Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_H12
(655 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr 3... 132 6e-32
SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces pomb... 92 7e-20
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 29 0.44
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 29 0.44
SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3 |Schiz... 28 1.4
SPAC227.14 |||nicotinamide riboside kinase|Schizosaccharomyces p... 27 1.8
SPBC16D10.10 |||tRNA specific adenosine deaminase subunit Tad2 |... 27 1.8
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 3.1
SPAC3G9.09c |tif211||translation initiation factor eIF2 alpha su... 27 3.1
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 3.1
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 27 3.1
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 27 3.1
SPBC800.08 |gcd10||translation initiation factor eIF-3 gamma sub... 26 4.1
SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces ... 26 5.5
SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subu... 26 5.5
SPCC18.07 |rpc53||DNA-directed RNA polymerase III complex subuni... 26 5.5
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 5.5
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 26 5.5
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 25 7.2
SPAC1002.07c |ats1||N-acetyltransferase Ats1 |Schizosaccharomyce... 25 7.2
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 25 9.5
SPCC188.06c |srp54||signal recognition particle subunit Srp54|Sc... 25 9.5
SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex ... 25 9.5
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 9.5
>SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 191
Score = 132 bits (318), Expect = 6e-32
Identities = 70/186 (37%), Positives = 111/186 (59%), Gaps = 5/186 (2%)
Frame = -2
Query: 585 IVWVLGGPGSGKGTQCDKIVAKYG-FTHLSTGDLLRAEV-KSGSERAKCLTAIMERGELV 412
+++VLGGPG+GKGTQCD++ K+ F H+S GD LR E + GS+ + ++ G++V
Sbjct: 4 VIFVLGGPGAGKGTQCDRLAEKFDKFVHISAGDCLREEQNRPGSKYGNLIKEYIKDGKIV 63
Query: 411 PNEIVLDLLKEAILARAEES-KGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLT 235
P EI + LL+ + ++ FLIDG+PRE Q FE+++ P +YF ET+
Sbjct: 64 PMEITISLLETKMKECHDKGIDKFLIDGFPREMDQCEGFEKSVCPAKFALYFRCGQETML 123
Query: 234 QRLLGRAASSGRADDNEETIKLRLKTFLDNNDLVL--AQYPDKLRRINAERPVDEIFAEV 61
+RL+ R +SGR+DDN E+IK R T+ + V+ + ++L I+AE+ D +F +
Sbjct: 124 KRLIHRGKTSGRSDDNIESIKKRFVTYTKASMPVVEYLKSQNRLITIDAEQDPDAVFEDT 183
Query: 60 QSILDP 43
L P
Sbjct: 184 VKALQP 189
>SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 91.9 bits (218), Expect = 7e-20
Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 4/129 (3%)
Frame = -2
Query: 576 VLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEIV 397
++G PG+GKGTQ I KYG HL+TGD+LR++V +E K IM++G LV ++IV
Sbjct: 8 LVGPPGAGKGTQAPNIQKKYGIAHLATGDMLRSQVARQTELGKEAKKIMDQGGLVSDDIV 67
Query: 396 LDLLKEAILARAEESKGFLIDGYPREKSQG----IAFEENIAPVSVIIYFEASSETLTQR 229
++K+ IL E GF++DG+PR Q +E ++ ++ + E L +R
Sbjct: 68 TGMIKDEILNNPECKNGFILDGFPRTVVQAEKLTALLDELKLDLNTVLELQVDDELLVRR 127
Query: 228 LLGRAASSG 202
+ GR G
Sbjct: 128 ITGRLVHPG 136
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 29.5 bits (63), Expect = 0.44
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -2
Query: 615 MAPIDTSKKPI--VWVLGGP-GSGKGTQCDKIVAKYGFTHLSTGDL 487
+ PI+ + +P V+V+ GP GSGK T + K GF ++ DL
Sbjct: 3 VTPINPTNQPYKYVFVVIGPAGSGKTTMAKAVSEKLGFEYIEGDDL 48
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 29.5 bits (63), Expect = 0.44
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -2
Query: 597 SKKPIVWVLGGPGSGKGTQCDKIVAKYGFT 508
SK I+ +LG GSGK TQ + +A+ G+T
Sbjct: 524 SKNQILVLLGETGSGKTTQITQYLAEEGYT 553
>SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 900
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 153 LDNNDLVLAQYPDKLRRINAERPVDEIFAEV 61
++NN LV+A DKL ++ ERP D I E+
Sbjct: 57 VENNILVMALTSDKLMIVDLERPEDIIDIEL 87
>SPAC227.14 |||nicotinamide riboside kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 235
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 594 KKPIVWVLGGPGSGKGTQCDKIVAK 520
++ ++ + GGPGSGK T C I+AK
Sbjct: 28 QRVLIGLAGGPGSGKSTLC-AILAK 51
>SPBC16D10.10 |||tRNA specific adenosine deaminase subunit Tad2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 27.5 bits (58), Expect = 1.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 603 DTSKKPIVWVLGGPGSGKGTQCDKIVAK 520
D+ K I+ + GGP SGK C++++ +
Sbjct: 4 DSVKSAIIGIAGGPFSGKTQLCEQLLER 31
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.6 bits (56), Expect = 3.1
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = -2
Query: 309 GIAFEENIAPVSVIIYFEASSETLTQRLLGRAASSGRADDNEETIKLRLKTFLDNNDLVL 130
GI+F+ A V+ YF+ S T T +LGR A + + D E L ++ L L
Sbjct: 2561 GISFDSTKAVAPVLTYFDFCSLT-TGNILGRIALAFTSID--ENANLESANIFEHARLAL 2617
