Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_G21
         (620 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.79 
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    22   4.2  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   5.5  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 528 NPTSNL*VSLVQHELHVSSVL 466
           NP S+L  SL  H  H+SS L
Sbjct: 274 NPNSSLQPSLASHHSHLSSAL 294


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 13/59 (22%), Positives = 26/59 (44%)
 Frame = +1

Query: 244 IVKYKFRATI*T*NIL*SGNNNCTTFKPNRKNDVLMQRFRNNLMTCH*NIIRVILKVNP 420
           +  YK    +    +  +G +N T +     ND+  +++  N  T +  I +  +K NP
Sbjct: 128 VADYKIEGKVLLLPVRGAGKSNITMYDLKSHNDIYCEKYEKNGET-YLRIKKHAVKFNP 185


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 5/26 (19%)
 Frame = +1

Query: 88  YLLFIYCT-----IIQNNEIIEDKLV 150
           Y  FI C      IIQN+EI  DKLV
Sbjct: 75  YSCFITCALEKSHIIQNDEIQLDKLV 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,438
Number of Sequences: 438
Number of extensions: 3454
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)