Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_G08
(716 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 75 7e-14
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 73 3e-13
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 73 3e-13
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 72 5e-13
11_06_0759 + 27008772-27009571,27010457-27010576,27011683-270119... 31 0.69
06_02_0086 - 11567390-11567634,11568316-11568341,11571082-115712... 31 0.69
05_05_0229 - 23457438-23457629,23457706-23457828,23457913-234580... 31 0.91
02_02_0179 + 7500647-7500779,7503021-7503222,7503356-7503427,750... 30 1.6
07_01_0025 - 172742-173260,174559-174621,174701-174763,174852-17... 30 2.1
04_03_1003 - 21631188-21631274,21631939-21632043,21632171-216322... 29 2.8
01_06_0876 - 32654209-32654238,32654357-32654672,32654833-326549... 29 2.8
11_01_0151 - 1263237-1263406,1267405-1267646,1267681-1267781,126... 29 3.7
03_06_0672 + 35443883-35444051,35444151-35444482 29 3.7
10_08_0444 + 17971724-17971797,17972119-17972176,17972613-179727... 29 4.9
10_08_0426 - 17817975-17818582,17819068-17819209,17819648-178197... 29 4.9
04_04_0648 - 26936123-26936447,26936540-26936841,26937043-269379... 29 4.9
02_01_0150 + 1063732-1064214,1064290-1064355,1064721-1064803,106... 29 4.9
12_02_0233 - 16023062-16023253,16023528-16023609,16023699-160238... 28 6.4
09_02_0602 - 11118788-11119178,11119262-11119451,11119590-111196... 28 6.4
08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821 28 6.4
04_04_0261 + 24007790-24009098,24009191-24011118 28 6.4
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340... 28 6.4
01_03_0260 - 14323503-14323603,14323751-14323990,14324212-143242... 28 6.4
12_01_0142 - 1093127-1093336,1093519-1093731,1093819-1093962,109... 28 8.5
11_06_0578 + 25176304-25176388,25176503-25177032,25177267-251779... 28 8.5
07_03_0504 - 18842442-18844668,18845418-18845428 28 8.5
05_03_0175 + 9222749-9222819,9223045-9223116,9223426-9223497,922... 28 8.5
01_06_1147 + 34892415-34893702,34894051-34894676 28 8.5
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 74.5 bits (175), Expect = 7e-14
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Frame = -2
Query: 715 YFRDQEGQDVXLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTT-- 542
Y + G+ V + + ++ + A EVSA +P GY + TD+ T+ ER
Sbjct: 271 YLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEG 330
Query: 541 KKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMD 362
+KGSIT + + +P DD+T P P T + + R + IYP ++ L S SR+M
Sbjct: 331 RKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMK 390
Query: 361 PNI----IGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FL 197
I +H +V+ + K +Q + A++G + LS ED L + K +R F+
Sbjct: 391 SAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFV 450
Query: 196 SQ 191
+Q
Sbjct: 451 TQ 452
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 72.5 bits (170), Expect = 3e-13
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Frame = -2
Query: 715 YFRDQEGQDVXLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK- 539
YFRD G +V + D+ R+ +A E+S L +P+ GY LA + + ER K
Sbjct: 356 YFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKC 414
Query: 538 ------KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDST 377
GS+T V A+ P D +DP + T + + L + +A+ +P+V+ L S
