Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_G17
(773 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14F5.04c |pgk1||phosphoglycerate kinase|Schizosaccharomyces ... 270 1e-73
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 42 7e-05
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 39 0.001
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 33 0.034
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 33 0.060
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 32 0.10
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 32 0.10
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.10
SPBC1861.05 |||carbohydrate kinase|Schizosaccharomyces pombe|chr... 31 0.18
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.24
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 30 0.42
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 30 0.42
SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1 |Schizosa... 30 0.42
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.56
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.56
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 29 0.56
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 29 0.98
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 29 0.98
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 29 0.98
SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyce... 29 0.98
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.98
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 1.3
SPBC1734.03 ||SPBC337.19|dihydropteroatesynthase/2-amino-4-hydro... 28 1.7
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 28 1.7
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 28 1.7
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 2.3
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 27 3.0
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 27 3.0
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 3.0
SPBC3F6.03 |trr1|caf4|thioredoxin reductase Trr1|Schizosaccharom... 27 3.9
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 26 5.2
SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces pomb... 26 5.2
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.2
SPBC887.11 |pus2||tRNA pseudouridylate synthase Pus2 |Schizosacc... 26 5.2
SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces po... 26 6.9
SPAC13G7.04c |mac1||membrane anchored protein Mac1 |Schizosaccha... 25 9.1
SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|ch... 25 9.1
SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr 1|... 25 9.1
>SPBC14F5.04c |pgk1||phosphoglycerate kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 414
Score = 270 bits (662), Expect = 1e-73
Identities = 129/195 (66%), Positives = 150/195 (76%)
Frame = -2
Query: 772 ILLIXNLLDKVNEMIIGGGMAYTFLKETKGMPIGNSLYDAEGAKIVTKLLEKAEKNNVKV 593
I LI NLLDKVN +II GGMA+TFLK GM IG+SL+D G+K V ++ KA+KNNV+V
Sbjct: 218 IQLIDNLLDKVNRLIICGGMAFTFLKVLNGMKIGDSLFDEAGSKNVESMMAKAKKNNVEV 277
Query: 592 HLPVDFVTADKFDENASVGEANVETGIPDGWMGLDVGPKSRELFADPIARAKVIVWNGPA 413
LPVDFVTADKFD++A VG A E GIPDGWMGLD GPKS FA+ I +K IVWNGPA
Sbjct: 278 FLPVDFVTADKFDKDAKVGSATAEEGIPDGWMGLDCGPKSSAKFAEVITTSKTIVWNGPA 337
Query: 412 GVFEFEKFAGGTRAIMDGVVKATSNGTVTIIGGGDTATCCAKWGTEDKVSHVSTGGGASL 233
GVFEF+ FA GT++++D VK G V I+GGGDTAT K+G ED +SHVSTGGGASL
