +IF +K + + + +HG + Q++R +++FR G+
Sbjct: 498 LCKELFHRRTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRALEDFRDGKCNY 557
Query: 400 LITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILR 221
L+ TDV +RGID++ + +VINY+ P E+Y+HR+GR+ R GR G AI D ++L+
Sbjct: 558 LLATDVASRGIDIKGIEVVINYEAPATHEVYLHRVGRTARAGRSGRAITLAGEGDRKVLK 617
Query: 220 DIEQYYSTQ 194
+ + S Q
Sbjct: 618 GVFKNSSAQ 626
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 101 bits (243), Expect = 8e-23
Identities = 46/123 (37%), Positives = 76/123 (61%)
Frame = -2
Query: 553 AVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWAR 374
A+IF N R + + ++ V+ +H +M Q+ER N + FR+ +++L+ TDV +R
Sbjct: 261 AIIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATDVASR 320
Query: 373 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQ 194
G+D+ V LVIN+DLP + + YIHR+GR+ R GR G +I+ V D+ ++ IE T+
Sbjct: 321 GLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGESISIVTERDVDLVHAIEDRVGTK 380
Query: 193 IDE 185
+ E
Sbjct: 381 LSE 383
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 99.5 bits (237), Expect = 4e-22
Identities = 56/190 (29%), Positives = 95/190 (50%)
Frame = -2
Query: 754 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 575
+ +L SAT+ ++ ++ + P+R+ V T++ + Q ++ + K L L
Sbjct: 222 RTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFSTVDTLIQRYLFFPFKH-KDTYLVYLV 280
Query: 574 DTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLI 395
+ L +IF T L ++ F+ +HG + Q R + +F+SG L+
Sbjct: 281 NELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLV 340
Query: 394 TTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDI 215
TDV ARG+D+ V +VINYD+P + + YIHR+GR+ R GR G +I V D+ I
Sbjct: 341 ATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLEPFLRI 400
Query: 214 EQYYSTQIDE 185
E ++ E
Sbjct: 401 EATIGKKMQE 410
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 98.3 bits (234), Expect = 1e-21
Identities = 62/179 (34%), Positives = 91/179 (50%), Gaps = 6/179 (3%)
Frame = -2
Query: 754 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTL-EGIKQFFVAVE---REEWKFDTL 587
Q V SAT P + + + F+ DP++I + DEL + I Q ++ +E D L
Sbjct: 347 QTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKERMLDNL 406
Query: 586 C--DLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSG 413
L + +IF K++ + + + V +HGDM Q R + +F+SG
Sbjct: 407 LRKHLSSGGKDDKILIFVLYKKEAARVEGTLAR-KYNVVGIHGDMSQGARLQALNDFKSG 465
Query: 412 QSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 236
+ VL+ TDV ARG+D+ +V LVIN P E Y+HRIGR+GR KG AI F D
Sbjct: 466 KCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGRANTKGTAITFFTPQD 524
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 81.4 bits (192), Expect = 1e-16
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 4/201 (1%)
Frame = -2
Query: 754 QVVLISATLPHEILEMTSKFMTDPIRILVKRDEL--TLEGIKQFFVAVEREEWKFDTLCD 581
Q +L SAT + ++ + +P I V ++ T + QF++ V E K D L
Sbjct: 218 QTMLFSATQTKSVKDLARLSLQNPDFISVHENDTSSTPSNLNQFYLTVPLTE-KLDILFG 276
Query: 580 LYDTLTITQAVIFCNTKRKVDWL--TQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQS 407
T + ++F ++ ++V ++ T + ++ +HG Q R + +F S +
Sbjct: 277 FIRTHLKFKTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQKQTTRTEVTAKFTSSRH 336
Query: 406 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRI 227
VL TD+ ARG+D V VI D P + + YIHR+GR+ R+ R G A+ + +
Sbjct: 337 VVLFCTDIVARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTARYNRSGNALLLLLPSEEAF 396
Query: 226 LRDIEQYYSTQIDEMPMNVAD 164
L+ +E S +I +NV D
Sbjct: 397 LKRLE---SKKIAVERINVKD 414
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 80.2 bits (189), Expect = 3e-16
Identities = 49/183 (26%), Positives = 95/183 (51%), Gaps = 5/183 (2%)
Frame = -2
Query: 754 QVVLISATLPHEILEMTS-KFMTDPIRILVK--RDELTLEGIKQFFVAVEREEWKFDTLC 584
Q +L SAT ++ ++ P+ + V + T+EG++Q +V V+ ++ +F L
Sbjct: 270 QTLLFSATQTTKVEDLARISLKPGPLYVNVDSGKPTSTVEGLEQGYVVVDSDK-RFLLLF 328