Sbjct: 415 LGSPDRTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISY 474
Query: 376 SRIMDP-----NIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARK 212
S+ + ++ +++LQ L +I+ ++G D L+E DK+T+ A+
Sbjct: 475 SKYSKALESFYEKFDQDFIDIRTKAREVLQREDDLNEIVQLVGKDALAESDKITLETAKL 534
Query: 211 IQR-FLSQ 191
++ +L+Q
Sbjct: 535 LREDYLAQ 542
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 72.5 bits (170), Expect = 3e-13
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 7/182 (3%)
Frame = -2
Query: 715 YFRDQEGQDVXLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTT-- 542
Y + G+ V + + ++ + A EVSA +P GY + TD+ T+ ER
Sbjct: 301 YLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEG 360
Query: 541 KKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMD 362
+ GSIT + + +P DD+T P P T + + R + IYP ++ L S SR+M
Sbjct: 361 RSGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMK 420
Query: 361 PNI----IGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FL 197
I +H +V+ + K +Q + A++G + LS ED L + K +R F+
Sbjct: 421 SAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFV 480
Query: 196 SQ 191
+Q
Sbjct: 481 TQ 482
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 71.7 bits (168), Expect = 5e-13
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 16/191 (8%)
Frame = -2
Query: 715 YFRDQEGQDVXLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI----- 551
Y+RD G +V + D+ R+ +A E+S L +P+ GY LA + + ER
Sbjct: 342 YYRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVRC 400
Query: 550 --TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDST 377
+ + GS+T V A+ P D +DP + T + + L + +A+ +P+V+ L S
Sbjct: 401 LGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISY 460
Query: 376 SRIMDPNIIGAEHY--------NVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVAR 221
S+ HY ++ +++LQ L +I+ ++G D L+E DK+T+
Sbjct: 461 SKYSKIPTALEPHYEREDPDFIDIRTKAREVLQREDDLNEIVQLVGKDALAESDKITLET 520
Query: 220 ARKIQR-FLSQ 191
A+ ++ +L+Q
Sbjct: 521 AKLLREDYLAQ 531
>11_06_0759 +
27008772-27009571,27010457-27010576,27011683-27011957,
27012516-27013783
Length = 820
Score = 31.5 bits (68), Expect = 0.69
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Frame = +2
Query: 113 GESFDSFLKWY*FTRMSSEHLSYLER------L*EEPLNFTCTCHCQLVFFRQLVHTQNS 274
G +FD + W F + L YLE + P TC V R LVH Q+S
Sbjct: 704 GFTFDCRVPWVTFKEEAMPSLQYLELKLYAGPAGKIPSGITCLPCLTKVILRYLVHYQSS 763
Query: 275 NNVLQGFVVLKNFLNSTCNIVVLSSNNIGVHD 370
+V ++ + N++VLS N G H+
Sbjct: 764 ASVQDTISKMRKESSEHPNMIVLSQN--GEHE 793
>06_02_0086 -
11567390-11567634,11568316-11568341,11571082-11571224,
11571569-11571682,11571855-11572888,11574723-11575047,
11576843-11577124
Length = 722
Score = 31.5 bits (68), Expect = 0.69
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = -2
Query: 622 GRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDL--TDPAPATT-FAH- 455
GR PSA+GY+P A ++ ERI TK+ +A P ++ T ATT F H
Sbjct: 69 GRDPSAMGYRPRRA----SIAERILLTKRKMEEIKEAPVYPTTNVSQTTATRATTVFQHG 124
Query: 454 -LDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYN 332
TT L I+ + +P P I PNI+ N
Sbjct: 125 ASKPTTGLPMNISAVASFPVTTP----PTIPSPNILKQTQLN 162
>05_05_0229 -
23457438-23457629,23457706-23457828,23457913-23458026,
23462062-23462597,23463258-23464545
Length = 750
Score = 31.1 bits (67), Expect = 0.91
Identities = 23/67 (34%), Positives = 29/67 (43%)
Frame = -2