Sbjct: 338 GVFEFDNFAKGTKSMLDACVKTCEAGNVVIVGGGDTATVAKKYGKEDALSHVSTGGGASL 397
Query: 232 ELLEGKVLPGVAALS 188
ELLEGK LPGV ALS
Sbjct: 398 ELLEGKALPGVVALS 412
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 42.3 bits (95), Expect = 7e-05
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
Frame = +3
Query: 204 PGSTFPS-SNSREAPPPVETCETLSSVPHLAQHVAVSPPPMIVTVPLDVAFTTPSMMARV 380
P ST + +NS P +C T +S+P ++S P + TVP +T S +
Sbjct: 152 PTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLSTP-ITPTVP---PTSTSSTSIPI 207
Query: 381 PPANFSNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTLASPTEAFSSN 560
PP + S+++T + P T + + ++ + S+PI P+ P ST ++ ++
Sbjct: 208 PPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTS 267
Query: 561 LSAVTKSTGR*TLTLFFSAFSNSFVTILAPSA-SYRELPIGIPLVSFKNVYAIPPPIIIS 737
T ST + L ++ S + T + P+ S + +P S + PPP S
Sbjct: 268 ----TSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTS 323
Query: 738 FTLSS 752
T +S
Sbjct: 324 STGTS 328
Score = 41.9 bits (94), Expect = 1e-04
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Frame = +3
Query: 177 IYASERAATPGSTFPSSNSREAPPPVETCETLSSVPHLAQHVAVSPPPMIVTVPLDVAFT 356
I ++T ++ S+S P +C T +S+P ++S P+ TVP +
Sbjct: 87 IITESTSSTSSASTTGSSSSPLPSTSTSCTTSTSIPPTGGSSSLS-TPITPTVP---PTS 142
Query: 357 TPSMMARVPPANFSNSNTPAGPFHT----ITLALAI----GSAKSSRDFGPTSSPIHPSG 512
T S +PP + S+++T + P T T + +I GS+ S PT P S
Sbjct: 143 TSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSS 202
Query: 513 IPVSTLASPTEAFSSNLSAV-TKSTGR*TLTLFFSAFSNSFVTILAPS 653
+ + T + +N S + T ST T T + S+S T + P+
Sbjct: 203 TSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPT 250
Score = 37.9 bits (84), Expect = 0.002
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 7/160 (4%)
Frame = +3
Query: 201 TPGSTFPSSNSREAP-PPVETCETLSSVPHLAQHVAVSPPPMIVTVPLDVAFTTPSMMAR 377
TP S++S P PP T T ++ L + ++P TTP +
Sbjct: 248 TPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLP--TTSTSCTTSTSIPPTGNSTTP-VTPT 304
Query: 378 VPPANFSNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSG---IPVSTLASPTEA 548
VPP + S+++TP P T + + S+ TS+ I P+G PV+ PT
Sbjct: 305 VPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTST 364
Query: 549 FSSNL---SAVTKSTGR*TLTLFFSAFSNSFVTILAPSAS 659
S++ A T STG + L ++ S + T + P+ +
Sbjct: 365 SSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGN 404
Score = 35.5 bits (78), Expect = 0.009
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Frame = +3
Query: 222 SSNSREAPPPVETCET-LSSVPHLAQHVAVSPPPMIVTVPLDVAFTTPSMMARVPPANFS 398
+S++ PPP T T SS P + + + ++P TTP + VPP + S
Sbjct: 310 TSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTS---TSIPPTGNSTTP-VTPTVPPTSTS 365
Query: 399 NSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSG---IPVSTLASPTEA 548
+++TP P T + + S+ TS+ I P+G PV+ PT +
Sbjct: 366 STSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSS 418
Score = 28.3 bits (60), Expect = 1.3
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Frame = +3
Query: 180 YASERAATPGSTFPSSNSREAPPPVETCETLSSVPHLAQHVAVSPPPMIVTVPL-DVAFT 356
+ASE ++ + SS++ PPP + + + + S P V +
Sbjct: 671 FASESSSFYSNVTTSSSTVSTPPPTTSFPSTFTTSFITSSSLSSIPNNSTEVKTASTSSG 730
Query: 357 TPSMMARVPPANFSNSN-TPAGPFHTITLALAIGSAKSSRDFGPTSS-PIHPSGIPVSTL 530
T A + S+S+ TPA T T +++ + SS F P+S+ S +STL
