Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_H04
(806 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 258 8e-69
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 258 8e-69
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 258 8e-69
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 246 2e-65
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 198 1e-50
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 182 5e-46
AY089340-1|AAL90078.1| 790|Drosophila melanogaster AT15733p pro... 29 7.5
AE013599-3474|AAM71125.1| 790|Drosophila melanogaster CG3622-PA... 29 7.5
AE013599-3473|AAF46905.1| 1091|Drosophila melanogaster CG3622-PB... 29 7.5
AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-P... 29 9.9
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 258 bits (631), Expect = 8e-69
Identities = 122/165 (73%), Positives = 140/165 (84%)
Frame = -1
Query: 578 LADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDV 399
LADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++
Sbjct: 71 LADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEA 130
Query: 398 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 219
KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNK
Sbjct: 131 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNK 190
Query: 218 LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 84
L DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH
Sbjct: 191 LALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELH 235
Score = 88.2 bits (209), Expect = 1e-17
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = -3
Query: 729 IVDPFTRKDWYDVKAPXMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVS 580
+VDPF+RKDWYDVKAP MF RQ+G TLVNRTQG +IAS+ LKGRVFEVS
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVS 70
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 258 bits (631), Expect = 8e-69
Identities = 122/165 (73%), Positives = 140/165 (84%)
Frame = -1
Query: 578 LADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDV 399
LADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++
Sbjct: 21 LADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEA 80
Query: 398 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 219
KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNK
Sbjct: 81 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNK 140
Query: 218 LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 84
L DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH
Sbjct: 141 LALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELH 185
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 258 bits (631), Expect = 8e-69
Identities = 122/165 (73%), Positives = 140/165 (84%)
Frame = -1
Query: 578 LADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDV 399
LADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++
Sbjct: 71 LADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEA 130
Query: 398 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 219
KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNK
Sbjct: 131 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNK 190
Query: 218 LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 84
L DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH
Sbjct: 191 LALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELH 235
Score = 88.2 bits (209), Expect = 1e-17
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = -3
Query: 729 IVDPFTRKDWYDVKAPXMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVS 580
+VDPF+RKDWYDVKAP MF RQ+G TLVNRTQG +IAS+ LKGRVFEVS
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVS 70
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 246 bits (603), Expect = 2e-65
Identities = 118/164 (71%), Positives = 136/164 (82%), Gaps = 1/164 (0%)
Frame = -1
Query: 572 DLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKT 393
DLQ D D E SFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT
Sbjct: 74 DLQKDIDPEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKT 133
Query: 392 TDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRK-KMCEIITRDVTNSELREVVNKL 216
DGY+LRVFCIGFT KD SQRKTCYA +QVR IR +M +IIT +V+ ++L+++VNKL
Sbjct: 134 VDGYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTDIITNEVSGADLKQLVNKL 193
Query: 215 IPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 84
DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH
Sbjct: 194 ALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELH 237
Score = 86.6 bits (205), Expect = 4e-17
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = -3
Query: 729 IVDPFTRKDWYDVKAPXMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVS 580
+VDPF+RKDWYDVKAP MF RQ+G TLVNRTQG +IAS+ KGRVFEVS
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVS 70
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 198 bits (482), Expect = 1e-50
Identities = 92/130 (70%), Positives = 110/130 (84%)
Frame = -1
Query: 473 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 294
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 293 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 114
IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PR
Sbjct: 61 KIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPR 120
Query: 113 FEISKLMELH 84
F++SKL+ELH
Sbjct: 121 FDVSKLLELH 130
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 182 bits (443), Expect = 5e-46
Identities = 85/118 (72%), Positives = 99/118 (83%)
Frame = -1
Query: 578 LADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDV 399
LADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++
Sbjct: 71 LADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEA 130
Query: 398 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVV 225
KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L++++
Sbjct: 131 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLL 188
Score = 88.2 bits (209), Expect = 1e-17
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = -3
Query: 729 IVDPFTRKDWYDVKAPXMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVS 580
+VDPF+RKDWYDVKAP MF RQ+G TLVNRTQG +IAS+ LKGRVFEVS
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVS 70
>AY089340-1|AAL90078.1| 790|Drosophila melanogaster AT15733p
protein.
Length = 790
Score = 29.1 bits (62), Expect = 7.5
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -2
Query: 634 PGNENCFGRIEGKSFRSFPWLIYKLTLTRKGLSANSD*SPNMCKDVMCSATSTAWTSQPI 455
P + GR+ G+ F + + L + + A++ +C+D+ C WTS P
Sbjct: 205 PWDHTAGGRLPGERFNANQQCM--LRFGKNFMQASTQSKMEICRDLHCRQDGLPWTSHPA 262
Query: 454 SSG 446
G
Sbjct: 263 LEG 265
>AE013599-3474|AAM71125.1| 790|Drosophila melanogaster CG3622-PA,
isoform A protein.
Length = 790
Score = 29.1 bits (62), Expect = 7.5
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -2
Query: 634 PGNENCFGRIEGKSFRSFPWLIYKLTLTRKGLSANSD*SPNMCKDVMCSATSTAWTSQPI 455
P + GR+ G+ F + + L + + A++ +C+D+ C WTS P
Sbjct: 205 PWDHTAGGRLPGERFNANQQCM--LRFGKNFMQASTQSKMEICRDLHCRQDGLPWTSHPA 262
Query: 454 SSG 446
G
Sbjct: 263 LEG 265
>AE013599-3473|AAF46905.1| 1091|Drosophila melanogaster CG3622-PB,
isoform B protein.
Length = 1091
Score = 29.1 bits (62), Expect = 7.5
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -2
Query: 634 PGNENCFGRIEGKSFRSFPWLIYKLTLTRKGLSANSD*SPNMCKDVMCSATSTAWTSQPI 455
P + GR+ G+ F + + L + + A++ +C+D+ C WTS P
Sbjct: 506 PWDHTAGGRLPGERFNANQQCM--LRFGKNFMQASTQSKMEICRDLHCRQDGLPWTSHPA 563
Query: 454 SSG 446
G
Sbjct: 564 LEG 566
>AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-PA
protein.
Length = 632
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +3
Query: 141 SDANIAQRVDAMAGLLDVLGNGVRNQLVHHLPEFRVSDVACNDFTHFLSDC 293
+ AN+ M LLD++ GV L+H E V + ++DC
Sbjct: 264 TSANVTADYLNMTNLLDLVSQGVYETLIHSFTEITTKFVVSYSYPIGINDC 314
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,314,597
Number of Sequences: 53049
Number of extensions: 800799
Number of successful extensions: 2375
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2374
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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