Query: 631 ALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHL 452
A +P TL T + T IT T G V+ + +PA L P P+ T L
Sbjct: 36 AFAASVPHGRKLNWTLTTQVCTSWVGITCTPDGR--RVRELRLPAVGLFGPIPSDTLGKL 93
Query: 451 DATTVLS 431
DA VLS
Sbjct: 94 DALQVLS 100
>02_02_0179 +
7500647-7500779,7503021-7503222,7503356-7503427,
7503655-7503726,7504212-7504283,7504711-7504782,
7505045-7505116,7505209-7505280,7505688-7505759,
7506215-7506292,7506670-7506729,7506810-7506848,
7506949-7506998,7507110-7507480,7508467-7508662,
7508856-7508936,7509694-7509848,7510302-7510512,
7510648-7510882,7510995-7511145,7511813-7512181
Length = 944
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = -2
Query: 670 NIFRFTQAGSEVSALLGRIPSAVGYQPTLATDM--GTMQERITTTKKGSITSVQAIYVPA 497
N+ T + + + G +P +G P L + G E + G+I S++ ++ A
Sbjct: 129 NLTYLTNLSLQGNRISGTVPKELGRMPFLKSINLEGNQLEGHIPPEFGNIISLERFFISA 188
Query: 496 DDLTDPAPATTFAHLDATTVL 434
+D+T P +TF+ L T L
Sbjct: 189 NDITGELP-STFSRLTNMTDL 208
>07_01_0025 -
172742-173260,174559-174621,174701-174763,174852-174950,
175792-175818,175946-176251
Length = 358
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/101 (21%), Positives = 45/101 (44%)
Frame = +2
Query: 296 VVLKNFLNSTCNIVVLSSNNIGVHDTGS*VKRIHSWVDTQFSNGSGEYSGSIQVSKSGSW 475
VVL+ + + ++ ++++ H+ ++HS + +S S +Y ++ S S
Sbjct: 160 VVLRKMIVQEVKMNLVDTSSVNFHNPIDKKSKVHSKTEPSYSRFSTKYFSTVLSSLSPDQ 219
Query: 476 SRICQVISWYINSLYRCDGTFLGGGNSFLHSTHVSSQSRLI 598
RI + + NSL D ++ S + HV +S I
Sbjct: 220 KRI--IGDYGFNSLLMFDNAYVPNKFSSWIANHVDVKSSQI 258
>04_03_1003 -
21631188-21631274,21631939-21632043,21632171-21632248,
21632337-21632411,21632908-21632994,21633091-21633158,
21633478-21633565,21633684-21633784,21633831-21633990,
21635088-21635246,21635351-21635527
Length = 394
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 356 IGVHDTGS*VKRIHSWVDTQFSNGSGEYSGSIQVSKSG---SWSRICQVISWYINSL 517
+G HD+G+ K I W +NGS + ++ + ++SR +++W +N+L
Sbjct: 115 LGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGNITFSRFRFLVAWLVNAL 171
>01_06_0876 -
32654209-32654238,32654357-32654672,32654833-32654901,
32655238-32655275,32655418-32655478,32655550-32655617,
32655729-32655889,32656687-32656751,32656883-32656956,
32658158-32658245,32658800-32658879,32659168-32659224,
32659332-32659404,32659524-32659762,32659846-32660025,
32660150-32660440
Length = 629
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -2
Query: 664 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA 512
F + + LG+I +G QP GT +R TT++ ++ VQA
Sbjct: 238 FHLYKENKDTQEALGKIGKMLGLQPRSFGFAGTKDKRAVTTQQVTVFKVQA 288
>11_01_0151 -
1263237-1263406,1267405-1267646,1267681-1267781,
1268010-1268780
Length = 427
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 156 ACPVNTSATWKGCERNL*ILRARATVNLSSSDNSSI 263
A P+ +S TWKG E L +++ R + + DN I
Sbjct: 42 AFPLVSSPTWKGIEHGLELVKQRIIWRVGNGDNIKI 77
>03_06_0672 + 35443883-35444051,35444151-35444482
Length = 166
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2
Query: 331 VARGVQKILQDYKSLQDIIAILGMDELSEEDK 236
VA GVQ++++ KSL I A+ +E EE++
Sbjct: 84 VATGVQRLIKGIKSLSQIFAMYDDEEEDEEER 115
>10_08_0444 +
17971724-17971797,17972119-17972176,17972613-17972708,
17972974-17973000,17973019-17973075,17973604-17973687,
17974304-17974384,17974928-17975071,17975218-17975309,
17975998-17976079,17976818-17977000,17977360-17977438,
17977555-17977613,17978162-17978290,17979188-17979367,