Query: 583 DLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSR 404
+ ++F ++ V ++ + + + V +HG Q+ R N EF + +
Sbjct: 329 SFLKRNLKKKVIVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKG 388
Query: 403 VLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGV--AINFVKSDDIR 230
+L+ T+V ARG+D+ V ++ YD P++ YIHR+GR+ R G KG ++ F+ ++
Sbjct: 389 ILLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVGRTAR-GTKGTGKSLMFLAPSELG 447
Query: 229 ILR 221
LR
Sbjct: 448 FLR 450
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 73.7 bits (173), Expect = 3e-14
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Frame = -2
Query: 481 VSSMHGDMPQKERDNIMKEFRSGQ---SRVLITTDVWARGIDVQQVSLVINYDLPNNREL 311
V +HG + Q+ R + + F S + S +L+ TDV ARG+D+ V LV+ YD P + +
Sbjct: 470 VYRLHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDD 529
Query: 310 YIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI 158
Y+HRIGR+ R G G AI F+ + + ++ S I E P + L+
Sbjct: 530 YLHRIGRTARAGHNGAAIMFLLPKESEYINLLKSSVSANILEQPNGPSGLL 580
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 72.9 bits (171), Expect = 4e-14
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 6/154 (3%)
Frame = -2
Query: 604 WKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKM--QEANFTVSSMHGDMPQKERDNIM 431
+K + L T+ +A++F ++ V++ + F + ++HG Q R
Sbjct: 242 YKVQCMIHLLCTIEYEKAIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQSNRSRNF 301
Query: 430 KEFR-SGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAI- 257
++F+ S + VL TTD+ +RG+D+ V V+ D P + + + HR GR+GR GR GVAI
Sbjct: 302 EKFKKSNKKTVLFTTDIASRGLDIPNVDFVLQLDPPLDPKSFSHRCGRAGRAGRAGVAIV 361
Query: 256 --NFVKSDDIRILRDIEQYYSTQIDEMPMNVADL 161
N + ++ L + + T+ID P+ DL
Sbjct: 362 LLNDGREEEYEELLRVRKVPITRID-TPIEALDL 394
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 72.9 bits (171), Expect = 4e-14
Identities = 33/100 (33%), Positives = 58/100 (58%)
Frame = -2
Query: 556 QAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWA 377
+ ++F N + +T + E +H + QK+R +++F++ VL+ TDV A
Sbjct: 391 KTMVFANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCTDVAA 450
Query: 376 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAI 257
RGID+ V+ VI+Y +P+ ++Y+HR GR+ R GV+I
Sbjct: 451 RGIDIPSVTHVIHYHVPHTADMYVHRSGRTARANEDGVSI 490
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 72.1 bits (169), Expect = 8e-14
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Frame = -2
Query: 745 LISATLPHEILEMTSKFMTDPIRILVKRDELTL-EGIKQFFVAVEREEWKFDTLCDLYDT 569
L+SAT P + LEM ++ T V R+ T E I F + E+ D + T
Sbjct: 1352 LLSATFPRQ-LEMVAR-QTFCTNFYVLRETSTARENIFYFLHPYDNTEFLLDLRTLMKRT 1409
Query: 568 LTIT---QAVIFCNTKRKVDWLTQKMQE----ANFTVSSMHGDMPQKERDNIMKEFR--S 416
+A+IFC TK+ V+++ +++ + A+ V+ GD+ +ER FR +
Sbjct: 1410 KVFEGDGRAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNAN 1469
Query: 415 GQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 236
G++R++I T + GI+ V LV++Y LP + Y+ GR+GR G+ +A F + D
Sbjct: 1470 GKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGRAGRDGKYAIAALFYEKYD 1529
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 72.1 bits (169), Expect = 8e-14
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Frame = -2
Query: 745 LISATLPHEILEMTSKFMTDPIRILVKRDELTL-EGIKQFFVAVEREEWKFDTLCDLYDT 569
L+SAT P + LEM ++ T V R+ T E I F + E+ D + T
Sbjct: 1352 LLSATFPRQ-LEMVAR-QTFCTNFYVLRETSTARENIFYFLHPYDNTEFLLDLRTLMKRT 1409
Query: 568 LTIT---QAVIFCNTKRKVDWLTQKMQE----ANFTVSSMHGDMPQKERDNIMKEFR--S 416
+A+IFC TK+ V+++ +++ + A+ V+ GD+ +ER FR +
Sbjct: 1410 KVFEGDGRAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNAN 1469
Query: 415 GQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 236
G++R++I T + GI+ V LV++Y LP + Y+ GR+GR G+ +A F + D
Sbjct: 1470 GKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGRAGRDGKYAIAALFYEKYD 1529
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 69.3 bits (162), Expect = 5e-13
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 8/184 (4%)
