Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_G21
         (620 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0517 + 29981537-29981927,29982024-29982231,29982373-299825...    28   6.9  

>01_06_0517 +
           29981537-29981927,29982024-29982231,29982373-29982544,
           29984468-29984533,29984658-29984771,29984880-29984996,
           29985097-29985223,29985317-29985603,29985701-29985891,
           29985981-29986063,29986175-29986251,29986729-29986896
          Length = 666

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -1

Query: 251 FTILNLASVTTSLQLRTSPNHPGS*KY*AGFHLKTNLSSIISLFCIIV 108
           F I+N+A   TS  L T P    +  + AG   KT +S+++   CI++
Sbjct: 382 FGIMNIAGSFTSCYLTTGPFSKSAVNFHAG--CKTPMSNVVMSVCIML 427


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,024,458
Number of Sequences: 37544
Number of extensions: 253769
Number of successful extensions: 418
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)