17980312-17980446,17980528-17980602,17980890-17980947,
17981035-17981282,17981594-17981733,17981961-17982132,
17982797-17982887,17983099-17983221,17984951-17985032,
17985715-17985835,17985886-17985915,17986427-17986549
Length = 940
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 473 WSRICQVISWYINSLYRCDGTFLGGGNSFLH 565
W R V Y+ SLYRCD L S H
Sbjct: 421 WPRFKTVFDMYLQSLYRCDTKLLWVDGSHPH 451
>10_08_0426 - 17817975-17818582,17819068-17819209,17819648-17819745,
17820070-17821897,17822331-17822738,17822891-17822943,
17823461-17823877,17824401-17824605
Length = 1252
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +2
Query: 422 NGSGEYSGSIQVSKSGSWSRICQVISWYINSLYRCDGTFLGGGNSFLHSTHVSSQSR 592
N S + + V S SW CQ + +YR FL + FL + + + +
Sbjct: 916 NISSAWKKDVLVLFSNSWCGFCQRTELVVREVYRSFKNFLSSNSQFLQAQDLQIEEK 972
>04_04_0648 -
26936123-26936447,26936540-26936841,26937043-26937915,
26937995-26938108,26938285-26938612,26938719-26938843,
26938926-26938991,26939099-26939166,26939262-26939343,
26939433-26939546,26939647-26939747,26940429-26940678
Length = 915
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +2
Query: 410 TQFSNGSGEYSGSIQVSKSGSWSRICQVISWYINSLYRCDGTFLGGGNSFLHSTHVSSQS 589
+++S S +SG + ++S S+I S I RC T GGN L S+ V S S
Sbjct: 476 SRYSVSSPPFSGMLPTNRSDHLSQISNEDSDDICKEVRCIETNETGGNECLESSAVGSNS 535
>02_01_0150 +
1063732-1064214,1064290-1064355,1064721-1064803,
1065100-1065155,1065247-1066061
Length = 500
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/74 (28%), Positives = 40/74 (54%)
Frame = -2
Query: 316 QKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPL 137
+K+L+ ++Q+ ++ ++ E + A + + R LS F+ ++ AG LVP+
Sbjct: 181 KKMLKHRYAMQEAKHLVCDKNVTVEQSIHTALSSQFVR-LSSYFK--KIHMSGAGNLVPM 237
Query: 136 EETIKGFSKILAGD 95
E +K SKI AG+
Sbjct: 238 EIALKVASKIAAGE 251
>12_02_0233 -
16023062-16023253,16023528-16023609,16023699-16023809,
16023890-16024141,16024227-16024580,16024893-16025548,
16025554-16026459,16026550-16026747
Length = 916
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -2
Query: 592 PTLATD--MGTMQERITTTKKGSITSVQAIYVPADDLTDPAPAT 467
P L TD T + TT S+ SVQ P D +T P P +
Sbjct: 421 PRLFTDGQQPTQSAQQTTNVPSSVGSVQTTPFPVDSITGPTPCS 464
>09_02_0602 -
11118788-11119178,11119262-11119451,11119590-11119658,
11119890-11120016,11120134-11120399,11120760-11120872,
11121693-11121764,11121860-11121998,11124277-11124360,
11125278-11125771,11127604-11128187
Length = 842
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/81 (22%), Positives = 34/81 (41%)
Frame = +2
Query: 392 IHSWVDTQFSNGSGEYSGSIQVSKSGSWSRICQVISWYINSLYRCDGTFLGGGNSFLHST 571
++ W + +N EYS SW+ +C +++ Y + + + L +S LH
Sbjct: 111 VNKWDEVYIANKDKEYSSEAMFVAWASWASVC-LVNTYQGTPF-VNTVELRQLDSMLHFR 168
Query: 572 HVSSQSRLISYSRWDTTKQSR 634
+ S + Y R + SR
Sbjct: 169 KIMGNSSIYLYERRNMGPSSR 189
>08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821
Length = 716
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -2
Query: 490 LTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPL--DSTSRIMDPNIIGAEHYNVARGV 317
L + A T LDA+ L +A I + PL D S + PN GAE N+AR +
Sbjct: 514 LLESAEDTALDILDASDELGLFLARAVIDDVLAPLNLDEISGKLPPNCSGAETLNMARSL 573
>04_04_0261 + 24007790-24009098,24009191-24011118
Length = 1078
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Frame = -2
Query: 631 ALLGRIPSAVGYQPTLATDMGTMQERIT-----TTKKGSITSVQAIYVPADDLTDPAPAT 467