Frame = -2
Query: 739 SATLPHEILEMTSKFM-TD--PIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 569
SAT+P ++ + + TD I L + T E + QF + + ++ F + L
Sbjct: 227 SATMPPKVSNVFRGILGTDFKLINCLDPNEPPTHERVPQFVIETKLDK-VFSSSLSLLQQ 285
Query: 568 LTIT----QAVIFCNTKRKVDWLTQKMQE-ANFTVSSMHGDMPQKERDNIMKEFRSGQSR 404
LT + + ++F T VD++ ++ +H + +R +I + FR QS
Sbjct: 286 LTSSNPSSRIIVFLPTISMVDFVGGVLENHLKIPCFILHSGLTTAQRRSITESFRKCQSG 345
Query: 403 VLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRIL 224
+L TDV ARG+D ++ V+ P+N + YIHRIGR+GR G+ G A + + L
Sbjct: 346 ILFATDVVARGMDFPNITQVVQITGPSNTDDYIHRIGRTGRAGKTGEAYLILLEQEKPFL 405
Query: 223 RDIE 212
I+
Sbjct: 406 NSIK 409
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 68.9 bits (161), Expect = 7e-13
Identities = 33/85 (38%), Positives = 49/85 (57%)
Frame = -2
Query: 490 NFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNREL 311
+F+ + + ER I+ F +G +L+ +D+ ARGIDV VINYD P +
Sbjct: 461 SFSCGLFTSSLSRDERKKIISRFATGDLNLLVCSDLMARGIDVANTQNVINYDPPLSVRS 520
Query: 310 YIHRIGRSGRFGRKGVAINFVKSDD 236
Y+HRIGR+ R GR+G A V+S +
Sbjct: 521 YVHRIGRTARAGREGFAWTLVQSHE 545
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 58.4 bits (135), Expect = 1e-09
Identities = 23/44 (52%), Positives = 35/44 (79%)
Frame = -2
Query: 379 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV 248
ARG+D + V+ V+N+D+P+N + YIHRIGR+ R G+ G A++FV
Sbjct: 387 ARGLDFENVACVLNFDMPSNTKSYIHRIGRTARAGKPGTAMSFV 430
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 55.2 bits (127), Expect = 1e-08
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = -2
Query: 550 VIFCNTKRKVDWLTQKMQ-EANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWAR 374
+I+C ++ + + K++ + H + + ER I E++SG ++++ T +
Sbjct: 746 IIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFGM 805
Query: 373 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 236
G+D V VI++ P + E Y GR+GR G+ I F D
Sbjct: 806 GVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYSYKD 851
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 48.0 bits (109), Expect = 1e-06
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = -2
Query: 460 MPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR 281
M QK ++ +K+F+ G+ LI T + G+D+ +V ++I YD + + R+GR+GR
Sbjct: 476 MSQKLQNETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYDASASPIRMLQRMGRTGR 535
Query: 280 FGRKG 266
RKG
Sbjct: 536 -KRKG 539
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 43.6 bits (98), Expect = 3e-05
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = -2
Query: 496 EANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNR 317
+AN S+ M QKE + +FR+G L+ T + G+D+ ++I YD ++
Sbjct: 506 QANSAYSTGMNQMQQKET---IDQFRAGVINTLVATSIGEEGLDIGDTDMIICYDASSSP 562
Query: 316 ELYIHRIGRSGR 281
I R+GR+GR
Sbjct: 563 IRTIQRMGRTGR 574
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = -2
Query: 454 QKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG 275
++++D + K F++G+ VLI T V GIDV +LVI +++ Y+ GR+
Sbjct: 410 RRQKDTLHK-FKTGKYNVLIATAVAEEGIDVPSCNLVIRFNICRTVTQYVQSRGRARAMA 468
Query: 274 RK 269
K
Sbjct: 469 SK 470
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 35.1 bits (77), Expect = 0.011
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = -2
Query: 481 VSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIH 302
+ S +ER I E +G+ +I T+ GID+ + VI P +
Sbjct: 587 IQSYRAGYTVQERRKIESEMFNGKLYGIIATNALELGIDIGSLDAVITIGFPYSLSNLRQ 646
Query: 301 RIGRSGRFGRKGVAINFVKS 242
+ GR+GR + +A+ V++
Sbjct: 647 QFGRAGRRNKSSLAVYIVET 666
>SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 606
Score = 30.7 bits (66), Expect = 0.23
Identities = 17/93 (18%), Positives = 39/93 (41%)
Frame = -2
Query: 559 TQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVW 380
+ ++FC + ++ ++ G+ ER+ ++++FR + VL+ V
Sbjct: 266 SSTLVFCINVEHSLKVCNAFRKLGIDARALFGETNDSERETLIQDFRKKKFPVLVNCMVL 325
Query: 379 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR 281