Sbjct: 731 TEIKTASTSSGSSSSSSYTPASSTSTTTSSVSSRQSSSSSSFTPSSAISTAKSSFVLSTL 790
Query: 531 A 533
+
Sbjct: 791 S 791
Score = 27.9 bits (59), Expect = 1.7
Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 3/133 (2%)
Frame = +3
Query: 195 AATPGSTFPSSNSREAPPPVETCETLSSVPHLAQHVAVSP-PPMIVTVPLDVAFT-TPSM 368
+ TP + S P C T +SVP+ + V +P T V +T TP
Sbjct: 405 STTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVT 464
Query: 369 MARVPPANFSNSNT-PAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTLASPTE 545
+ N + S + P + L + +S TS+P+ S +S+ ++P
Sbjct: 465 STPLTTTNCTTSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISS-STPVT 523
Query: 546 AFSSNLSAVTKST 584
+ + T ST
Sbjct: 524 STPVTTTNCTTST 536
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 38.7 bits (86), Expect = 0.001
Identities = 38/126 (30%), Positives = 51/126 (40%), Gaps = 5/126 (3%)
Frame = +3
Query: 210 STFPSSNSREAPPPVETCETLSSVPHLAQHVAVSPPPMIVTVPLDVAFTTPSMMARVPPA 389
S+ SSN R + P E + P +AQ SPP ++ T+P T + PP
Sbjct: 421 SSSSSSNPRTSSPLASNAE---NKPPVAQQ---SPPVLLPTLPPIQTTTIQTSREVAPPP 474
Query: 390 NFSNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPI---HPSGIP--VSTLASPTEAFS 554
+ NSN A PF +++ S S FG I S IP V S E F
Sbjct: 475 SSINSNRAASPFRPTSVSPQPSSPTKSLLFGARLDAIILREHSNIPNIVMQCTSQVENFG 534
Query: 555 SNLSAV 572
NL +
Sbjct: 535 LNLQGI 540
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 33.5 bits (73), Expect = 0.034
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%)
Frame = +3
Query: 177 IYASERAATPGSTF-PSSNSREAPPPVETCETLSSVPHLAQHVAVSPPPMIVTVPLDVAF 353
I + P T+ P S+ PPP + + +P A A + P V+VP A
Sbjct: 987 IAVASSTVNPAHTYKPHGGSQIVPPPKQPANRVVPLPPTASQRASAYEPPTVSVPSPSAL 1046
Query: 354 T------TPSMMARVPPANFSNSNTPAGPFHTITLALAIGSAKS 467
+ P + +R+PP + + P P ++ AL SA S
Sbjct: 1047 SPSVTPQLPPVSSRLPPVSATRPQIPQPP--PVSTALPSSSAVS 1088
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 32.7 bits (71), Expect = 0.060
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Frame = +3
Query: 309 SPPPMIVTVPLDVAFTTPSMMARVPPANFSN--SNTPAGPFHTITLALAIGSAKSSRDFG 482
+P + +VP + T S A+ S+ S++ A T + +LA S S+
Sbjct: 44 TPATYLSSVPTLLKRATTSYNYNTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSAS 103
Query: 483 PTSSPIHPSGIPVSTLASPTEAFSSNLSAVTKSTGR*TLTLFFSAFSNSFVT 638
PTSS + S S+LAS + SS S+ S+ + ++ S+ ++S T
Sbjct: 104 PTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTT 155
Score = 27.9 bits (59), Expect = 1.7
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +3
Query: 396 SNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTLASPTEAFSSNLSAVT 575
+NS T A P + +L + ++ S TSS + S I S+LAS + SS S+ T
Sbjct: 96 TNSTTSASPTSS-SLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSST 154
Query: 576 KST 584
S+
Sbjct: 155 TSS 157
Score = 27.9 bits (59), Expect = 1.7
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 2/136 (1%)
Frame = +3
Query: 183 ASERAATPGSTFPSSNSREAPPPVETCETLSSVPHLAQHVAVSPPPMIVTVPLDVAFTTP 362
+S ++T S+ P ++S T SS + + S P + PL A +T
Sbjct: 242 SSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPS--STPLSSANSTT 299
Query: 363 SMMARVPPANFSNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTLAS-- 536
+ A P NS T T + S S+ TS+ S P+S++ S
Sbjct: 300 ATSASSTPLTSVNSTTTTSASST-----PLSSVSSANSTTATST----SSTPLSSVNSTT 350
Query: 537 PTEAFSSNLSAVTKST 584
T A S+ L++V +T
Sbjct: 351 ATSASSTPLTSVNSTT 366
