Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_G19
(816 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31569| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 7e-15
SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32) 41 0.001
SB_59445| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.091
SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22) 34 0.12
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 33 0.21
SB_55962| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.64
SB_762| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_48470| Best HMM Match : HNOB (HMM E-Value=0) 30 2.6
SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_22018| Best HMM Match : VKOR (HMM E-Value=5.9) 29 3.4
SB_51303| Best HMM Match : WD40 (HMM E-Value=3.5e-40) 29 3.4
SB_43342| Best HMM Match : F-box (HMM E-Value=4.1e-09) 29 4.5
SB_35370| Best HMM Match : Ank (HMM E-Value=4.8e-06) 29 4.5
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_9416| Best HMM Match : WD40 (HMM E-Value=0) 29 4.5
SB_57418| Best HMM Match : WD40 (HMM E-Value=4.5e-15) 29 4.5
SB_28310| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22) 28 7.9
SB_34467| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_31569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 78.2 bits (184), Expect = 7e-15
Identities = 37/91 (40%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Frame = -3
Query: 379 VIKLKTEYLPFLGCSWITNNSLIVAGHSCIPLLYCHDGDD-IKYVAKLDNTQRKE-SGGL 206
V+ ++T+ LP + C WIT NS++ AGH+ +P L+ HD +D + + KLD ++KE SG +
Sbjct: 3 VVTIQTDLLPLMQCIWITENSIVAAGHNNMPYLFTHDDNDKLTLIGKLDAPKKKEDSGAI 62
Query: 205 SAMKKFQSLDRHAR-IETSDTFLDSIHQNAI 116
SAM KF+SLD+ + E + ++ H+N+I
Sbjct: 63 SAMAKFRSLDKQGQSAEEGVSSSNTTHENSI 93
>SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32)
Length = 458
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = -3
Query: 811 NRXATCVKWSPMENKFAVGSGXRLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNN- 635
N V WS + A GS R S+ +K+ HI K +V + WHP+N
Sbjct: 33 NSKVHSVSWSCDGRRLASGSFDRTASVFVLDKDR--LTLDHIYKGHNESVDQLCWHPSNP 90
Query: 634 ILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQ 518
L V S D +R++ A I ++P P W S P +
Sbjct: 91 DLFVTASGDKTIRIWDARIL---ERPPPR-WSSNSPYSE 125
>SB_59445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 34.7 bits (76), Expect = 0.091
Identities = 23/78 (29%), Positives = 31/78 (39%)
Frame = +3
Query: 111 HEIAFWCIESKNVSLVSIRA*RSKDWNFFIADSPPDSFL*VLSSLATYLISSPSWQYNNG 290
H I FWC+ S+ + + K+ F SPPD + L L S S Q N G
Sbjct: 19 HAIRFWCLTSRMMVAYDEMQNKVKELEQFTTQSPPD-----MKRLQLVLQGSVSIQVNAG 73
Query: 291 MQLWPATIRELLVIQLHP 344
Q + + V HP
Sbjct: 74 PQAYAQAFLDKTVCHKHP 91
>SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22)
Length = 195
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = -3
Query: 793 VKWSPMENKFAVGSGXRLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGS 614
+ +SP +NK+A + L+ I F + + + + + V IDWHP+ LLV+GS
Sbjct: 119 LSFSPTDNKYASCADDGLVKIWDFYR----CMEEKTLRGHGADVKCIDWHPHKSLLVSGS 174
Query: 613 AD 608
D
Sbjct: 175 KD 176
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 33.5 bits (73), Expect = 0.21
Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 1/135 (0%)
Frame = -3
Query: 460 FSADGNKVAWVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWIT-NNSLIVAGHSCIPL 284
FS DG KVA + D+++ + +A+ G + L C ++ S++ +CI +
Sbjct: 644 FSPDGGKVASCSDDNTVRIWEASSGEDLCLLDDHTSSVSFCCFMNQGESVVTVCSNCIKV 703
Query: 283 LYCHDGDDIKYVAKLDNTQRKESGGLSAMKKFQSLDRHARIETSDTFLDSIHQNAISCIN 104
C G + T S F D + SDT + + + +
Sbjct: 704 WSCSSG---------EQTWVYNSSSTCLSLAFSPDDSIVAMGFSDTTVQLWNSKTFARLG 754
Query: 103 IYKGTKSHTNKFSTS 59
+YKG K + S
Sbjct: 755 VYKGHKGWAHSVGIS 769
>SB_55962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 31.9 bits (69), Expect = 0.64
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -3
Query: 799 TCVKWSPMENKFAVGSGXRLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNNILLVA 620
T SP +GS RL + + W SK + P T+TS+ W + LVA
Sbjct: 160 TVAACSPSGQSVVIGSFDRLRVFNWSPRRGAWDESKAKEIPNLYTITSLAWKRDGSRLVA 219
Query: 619 GSADFKVRVFSAYIK 575
G+ V +F ++
Sbjct: 220 GTLCGGVELFDCCLR 234
>SB_762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 31.5 bits (68), Expect = 0.84
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = -3