G D+ + ++ ++ L IGR R
Sbjct: 326 TEGTDIPNIDCLMIARPTSSPNLLTQMIGRGLR 358
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 28.7 bits (61), Expect = 0.95
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -2
Query: 745 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 566
LIS TL + + F+ D + L K D+ +EG ++++ E+ + C LY TL
Sbjct: 1024 LISLTLKDSDVCVIYNFVDDLVIFLKKCDKTLIEGFVLPILSIKIEKSLYKGFCYLYLTL 1083
Query: 565 TI 560
+
Sbjct: 1084 KV 1085
>SPAC25A8.01c ||snf2SR|fun thirty related protein
Fft3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 922
Score = 28.7 bits (61), Expect = 0.95
Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Frame = -2
Query: 556 QAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSR--VLITTDV 383
+ V+F + +D L M+ N G R +++ +F + +S L++T
Sbjct: 779 RVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLIDQFYADESINVFLLSTKA 838
Query: 382 WARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKG--VAINFVKSDDI 233
GI++ ++VI YD+ N + R+ R G+K FV D I
Sbjct: 839 GGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTI 890
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 260 GDTLTTESTRSTNSVNVQLTIVGQVIVYNQGYLLDINASCPDVSCNENTALTRTEFLHNV 439
G T+ T+ R + + + + GQ+I +N +L+ P V+C NT + +T L +
Sbjct: 143 GQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACG-NTIILKTAELTPL 201
Query: 440 VSLFL 454
+L L
Sbjct: 202 SALCL 206
>SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 414
Score = 27.1 bits (57), Expect = 2.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 536 ITKYYCLGNCQCIIEVTKCVK 598
+ ++ CL NC + +TKCVK
Sbjct: 139 LEEFSCLANCNGLRTITKCVK 159
>SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein
Utp5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 666
Score = 26.6 bits (56), Expect = 3.8
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +2
Query: 188 IYLSRVVLFNVSQDPDVI*FNEVDGDTLTTE----STRSTNSVNVQLTIVGQVIVYNQGY 355
+Y S + ++S +++ G+ L S T S + I+G ++ N G+
Sbjct: 75 LYASEQITTDISGSGEILVLGTNSGEILIYSEHLGSLTRTYSFGILQKIIGAHVLANDGF 134
Query: 356 LLDINASCPDVSCNENTALTRTEF 427
+DI V + NT RT F
Sbjct: 135 AIDITGKV--VCFSVNTGEVRTSF 156
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -2
Query: 211 QYYSTQIDEMPMNVADLI*LCLYCVHYLCVEWIFC 107
Q+Y+ + E + + L+ +CL+ VHYL E + C
Sbjct: 463 QFYALRYREDNEH-SGLVRICLFIVHYLSCEKVLC 496
>SPAC1786.01c ||SPAC31G5.20c|triacylglycerol
lipase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -2
Query: 610 EEWKFDTLCDLYDTLTITQAVIFCNTKRK--VDW 515
+EWK D + D YD T+ QAV K + DW
Sbjct: 143 DEWKLDPVYDYYD-YTLVQAVYSSLVKHREQKDW 175
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 598 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHG 464
F +C +Y ++T + ++ TKR L + ANFT +S G
Sbjct: 457 FSLVCVVYYSITPLRNLVGFTTKRSGKNLANRFFTANFTPTSKTG 501
>SPAC821.05 |||translation initiation factor
eIF3h|Schizosaccharomyces pombe|chr 1|||Manual
Length = 357
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 461 VTVH*ADSEICLLHLLCEPVNLPLCITKYYCLGNCQCIIEVTK 589
+ +H + CLLH L EP +T L +C+ + +T+
Sbjct: 192 IVIHNSHLATCLLHSLSEPPTPASTLTAEAALEDCESNLPLTE 234
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -2
Query: 694 MTDPIRILVKRDELTLEGIKQFFVAVEREEW 602
+TDP R V++++LT G+ + A + + W
Sbjct: 65 LTDPARNFVEKEDLTALGVNVYNNADDWKNW 95
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 25.4 bits (53), Expect = 8.8
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -2
Query: 601 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMP---QKERDNIM 431
K D + +++T A F K+K D ++ N T S+H + E++N
Sbjct: 99 KNDISTKVASKVSVTMATKFAEKKKKQDRENVDSKDNNITNFSLHRSFSASGKMEKNNSF 158
Query: 430 KEFRSGQSRV 401
KE + +S +
Sbjct: 159 KEVSTSKSYI 168
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,196,528
Number of Sequences: 5004
Number of extensions: 67624
Number of successful extensions: 193
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 361294920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -