Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_G21
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113564-1|AAM29569.1|  179|Drosophila melanogaster RH09246p pro...    30   2.9  
AY071743-1|AAL49365.2|  198|Drosophila melanogaster RH48588p pro...    30   2.9  
AE013599-3623|AAM68253.1|  179|Drosophila melanogaster CG30185-P...    30   2.9  
BT012668-1|AAT08474.1|  119|Drosophila melanogaster RE50359p pro...    29   6.7  

>AY113564-1|AAM29569.1|  179|Drosophila melanogaster RH09246p
           protein.
          Length = 179

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = -3

Query: 297 TLENISGSNGGTEFVFHNIKFSVSHDQPAVKDKPESSRLLKILSRFSFENQFIFNNFIVL 118
           T +N   S      V+  I+FSV +  P  KDK  S +LL   ++      ++  +FI L
Sbjct: 57  TAQNSRASREVEAQVYQWIEFSVLYVAPGSKDKYVSKQLLADFNKLFASKSYLVGHFITL 116


>AY071743-1|AAL49365.2|  198|Drosophila melanogaster RH48588p
           protein.
          Length = 198

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = -3

Query: 297 TLENISGSNGGTEFVFHNIKFSVSHDQPAVKDKPESSRLLKILSRFSFENQFIFNNFIVL 118
           T +N   S      V+  I+FSV +  P  KDK  S +LL   ++      ++  +FI L
Sbjct: 76  TAQNSRASREVEAQVYQWIEFSVLYVAPGSKDKYVSKQLLADFNKLFASKSYLVGHFITL 135


>AE013599-3623|AAM68253.1|  179|Drosophila melanogaster CG30185-PA
           protein.
          Length = 179

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = -3

Query: 297 TLENISGSNGGTEFVFHNIKFSVSHDQPAVKDKPESSRLLKILSRFSFENQFIFNNFIVL 118
           T +N   S      V+  I+FSV +  P  KDK  S +LL   ++      ++  +FI L
Sbjct: 57  TAQNSRASREVEAQVYQWIEFSVLYVAPGSKDKYVSKQLLADFNKLFASKSYLVGHFITL 116


>BT012668-1|AAT08474.1|  119|Drosophila melanogaster RE50359p
           protein.
          Length = 119

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/46 (30%), Positives = 28/46 (60%)
 Frame = -3

Query: 237 FSVSHDQPAVKDKPESSRLLKILSRFSFENQFIFNNFIVLYYCTVN 100
           F++++ + A+  +  +SR+++ LS F     FIF  F+++ YC  N
Sbjct: 56  FNINNFKTAISMQRLNSRVIRNLSYFQANYVFIF--FVLMIYCLYN 99


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,944,423
Number of Sequences: 53049
Number of extensions: 474195
Number of successful extensions: 828
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)