Score = 27.1 bits (57), Expect = 3.0
Identities = 27/91 (29%), Positives = 46/91 (50%)
Frame = +3
Query: 387 ANFSNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTLASPTEAFSSNLS 566
A+ ++S+ + + +LA + ++ S TSS + S I S+LAS + SS S
Sbjct: 102 ASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLAS 161
Query: 567 AVTKSTGR*TLTLFFSAFSNSFVTILAPSAS 659
+ T ST T T SA S+S + A +++
Sbjct: 162 SSTNSTTSATPT--SSATSSSLSSTAASNSA 190
Score = 26.6 bits (56), Expect = 3.9
Identities = 21/88 (23%), Positives = 43/88 (48%)
Frame = +3
Query: 396 SNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTLASPTEAFSSNLSAVT 575
++S+ + + +LA + ++ S TSS + S +T A+PT + +S+ + T
Sbjct: 125 TSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSST 184
Query: 576 KSTGR*TLTLFFSAFSNSFVTILAPSAS 659
++ T + S+ NS + A S+S
Sbjct: 185 AASNSATSSSLASSSLNSTTSATATSSS 212
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 31.9 bits (69), Expect = 0.10
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 18/122 (14%)
Frame = +3
Query: 348 AFTTPSMMARVPPAN---------------FSNSNTPAGPFHTITLALAIGSAKSSRDFG 482
AF+T S + +PP N S+S F + + +L++ +AKSS
Sbjct: 481 AFSTSSSLVVIPPVNSSLVTSSTSFTKFSSLSSSQLSTENFTSASSSLSLTNAKSSLSTP 540
Query: 483 PTSSPIHPSGIPVSTLAS---PTEAFSSNLSAVTKSTGR*TLTLFFSAFSNSFVTILAPS 653
T+ P S + + T +S + SS+L+A + ST LT + + S+ + L PS
Sbjct: 541 STTIPTSNSSVSLQTSSSLIISSPIISSSLTATSTSTP--ALTHSITPSNTSYTSSLIPS 598
Query: 654 AS 659
+S
Sbjct: 599 SS 600
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 31.9 bits (69), Expect = 0.10
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 372 ARVPPANFSN--SNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTLA-SPT 542
A +PP+N SN A PF + A G+A + + + S +P G P++T+ S +
Sbjct: 410 ATMPPSNGSNFSEGLSASPFESGPAVGAAGAAAEAAEHSGSGSDSYPEG-PLATIPESDS 468
Query: 543 EAFSSNLSAVTKSTGR*TLT 602
E+ +S+L+ + R L+
Sbjct: 469 ESMASDLAGESSYGSRAALS 488
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.9 bits (69), Expect = 0.10
Identities = 31/157 (19%), Positives = 69/157 (43%)
Frame = +3
Query: 195 AATPGSTFPSSNSREAPPPVETCETLSSVPHLAQHVAVSPPPMIVTVPLDVAFTTPSMMA 374
++ P ++ SS++ + + T SS + ++ S ++ S +
Sbjct: 238 SSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSS 297
Query: 375 RVPPANFSNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTLASPTEAFS 554
P + S ++ + + + L+ S SS F +SSP S S+ +SP+ +
Sbjct: 298 SSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSF--SSSPTSSSSTISSSSSSPSSSSF 355
Query: 555 SNLSAVTKSTGR*TLTLFFSAFSNSFVTILAPSASYR 665
S+ ++ +KS+ + T+ S+ ++S + S+S R
Sbjct: 356 SSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSR 392
Score = 30.7 bits (66), Expect = 0.24
Identities = 38/183 (20%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Frame = +3
Query: 210 STFPSSNSREAPPPVETCETLSSVPHLAQHVAVSPPPMIVTVPLDVAFTTPSMMARVP-- 383
S PSS S +P E + + L +VS + + ++V+ ++ S+ + P
Sbjct: 112 SQLPSSTSFFSPTSSEYTPSSTESSSLLDPSSVSSAILPSSTSVEVSISSSSLSSSDPLT 171
Query: 384 PANFSNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTLASPTEAFSSNL 563
+ FS+ ++ + + + S+ +SS + S + VS+ +SP+ + SS L
Sbjct: 172 SSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSV-VSSSSSPSSSSSSTL 230
Query: 564 SAVTKSTGR*TLTLFFSAFSNSFVTILAPSASYRELPIGIPLVSFKNVYAIPPPIIISFT 743
++ + ST T S+ ++S ++ + S++ ++S + + P S T
Sbjct: 231 TSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIIS-SSSSSSSSPTSTSST 289
Query: 744 LSS 752
+SS
Sbjct: 290 ISS 292
Score = 27.9 bits (59), Expect = 1.7
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Frame = +3
Query: 336 PLDVAFTTPSMMARVPPANFSNSNTPA------GPFHTITLALAIGSAKSSRDFGPTSSP 497
P + TP+ + P+ FS S TP+ P + + S+ F PTSS
Sbjct: 70 PTYYGYATPTSSSE--PSIFSESATPSETNSYSSPVSSYSDPATSQLPSSTSFFSPTSSE 127
Query: 498 IHPSGIPVSTLASPTEAFSSNLSAVT 575
PS S+L P+ S+ L + T
Sbjct: 128 YTPSSTESSSLLDPSSVSSAILPSST 153
>SPBC1861.05 |||carbohydrate kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 747
Score = 31.1 bits (67), Expect = 0.18
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 438 LALAIGSAKSSRDFGPTSSPIHPSGIPVSTLASPTEAFSSNLSAVTK 578
+A+ KS D G T + G+PV TL P AF + S +K
Sbjct: 188 VAVVSAGVKSILDIGRTLEVLETQGVPVVTLGPPKSAFPAFFSRESK 234
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 30.7 bits (66), Expect = 0.24
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Frame = +3
Query: 360 PSMMARVPPANF---SNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTL 530
PSM+ +++ S+S+TP+ + + + + S+KSS +SS S S+
Sbjct: 134 PSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSS--SSSSSKSSSS 191
Query: 531 ASPTEAFSSNLSAVTKSTGR*TLTLFFSAF-SNSFVTILAPSAS 659
+S + SS+ S+ +KS+ + + S F S+SF+T P++S
Sbjct: 192 SSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITSTTPASS 235
Score = 25.4 bits (53), Expect = 9.1
Identities = 20/88 (22%), Positives = 46/88 (52%)
Frame = +3
Query: 396 SNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTLASPTEAFSSNLSAVT 575
++S + +G + ++A ++ ++S + TSS PS S+ +SP+ + S + S+
Sbjct: 118 TSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSK 177
Query: 576 KSTGR*TLTLFFSAFSNSFVTILAPSAS 659
S+ + + S+ S+S + + S+S
Sbjct: 178 SSSSSSSSSKSSSSSSSSSKSSSSSSSS 205
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 29.9 bits (64), Expect = 0.42
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Frame = +3
Query: 396 SNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPI-HPSGIPVST--LASPTEAFSSNLS 566
SNS IT ++ S+ S PT+SP+ S P S+ L++ T SS++S
Sbjct: 87 SNSTISTSSSTPITASVPTSSSILSNSTIPTTSPVPTTSSTPTSSSILSNSTIPSSSSIS 146
Query: 567 AVTKST----GR*TLTLFFSAFSNSFVTILAPSASY 662
A T +T G T F S V ++ P+A Y
Sbjct: 147 ASTITTTIISGSTQFTTTFVDQSIDTVEVVIPTAGY 182
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 29.9 bits (64), Expect = 0.42
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 246 VELLWSYSKEKCFPVLPLFQMHKSIKHGSSNIYLGFKQNTL 124
V++ WS + V P+ + K HGS+NIY G + TL
Sbjct: 818 VDVEWSTLQRDFTDVDPVRSLMKKTMHGSTNIYFGAVKATL 858
>SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 396
Score = 29.9 bits (64), Expect = 0.42
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -2
Query: 706 TFLKETKGMPIGNSLYDAEGAKIVTKLLEKAEKNNVKVHLPVDFVTADKFDE 551
++++E + + L D E ++ L E E+NN K+HL F FDE
Sbjct: 67 SYIEEEEDPDLEAYLSDLEREELEHSLEELDEENNYKLHLRYSFSQLQDFDE 118
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.56
Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Frame = +3
Query: 219 PSSNSREAPP-PVETCETLSS---VPHLAQHVAVSPPPMIVTVPLDVAFTTPSMMARVPP 386
P+ +S APP PV VP + VA PP + T PS
Sbjct: 1470 PAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPA------TAPSSTLPPSQ 1523
Query: 387 ANFSNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHP 506
++F++ +PA P A A+ SA + SSP P
