Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_H09
         (790 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...   132   3e-33
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.2  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   3.2  

>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score =  132 bits (320), Expect = 3e-33
 Identities = 65/117 (55%), Positives = 78/117 (66%)
 Frame = -1

Query: 460 LTREIDGFVLNRIQYAILDEVWRLXXXXXXXXXXXXXVMSEGLGMRYAFLGALETAHLNA 281
           LTREIDGFVLNRIQYAIL+E WRL             VMSEGLGMRYAFLGA E AHLNA
Sbjct: 1   LTREIDGFVLNRIQYAILNEAWRLVADGILNAKDVDAVMSEGLGMRYAFLGAFEAAHLNA 60

Query: 280 EGMQSYIDRYGETIYRVSNEMGPAPRMTTNKSRNSVCEQLEKLVPIEKLQDRRNWRD 110
           EGM+ Y + Y  +IY VS   GP P+    +    +  +L ++ P+EKL++RR WRD
Sbjct: 61  EGMKKYCETYKNSIYDVSMTFGPVPKF-EGEMAEKISNELNEMCPLEKLKERRIWRD 116


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 326 HSKSFRHNFINIRYINNFVVN 388
           H     HN++N   ++ FVVN
Sbjct: 527 HEVDLVHNYMNFMQMDEFVVN 547


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 326 HSKSFRHNFINIRYINNFVVN 388
           H     HN++N   ++ FVVN
Sbjct: 527 HEVDLVHNYMNFMQMDEFVVN 547


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 160  PIVRTPSFCFYLSSYAEPVPFHC 228
            P+V   S C  + + ++P  FHC
Sbjct: 1707 PVVSCASGCTAVETKSKPYKFHC 1729


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 326 HSKSFRHNFINIRYINNFVVN 388
           H     HN++N   ++ FVVN
Sbjct: 153 HEVDLVHNYMNFMQMDEFVVN 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,969
Number of Sequences: 438
Number of extensions: 4568
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)