Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_H04
         (806 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   258   1e-70
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    27   0.68 
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           26   1.6  
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        25   3.6  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   6.3  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.4  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  258 bits (633), Expect = 1e-70
 Identities = 120/165 (72%), Positives = 143/165 (86%)
 Frame = -1

Query: 578 LADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDV 399
           LADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MV KWQTLIE ++DV
Sbjct: 71  LADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDV 130

Query: 398 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 219
           KTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM  II R++T+++L+ VV K
Sbjct: 131 KTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEK 190

Query: 218 LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 84
           L+PDSIAKDIEKAC  +YPL DV IRKVKVLK+PRF++S LMELH
Sbjct: 191 LLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELH 235



 Score = 95.5 bits (227), Expect = 2e-21
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = -3

Query: 729 IVDPFTRKDWYDVKAPXMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVS 580
           +VDPFTRKDWYDVKAP MF  RQ G TLVNRTQGTKIAS+GLKGRVFEVS
Sbjct: 21  VVDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVS 70



 Score = 25.4 bits (53), Expect = 2.1
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -2

Query: 37  RPEGYEPPV 11
           RPEGYEPPV
Sbjct: 257 RPEGYEPPV 265


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 27.1 bits (57), Expect = 0.68
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 168 LPSARCLHPKGESVEEAPFRDLEVDGTS 85
           +P   C H  G ++E+A    LE DGT+
Sbjct: 557 MPPKGCSHDDGPALEKAQLYQLESDGTA 584


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = -1

Query: 578 LADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 423
           LA+L A +D  E    ++  I + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 183 LAELAASSDTLEHLNLQYNFIYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = -1

Query: 578 LADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 423
           LA+L A +D  E    ++  + + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 108 LAELAASSDTLEHLNLQYNFMYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +3

Query: 138 LSDANIAQRVDAMAGLLDVLGNGVRNQLV 224
           L+ AN  QR++    L D++G+  RN+++
Sbjct: 560 LAIANALQRINTPKYLYDIIGDYFRNRVL 588


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = +2

Query: 113 NGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSP 229
           NG    +   G  H   G    RPSR    ++  S C P
Sbjct: 146 NGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASPSICRP 184


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 838,741
Number of Sequences: 2352
Number of extensions: 18728
Number of successful extensions: 44
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)