Sbjct: 1524 SSFAHVPSPAPPAPQHPSAAALSSAPADNSMPHRSSPYAP 1563
Score = 27.5 bits (58), Expect = 2.3
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Frame = +3
Query: 198 ATPGSTFPSSNSREAPPPVETCETLSSVPHLAQHVAVSPPPMIVTVPLDVAFTTPSMMAR 377
A P PS+ + + P + SS P+ Q P + P T+ S R
Sbjct: 1533 APPAPQHPSAAALSSAPADNSMPHRSS-PYAPQEPVQKPQAINNIAPATNLGTSQSFSPR 1591
Query: 378 VPPANFSNSNTPAGPFHTITLAL-AIGSAKSS--RDFG----PTSSPIHPSG 512
+ P N S S +LA+ A+ SA S+ F P SP+ PSG
Sbjct: 1592 MGPVNNSGSPLAMNAAGQPSLAVPAVPSAPSNHFNPFAKMQPPAPSPLQPSG 1643
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 29.5 bits (63), Expect = 0.56
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Frame = +3
Query: 300 VAVSPPPMIVTVPLDVAFTTPSMMARVPPANFSNSNTPAGPFHTITLAL---AIGSAKSS 470
+ PPP T T SM+ P++ S + T P++ + L I SA S
Sbjct: 186 IVTLPPPASSTSSFST-ITNTSMI----PSSSSFTTTTGSPYYNTSSFLPSSVISSASLS 240
Query: 471 RDFGPTSSPIHPSGIPV----STLASPTEAFSSNLSAVTKSTGR*TLTLFFSAF-SNSFV 635
+S I + PV S+L+S T ++S+NL+ +T + T+ S F SNS V
Sbjct: 241 SSSVLPTSIITSTSTPVTVSSSSLSSFTPSYSTNLTTTGSTTTTGSATVSSSPFYSNSSV 300
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 29.5 bits (63), Expect = 0.56
Identities = 34/118 (28%), Positives = 45/118 (38%)
Frame = +3
Query: 195 AATPGSTFPSSNSREAPPPVETCETLSSVPHLAQHVAVSPPPMIVTVPLDVAFTTPSMMA 374
A TP ST P S P P T +++ A S PP + VPL V TT
Sbjct: 203 AVTPQSTLPPGFSPATPAPTSAANTPATI------AATSIPP-VPNVPL-VGATT----- 249
Query: 375 RVPPANFSNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTLASPTEA 548
VPP + N H + + GP +P+ P P +ASP+ A
Sbjct: 250 AVPPLSIPNVLPFTAAQHFPGMP---AMPMMNVPMGPGGAPLVPPPPPGMVMASPSPA 304
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 28.7 bits (61), Expect = 0.98
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +3
Query: 183 ASERAATPGSTFPSSNSREAPPPVETCETLSSVPHLAQHVAVSP--PPM--IVTVPLDVA 350
+SER A P +PS+ +R PP V+T + + V A+ VA P P+ ++ PL+VA
Sbjct: 350 SSERNAPP---YPSAPTRPTPPTVQTSSSAAPVDS-AEPVAYQPIKKPIDPMLGYPLNVA 405
Query: 351 FT 356
T
Sbjct: 406 AT 407
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 28.7 bits (61), Expect = 0.98
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 477 FGPTSSPIHPSGIPVSTLASPTEA---FSSNL 563
FG S P+ P+G+ +L+SP E F +NL
Sbjct: 61 FGTVSHPVTPAGVSTDSLSSPIETNKFFDNNL 92
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 28.7 bits (61), Expect = 0.98
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Frame = +3
Query: 204 PGSTFPSSNSREAPPP--VETCETLSSVPHLAQHVAVSPPPMIVTVPLDVAFTTPSMMAR 377
P +T +S + PP V T + H+ V PP V TT S +
Sbjct: 110 PPTTHVNSTTTVVPPTTHVNTTTVVPPTTHV-NTTTVVPPTTHANTTSFVPTTTESSIHP 168
Query: 378 VPPANFSNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPI-HPSGIPVSTLASPTEAFS 554
+ F N+ G F+T ++A+ +S PTS PI + + V+T+ S ++
Sbjct: 169 IT-TGFYNTTFTTGYFNTSVTSVAV---HNSTTVFPTSVPIVNTTSFNVTTIPSSAVHYA 224
Query: 555 S 557
S
Sbjct: 225 S 225
>SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 28.7 bits (61), Expect = 0.98
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -2
Query: 655 AEGAKIVTKLLEKAEKNNVKVHLPVDFVTAD 563
A+ K++T LL ++ ++++ +PVDF D
Sbjct: 328 AQTCKLITLLLRSSKSEDLRLSIPVDFTVKD 358
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.7 bits (61), Expect = 0.98
Identities = 28/118 (23%), Positives = 50/118 (42%)
Frame = +3
Query: 333 VPLDVAFTTPSMMARVPPANFSNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSG 512