Query: 129 AQY 121
Q+
Sbjct: 2618 LQH 2620
>SPAC3G9.09c |tif211||translation initiation factor eIF2 alpha
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 306
Score = 26.6 bits (56), Expect = 3.1
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = -2
Query: 288 IAPVSVIIYFEASSETL----TQRLLGRAASSGRADDNEETIKLRLKTFLDNNDLVLAQY 121
+AP ++ A ++L + +G S A + T+K++ K + ++L LA
Sbjct: 224 VAPPLYVLLTNALDKSLGLKKLEEAIGAIEKSITASNGTCTVKMKPKAVSETDELELADL 283
Query: 120 PDKLRRINAERPVDE 76
K + NAE DE
Sbjct: 284 MKKFEKENAEISGDE 298
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 3.1
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = -3
Query: 545 HNATRSSPNTGSLTSRLETCSGLKSKAARRGRNALPLLWKE--ASLSLMKSSWIC*KKRS 372
++ T +SP + SLTS T S L S + A + AS S+ SS S
Sbjct: 97 NSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTS 156
Query: 371 WPVLKNPKASSSTATLARSHRVSLLKRTS 285
+ + S+++AT S S L T+
Sbjct: 157 SSLASSSTNSTTSATPTSSATSSSLSSTA 185
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 609 PIDTSKKPIVWVLGGPGSGKGTQCDKIVAKY 517
P + IV V+G PG+GK T +V +Y
Sbjct: 68 PDEAPPPVIVAVMGPPGTGKSTLIKSLVRRY 98
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 162 KTFLDNNDLVLAQYPDKLRRINAERPVDEIFAE 64
+TF D + L + +KL+++NA+ D++ E
Sbjct: 1865 ETFTDEDGQALRSFSEKLQKLNAKNSKDDLCIE 1897
>SPBC800.08 |gcd10||translation initiation factor eIF-3 gamma
subunit Gcd10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 462
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +1
Query: 61 YLREDLIHR----TFRVYPPEFVRVLSQYEVVVVQE 156
+L +DL + TF +Y P+ +RVL EV ++E
Sbjct: 42 FLADDLFGKHFDETFEIYQPKKIRVLKTREVQYIEE 77
>SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 805
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = -2
Query: 177 IKLRLKTFLDNNDLVLAQYPDKLRRINAERPVDEIFAEVQSILDPL 40
++ R++ ++++ L+ A+Y +L N D F++ + +DPL
Sbjct: 82 LEARVRQLVESSQLLEARYLQQLEFANVLTKADAFFSKSGNTVDPL 127
>SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subunit
Rpc82 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 591
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 494 ETCSGLKSKAARRGRNALPLLWKEASL 414
+ CS + S R GR +P+L K SL
Sbjct: 19 DCCSAVASALLRHGRLTIPMLQKRTSL 45
>SPCC18.07 |rpc53||DNA-directed RNA polymerase III complex subunit
Rpc53|Schizosaccharomyces pombe|chr 3|||Manual
Length = 330
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 144 NDLVLAQYPDKLRRINAERPVDEIF 70
+ +VL Q+PDKL R + VD ++
Sbjct: 196 DQMVLMQFPDKLPRFMGDADVDPVW 220
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = -2
Query: 132 LAQYPDKLRRINAERPVDEIFAEVQSILD 46
L++ ++L N++RP +IF + Q+I++
Sbjct: 1339 LSELKERLNASNSDRPSPDIFKDTQAIMN 1367
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 30 LTRPAGPGSTVPPRRSHP 83
L+RP PG PP+R+ P
Sbjct: 492 LSRPPSPGIVTPPQRTSP 509
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -2
Query: 549 GTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEI--VLDLLKEA 376
G +KI++ + + S K R++C ++ GEL+PN + + D L+
Sbjct: 589 GVVLEKIISAVTYDNTSASYGFSDVQKINEMRSRCCFELVRLGELMPNPLMNIFDQLQSI 648
Query: 375 I 373
I
Sbjct: 649 I 649
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 306 IAFEENIAPVSVIIYFEASSETLTQRLLGRAASSGR 199
+A +EN+ P + EAS+ + + LL R +SGR
Sbjct: 1145 LANQENLVPAFFNKFREASTLKIQKALLTRLLNSGR 1180
>SPAC1002.07c |ats1||N-acetyltransferase Ats1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 168
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -2
Query: 381 EAILARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRL 226
EA + E + GF+ + P + G+ EEN P + IYF + T T R+
Sbjct: 35 EATIPNLEVAFGFIDEVTP--VAYGVFIEENDQPAGMAIYF-LNFSTWTSRV 83
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -2
Query: 588 PIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLR 481
P + + G PG+GK T +++ ++ GD+++
Sbjct: 9 PNIIICGTPGTGKTTLAEQVAETTELENICIGDVVK 44
>SPCC188.06c |srp54||signal recognition particle subunit
Srp54|Schizosaccharomyces pombe|chr 3|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 585 IVWVLGGPGSGKGTQCDKIVAKY 517
++ ++G GSGK T C K+ Y
Sbjct: 103 VIMMVGLQGSGKTTTCSKLALHY 125
>SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex
subunit Orp3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -2
Query: 540 CDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPN 406
C I+ L+ D L + +G++ KCL E EL+ N
Sbjct: 414 CQAILRMNSTKALACLDYLNENIFTGNQTMKCLEIHQELSELIRN 458
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 261 FEASSETLTQRLLGRAASSGRADDNEETIKLRLKTF 154
F + R+ GR++ + +DD++ETI L T+
Sbjct: 965 FRRPYSVIPSRMTGRSSFTQLSDDSDETIILASATY 1000
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,540,238
Number of Sequences: 5004
Number of extensions: 49832
Number of successful extensions: 174
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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