Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_G06
         (754 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0006 + 16257288-16259522                                         29   3.0  
02_05_1326 - 35712102-35712473,35712608-35712720,35712944-357148...    29   3.0  

>03_04_0006 + 16257288-16259522
          Length = 744

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -2

Query: 657 GVQYLRQTAGE*AVVNSSPT*KPDQGRLIHRSSHNG 550
           G Q  R TAG  A  N+ P+  PD GRL+ RS+ +G
Sbjct: 483 GRQQRRLTAG--ASNNAFPSSSPDGGRLVFRSTRDG 516


>02_05_1326 -
           35712102-35712473,35712608-35712720,35712944-35714857,
           35714942-35715135,35715237-35716786,35716946-35717049,
           35717258-35717399,35717692-35717910
          Length = 1535

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +2

Query: 278 HKFALFSYRMVVLDTLLLFWAVASRYLNFQITLHSTTIVVKPRLS 412
           HK A  S+ + VL  +  FW    R L+++  + +  ++V P L+
Sbjct: 63  HKLAFLSFNLEVLVFVYAFWRARRRNLSWRQPIQALPVLVIPALA 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,292,719
Number of Sequences: 37544
Number of extensions: 321542
Number of successful extensions: 555
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)