BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_H03
(664 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein. 31 0.032
AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein. 31 0.032
AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein. 31 0.032
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 31 0.032
AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein. 30 0.075
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 24 3.7
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 24 3.7
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 24 4.9
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 24 4.9
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 24 4.9
DQ370040-1|ABD18601.1| 121|Anopheles gambiae putative TIL domai... 23 6.5
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 23 6.5
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 23 6.5
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 23 6.5
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 23 8.6
>AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 31.1 bits (67), Expect = 0.032
Identities = 18/76 (23%), Positives = 40/76 (52%)
Frame = -2
Query: 450 DLKDVTQDVHYENFRAQCISQISQHAMRERGKLKRDSMGNNNDVVITDTDRLLLQKDEEI 271
D+ + ++ + N A I++ + MR+ +L +++G N ++ T DR LQK++ +
Sbjct: 153 DIDKIKKEANQYNREADRIAEDLANKMRDHAQLL-ENVGTNIELAETLLDRASLQKEDAV 211
Query: 270 RRMQDMLTQMQQKLKA 223
++ + +Q KA
Sbjct: 212 DALKQLKYAKEQAEKA 227
>AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 31.1 bits (67), Expect = 0.032
Identities = 18/76 (23%), Positives = 40/76 (52%)
Frame = -2
Query: 450 DLKDVTQDVHYENFRAQCISQISQHAMRERGKLKRDSMGNNNDVVITDTDRLLLQKDEEI 271
D+ + ++ + N A I++ + MR+ +L +++G N ++ T DR LQK++ +
Sbjct: 153 DIDKIKKEANQYNREADRIAEDLANKMRDHAQLL-ENVGTNIELAETLLDRASLQKEDAV 211
Query: 270 RRMQDMLTQMQQKLKA 223
++ + +Q KA
Sbjct: 212 DALKQLKYAKEQAEKA 227
>AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 31.1 bits (67), Expect = 0.032
Identities = 18/76 (23%), Positives = 40/76 (52%)
Frame = -2
Query: 450 DLKDVTQDVHYENFRAQCISQISQHAMRERGKLKRDSMGNNNDVVITDTDRLLLQKDEEI 271
D+ + ++ + N A I++ + MR+ +L +++G N ++ T DR LQK++ +
Sbjct: 153 DIDKIKKEANQYNREADRIAEDLANKMRDHAQLL-ENVGTNIELAETLLDRASLQKEDAV 211
Query: 270 RRMQDMLTQMQQKLKA 223
++ + +Q KA
Sbjct: 212 DALKQLKYAKEQAEKA 227
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 31.1 bits (67), Expect = 0.032
Identities = 18/76 (23%), Positives = 40/76 (52%)
Frame = -2
Query: 450 DLKDVTQDVHYENFRAQCISQISQHAMRERGKLKRDSMGNNNDVVITDTDRLLLQKDEEI 271
D+ + ++ + N A I++ + MR+ +L +++G N ++ T DR LQK++ +
Sbjct: 1292 DIDKIKKEANQYNREADRIAEDLANKMRDHAQLL-ENVGTNIELAETLLDRASLQKEDAV 1350
Query: 270 RRMQDMLTQMQQKLKA 223
++ + +Q KA
Sbjct: 1351 DALKQLKYAKEQAEKA 1366
>AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 29.9 bits (64), Expect = 0.075
Identities = 18/76 (23%), Positives = 39/76 (51%)
Frame = -2
Query: 450 DLKDVTQDVHYENFRAQCISQISQHAMRERGKLKRDSMGNNNDVVITDTDRLLLQKDEEI 271
D+ + ++ + N A I++ MR+ +L +++G N ++ T DR LQK++ +
Sbjct: 153 DIDKIKKEANQYNREADRIAEDLATKMRDHAQLL-ENVGTNIELAETLLDRASLQKEDAV 211
Query: 270 RRMQDMLTQMQQKLKA 223
++ + +Q KA
Sbjct: 212 DALKQLKYAKEQAEKA 227
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.2 bits (50), Expect = 3.7
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 341 LWVTTTTWSSPTLIDSCSKKTK 276
+W TTWS+PT + S + +
Sbjct: 158 IWTDPTTWSAPTTTTTWSDQPR 179
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.2 bits (50), Expect = 3.7
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 341 LWVTTTTWSSPTLIDSCSKKTK 276
+W TTWS+PT + S + +
Sbjct: 158 IWTDPTTWSAPTTTTTWSDQPR 179
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 4.9
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 341 LWVTTTTWSSPT 306
+W TTWS+PT
Sbjct: 158 IWTDPTTWSAPT 169
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 4.9
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 341 LWVTTTTWSSPT 306
+W TTWS+PT
Sbjct: 158 IWTDPTTWSAPT 169
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 4.9
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 341 LWVTTTTWSSPT 306
+W TTWS+PT
Sbjct: 158 IWTDPTTWSAPT 169
>DQ370040-1|ABD18601.1| 121|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 121
Score = 23.4 bits (48), Expect = 6.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 43 DTIVCFSPDVVY 8
DTIVC+ P+ VY
Sbjct: 56 DTIVCYDPNEVY 67
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.4 bits (48), Expect = 6.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 341 LWVTTTTWSSPT 306
+W TTWS+PT
Sbjct: 157 VWTDPTTWSAPT 168
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.4 bits (48), Expect = 6.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 341 LWVTTTTWSSPT 306
+W TTWS+PT
Sbjct: 157 VWTDPTTWSAPT 168
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 23.4 bits (48), Expect = 6.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 341 LWVTTTTWSSPT 306
+W TTWS+PT
Sbjct: 158 VWTDPTTWSAPT 169
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 23.0 bits (47), Expect = 8.6
Identities = 12/56 (21%), Positives = 25/56 (44%)
Frame = -2
Query: 561 GKRVRGRQYPWGIVDVENPRHSDFTKLRTMLISTHMQDLKDVTQDVHYENFRAQCI 394
GK+ R ++ + V ++ + T +STH L+ + D ++F Q +
Sbjct: 248 GKQTRAGEHNGPVKPVPRRPKTEAILVETTEVSTHKDILRKLKADPELQSFGKQVV 303
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,436
Number of Sequences: 2352
Number of extensions: 10463
Number of successful extensions: 29
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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