VP V+ + S+ PA + S++ +G F T + + TSS S
Sbjct: 3681 VPSTVSPHSSSISDTKSPATVTISSS-SGQFTHSTFSTGSTMHNTVSHATSTSSSFTTSH 3739
Query: 513 IPVSTLASPTEAFSSNLSAVTKSTGR*TLTLFFSAFSNSFVTILAPSASYRELPIGIP 686
+P +TLAS + S S+ + G T + +S +++ S+S R+ + P
Sbjct: 3740 LPTNTLASTFDNSQSIFSSSSGVPGLSTKSSSLGKIGSSSISLTLSSSSIRDAELPTP 3797
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 1.3
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Frame = +3
Query: 219 PSSNSREAPPPVETCETLSSVPHLAQHVAVSP----PPMIV----TVPLDVAFTTPSMMA 374
P S A PP+ +SS PH+A A P PP V + D + +PS
Sbjct: 303 PFSPLPSAAPPIPFSPNVSSHPHMAFLPATVPTHSAPPGFVPYDFPITNDKMYPSPSFQE 362
Query: 375 RVPPANFSNSNTP 413
P + S S TP
Sbjct: 363 EFPSTSKSPSATP 375
>SPBC1734.03 ||SPBC337.19|dihydropteroatesynthase/2-amino-4-hydroxy-
6-
hydroxymethyldihydropteridinediphosphokinase/dihydroneop
terinaldolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = -2
Query: 574 VTADKFDENASVGEANV----ETGIPDGWMGLDVGPKSRELFADPIA 446
VT D F + V + N+ ++ + DG LD+G +S + ADP++
Sbjct: 426 VTPDSFSDGGKVSQNNILEKAKSMVGDGASILDIGGQSTKPGADPVS 472
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 381 PPANFSNSNTPAGPFHTITLA--LAIGSAKSSRDFGPTSSPIHPSG 512
PP ++SNS PA P + + A +A +R +G P P G
Sbjct: 62 PPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAPQPYPPQG 107
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 27.9 bits (59), Expect = 1.7
Identities = 27/113 (23%), Positives = 47/113 (41%)
Frame = +3
Query: 384 PANFSNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTLASPTEAFSSNL 563
P++ S++ P HT + S TSS S IP++T++S +++F +
Sbjct: 53 PSSSSSTFVPIST-HTSSATNTTSGQLSISSSSSTSSEYSSSSIPITTVSS-SDSFIPSS 110
Query: 564 SAVTKSTGR*TLTLFFSAFSNSFVTILAPSASYRELPIGIPLVSFKNVYAIPP 722
S ++ T + S+ +S V+ S Y G VS Y + P
Sbjct: 111 SQTISASSSTTDNVIVSSSISSTVSSTPVSTIYSGTS-GTTFVSSSTTYQVIP 162
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 2.3
Identities = 31/120 (25%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
Frame = +3
Query: 192 RAATPGSTFPSSNSREAPPPVETCETLSSVPHLAQHVAVSPPPMIVTVPLDVAFTTPSMM 371
R P S++S PPP S+P Q + PPP + P P
Sbjct: 322 RGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
Query: 372 ARV---PPANFSNSNTPAGPFHTITLALAIGSA-KSSRDFGPTSSPIHPSGIPVSTLASP 539
+R PPA PA P + +G+A ++S PT + PS P ++P
Sbjct: 382 SRAVSNPPA-----PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAP 436
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 27.1 bits (57), Expect = 3.0
Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 8/158 (5%)
Frame = +3
Query: 243 PPPVETCETLSSVPHLAQHVAVSPPPMI-------VTVPLDVAFTTPSMMARVPPANFSN 401
P P+ + T +S + +PPP I VT TT + + ++
Sbjct: 167 PQPISSSSTYNSTTSSYHNSTSTPPPTITSTKASTVTSTEATTVTTTTAVTVTATETYTV 226
Query: 402 SNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTLASPTEAFSSNLSAVTKS 581
+ T G T T A + S + S T + +T P+ + SS ++ TK
Sbjct: 227 TATNGGSTITSTGASTVTSTQPS-TVTSTQRKNTATTTKTTTYVGPSPSASSVVAYTTKC 285
Query: 582 TGR*TLTLFFSAFSNSFVTILAPSAS-YRELPIGIPLV 692
+ + +A S S +PSA+ Y P GI L+
Sbjct: 286 I---VVPVITTAASQSEAATPSPSAAVYPLFPHGIRLI 320
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -2
Query: 325 IIGGGDTATCCAKWGTEDKVSHVSTGGGASLELLEGKVLPGVAALSDA 182
IIG + + W T+++V + TGG L + + + +LSDA
Sbjct: 113 IIGNVENGIVASCWSTDEQVFCIITGGDTILFMTKNFDIISETSLSDA 160
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.1 bits (57), Expect = 3.0