Query: 484 GGWVHSVSFSADGNKVAWVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWITNNSLIV 308
G + S+++S DG+ +A A D IN+ D T + + L+ +P ++ ++ L++
Sbjct: 106 GKFTMSLAYSPDGHYIACGAIDGIINIFDLTTNKLLHTLEGHAMPIRSLTFSPDSQLLI 164
>SB_48470| Best HMM Match : HNOB (HMM E-Value=0)
Length = 681
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 319 SLIVAGHSCIPLLYCHDGDDIKYVAKLDNTQRKESG 212
S +V CIP+L DG+++K VA + + +SG
Sbjct: 394 SRVVDNLRCIPMLIDEDGEEVKDVASKNGKRENKSG 429
>SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 484 GGWVHSVSFSADGNKVAWVAHDSSINVTDATKGR 383
GG+V+SV F G +A DS++ + D +GR
Sbjct: 112 GGFVNSVEFHPSGTCIAAGGTDSTVKILDLMEGR 145
>SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Frame = -3
Query: 667 TVTSIDWHPNN-ILLVAGSADFKVRVF--SAYIK-DIEDQPG 554
T+T+I WHP++ L AG +D ++RV+ +A IK I+D G
Sbjct: 295 TITAIAWHPSSRYLASAGGSDRQIRVWHNAAGIKVQIDDLKG 336
>SB_22018| Best HMM Match : VKOR (HMM E-Value=5.9)
Length = 433
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 128 VYRVQERIAGLDTSMTIQGLELLHSRQSPGLLPLSVVEFGDVL 256
+Y RIA LD S + GL + S L S V +GD L
Sbjct: 323 IYTQSHRIAQLDFSQPVPGLSSFYDLYSSLLTHFSAVSYGDSL 365
>SB_51303| Best HMM Match : WD40 (HMM E-Value=3.5e-40)
Length = 400
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = -3
Query: 697 SKHIKKPIRSTVTSIDWHP-NNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLG 521
+ HI + + V S+ W P N LL G D KV ++ K + + K G
Sbjct: 178 ASHILRGHATAVLSVSWSPLNQYLLATGGRDNKVLLWDVR-KAVSCLTALDQHNGKEASG 236
Query: 520 QLLAEFPNSPSGGGWVHSVSFSADGNKVAWVAHDSSINVTDATKGR 383
++ G ++S+ F++DG + D+ + + D G+
Sbjct: 237 SCNTRTAHN----GHINSICFTSDGLNILSYGTDNRLRLWDTFTGK 278
>SB_43342| Best HMM Match : F-box (HMM E-Value=4.1e-09)
Length = 456
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = -1
Query: 675 FVRL*HLLIGIPITFCSSLALLTSKYESSLPISRISKISLDRM 547
FVR L + T C+ + + +S+++SS+P R + +S RM
Sbjct: 379 FVRKYPKLSAVDATNCAGVRVFSSEFDSSMPYGRKASLSDTRM 421
>SB_35370| Best HMM Match : Ank (HMM E-Value=4.8e-06)
Length = 813
Score = 29.1 bits (62), Expect = 4.5
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = -3
Query: 451 DGNKVAWVAHDSSINVTDATKGRAVIKLKTEYLP-----FLGCSWITNNSLIVAGHS-CI 290
D N+ VA S+ N ++ K + + +LP F +T I S +
Sbjct: 297 DVNRAEDVAEQSADNPSELPKDHECTRAELIHLPPDESVFNESDLLTEMKCIPRLRSKSL 356
Query: 289 PLLYCHDGDDI--KYVAKLDNTQRKESG 212
P+L+ D +D+ Y AKLD + +KE+G
Sbjct: 357 PVLFNLDSEDLLGNYHAKLDESDKKEAG 384
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +2
Query: 407 VD*AVVGDPGNFISVRREGNAVDPTAT*RRIGKLC*QLS*RQLRAPHIRSRLIFDILDIG 586
+D ++VGD G +R + V+ A R + QLR H+RSRL+ ++D G
Sbjct: 647 LDDSIVGDKGLLADTQRRFDEVERLAAKRAL----------QLRFDHLRSRLLL-LMDAG 695
Query: 587 REDSYFEVSRASDEQN 634
R+ + + S +N
Sbjct: 696 RKQLMRQPVKFSSREN 711
>SB_9416| Best HMM Match : WD40 (HMM E-Value=0)
Length = 700
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -3
Query: 478 WVHSVSFSADGNKVAWVAHDSSINVTDATKGRAVIKLKT 362
WV+ + +G + + D+++ V DAT+G + L+T
Sbjct: 78 WVNDIVLCRNGKTILSASSDTTVKVWDATRGFCMSTLRT 116
>SB_57418| Best HMM Match : WD40 (HMM E-Value=4.5e-15)
Length = 365
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 664 VTSIDWHP-NNILLVAGSADFKVRVFSAYIKDIEDQPGP 551
+TS++WHP + + A SAD ++ ++ ++ E GP
Sbjct: 278 ITSVEWHPTDGSVFAASSADNQITLWDLAVERDEAAEGP 316
>SB_28310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 224 EGVRGTV-CYEEVPVLGSSCSYRDQRYVLGLDTPERY 117
EG++G + +++ + GS+C D+R L LD +Y
Sbjct: 480 EGIQGAIPIVDDILIWGSTCEEHDERLRLTLDRARQY 516
>SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22)
Length = 453
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = -3
Query: 673 RSTVTSIDWHPNN-ILLVAGSADFKVRVFS 587
R T+T+I W+P+N +L + AD +V ++S
Sbjct: 61 RKTITAIAWNPHNEDILASAGADCRVLIWS 90
>SB_34467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 524
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = -3
Query: 595 VFSAYIKDIEDQPGPNVWGSKLPLGQLLAEFPNSPSGGGWVHSVSFS 455
V S++++ + NV+G L LLAEF S + W+ S+SFS
Sbjct: 22 VLSSFLQQLVIMGVHNVFG--LLYIDLLAEFKQSKAATAWIASLSFS 66
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,929,961
Number of Sequences: 59808
Number of extensions: 581673
Number of successful extensions: 1829
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1825
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2275631710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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