A+ G IPS+VG T ++ Q +T +KG+ +++ + + + L+ P PA
Sbjct: 410 AISGEIPSSVG-NLTRLRELDLSQNNLTGPITSINRKGAFLNLEILQLCCNSLSGPVPAF 468
Query: 466 TFA--HLDATTVLSRAIA 419
F+ L+ +++S +A
Sbjct: 469 LFSLPRLEFISLMSNNLA 486
>02_01_0473 -
3403547-3404241,3404455-3404983,3405299-3405477,
3405868-3405952,3406136-3406482,3407061-3407159,
3408135-3408636
Length = 811
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 156 ACPVNTSATWKGCERNL*ILR 218
A P NTS TWKG E L +L+
Sbjct: 440 AFPSNTSPTWKGIEHGLELLK 460
>01_03_0260 - 14323503-14323603,14323751-14323990,14324212-14324275,
14324349-14324654,14324841-14325055,14325551-14325845,
14325965-14326129,14326324-14327352,14333553-14333814,
14334135-14334631,14338714-14340123
Length = 1527
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = -3
Query: 426 PLLNWVSTQLWI-----LLTQLPVSWTPILLELSTTMLHVEFRKFFRTTN 292
P W+S ++I ++ V+W ++L + ML++ FRK++ +T+
Sbjct: 1079 PFFVWMSVSMYITVIGVVIMTCQVAWPSVVLVVPLLMLNLWFRKYYISTS 1128
>12_01_0142 -
1093127-1093336,1093519-1093731,1093819-1093962,
1094202-1094312,1094935-1094956,1095457-1095701
Length = 314
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +2
Query: 260 HTQNSNNVLQGFVVLKNFLNSTCNIVVLSSNNIGVHDTGS*V-KRIHSWV--DTQFSNGS 430
H QNS L+ V KN L+S L + + + D+ V + +WV + +F S
Sbjct: 97 HIQNSTKELKQGPVGKN-LSSAEKRKFLVNTLLDLEDSKEGVYSTLDAWVAFEQEFPVAS 155
Query: 431 GEYSGSIQVSKSGSWSRICQVISWYIN 511
+ + + + K W RI QVI W ++
Sbjct: 156 LKQA-LVALEKEEQWHRIVQVIKWMLS 181
>11_06_0578 +
25176304-25176388,25176503-25177032,25177267-25177997,
25178122-25178172,25178562-25178813,25178894-25179004,
25179102-25179183,25179460-25179489
Length = 623
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 568 TMQERITTTKKGSITSVQAIYVPADDLTDPAPAT 467
T E+ TT S+ SV+ P D +T P P +
Sbjct: 230 TQSEQQTTNVPNSVGSVETTPFPVDSITGPTPCS 263
>07_03_0504 - 18842442-18844668,18845418-18845428
Length = 745
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -2
Query: 292 SLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVP 140
S +++++++ MD+ S +TV K+ FL A H+G +P
Sbjct: 310 SARNLVSLVQMDDDSNVSNMTVTIQNKVHEFLQFEAHEASFLEVHSGDDIP 360
>05_03_0175 +
9222749-9222819,9223045-9223116,9223426-9223497,
9223609-9223680,9223765-9223836,9224408-9224482,
9224587-9224658,9224912-9224977,9225051-9225095,
9225220-9225724,9225807-9226005,9226080-9226238,
9226316-9226434,9226556-9226766,9226905-9227136,
9227219-9227369,9227458-9227781
Length = 838
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Frame = -2
Query: 661 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERIT---TTKKGSITSVQAIYVPADD 491
+++ G ++ L G +P +G L + +G + T + G++T +Q +Y+ +
Sbjct: 20 KYSSLGLALNPLSGLLPKELGNLTNLLS-LGISLDNFTGELPEELGNLTKLQQLYIDSSG 78
Query: 490 LTDPAPATTFAHLDATTVLSRAIAEL-GIYPAVDPLDSTSRIMD 362
+ P P TF+ L L + E G P D L S + ++D
Sbjct: 79 FSGPFP-PTFSKLKNLNTLRASDNEFTGKIP--DYLGSLTNLID 119
>01_06_1147 + 34892415-34893702,34894051-34894676
Length = 637
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 520 VQAIYVPADDLTDPAPATTFAHLDATTVLS 431
VQ + +PA L P P+ T LDA VLS
Sbjct: 71 VQTLRLPAVGLFGPLPSDTLGKLDALEVLS 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,741,106
Number of Sequences: 37544
Number of extensions: 437020
Number of successful extensions: 1325
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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