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Frame = +3
Query: 219 PSSNSREAPPPVETCETLSSVPHLAQHVAVSPPPMIVTVPLDVAFTTPSMMARVPPANFS 398
P + P V + +VP + + +V PP VP + P + VP A
Sbjct: 635 PQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVPVVPEAGQL 694
Query: 399 NSN-TPAGPFHTITLALAI-GSAKSSRDFGPTSSP 497
N P P H T + G K++ PT +P
Sbjct: 695 NEPVVPPLPPHDETQEPQVGGDVKATEHTQPTKTP 729
>SPBC3F6.03 |trr1|caf4|thioredoxin reductase
Trr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 373 AIMDGVVKATSNGTVTIIGGGDTA 302
A+ DG V N + ++GGGD+A
Sbjct: 143 AVCDGAVPIYRNKPLAVVGGGDSA 166
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 165 HVLXIYASERAATPGSTFPSSNSREAPPPVETCETLSSVPHL 290
H L I + A P + +S + APPPV+ TL + +L
Sbjct: 288 HKLPIVKPKLAVFPSNQATASTLQLAPPPVQAIPTLRNPVNL 329
>SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 237 LWSYSKEKCFPVLPLFQMHKSIKHGSSNIYLG 142
++SY KE FPV P+ + + GS LG
Sbjct: 6 MFSYGKENAFPVTPISNRNGTKGAGSKRAPLG 37
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 26.2 bits (55), Expect = 5.2
Identities = 19/92 (20%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 357 TPSMMARVPPANFSNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTLAS 536
TPS + ++ S+S+TP T +++ + S+ SS + S VS ++
Sbjct: 148 TPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSSASSSGSISSADAKTVSASSN 207
Query: 537 PT-EAFSSNLSAVTKSTGR*TLTLFFSAFSNS 629
T FS++ ++ + S + + ++++S +
Sbjct: 208 STISGFSTSTTSASSSAAGNSSSSSYTSYSGA 239
>SPBC887.11 |pus2||tRNA pseudouridylate synthase Pus2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 26.2 bits (55), Expect = 5.2
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 635 HNFSTLSVIQGITNRHSFGFLQECVCHTPSNY 730
HNF +V T+ ++ F++ C TP Y
Sbjct: 288 HNFHNFTVTDDSTSPSNYRFIESVTCGTPFVY 319
>SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 547
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 631 KLLEKAEKNNVKVHLPVDFVTADKFDENASVG 536
KLL +A +N K+H V+F+ + D+NA G
Sbjct: 3 KLLHEALQNGCKLHKSVEFIQSR--DDNACFG 32
>SPAC13G7.04c |mac1||membrane anchored protein Mac1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 756
Score = 25.4 bits (53), Expect = 9.1
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +3
Query: 384 PANFSNSNTPAGPFHTITLALAIGSAKSSRDFGPTSSPIHPSGIPVSTLASPTEAFSSNL 563
P N S +N+ + I + L G +SR T SGIP ++ PT S N
Sbjct: 592 PRNTSRNNSSSEFNAQIPMNLRNGPRNASRSNSSTDL-FGQSGIPGNSRGMPTSPNSRNN 650
Query: 564 SAVTKS 581
SA+ S
Sbjct: 651 SALDLS 656
>SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 678
Score = 25.4 bits (53), Expect = 9.1
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -3
Query: 540 WEKLM*KPEFLMDGWDSMLDRNHESSSQILLP 445
W + KP W +HESSS I LP
Sbjct: 394 WRSVQLKPMMQYVNWLEAFYESHESSSSIHLP 425
>SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 809
Score = 25.4 bits (53), Expect = 9.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 608 FLSFFQ*FCHNFSTLSVIQGITNRHSFGFLQECVCHTP 721
FLS + F ++ + +QG T+ + F+ E +C TP
Sbjct: 160 FLSSMRHFTYHTNVNLTVQGYTSAEAPVFVDENICVTP 197
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,477,832
Number of Sequences: 5004
Number of extensions: 79358
Number of successful extensions: 307
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 303
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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