Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_G04
         (751 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.76 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.76 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.3  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   3.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   7.1  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   9.3  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   9.3  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +2

Query: 251 HRCVSRRSSRNSAQSLVRQILAEQSPDVVTNMVESGLNLHRKAYLECA 394
           ++C+ RRS  ++AQ+     L    P ++ + +E  L       L+C+
Sbjct: 397 YQCIVRRSEGDTAQASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCS 444


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +2

Query: 251 HRCVSRRSSRNSAQSLVRQILAEQSPDVVTNMVESGLNLHRKAYLECA 394
           ++C+ RRS  ++AQ+     L    P ++ + +E  L       L+C+
Sbjct: 397 YQCIVRRSEGDTAQASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCS 444


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 731 QEVRTAQXGYGIPGLHHVQGVK 666
           Q V+TAQ   G+ G+  VQGV+
Sbjct: 845 QGVQTAQGVQGVQGVQGVQGVQ 866


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/31 (22%), Positives = 15/31 (48%)
 Frame = +3

Query: 546 HFDPFSDPIYV*CHSGLQPLSGTDQDEALLH 638
           HF P +  +   CH   + L+  +  +++ H
Sbjct: 395 HFQPLNSAVCALCHKVFRTLNSLNNHKSIYH 425


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 363 FSPDSTMLVTTSGDCSAKIWRTSDW 289
           FSP S +       CSA +WR   W
Sbjct: 534 FSPLSLLGGPLVMVCSAPVWRFQPW 558



 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 442 PHVAVALVINSRHHLAGWINSY 507
           PHVA   +  +RHH   +  SY
Sbjct: 763 PHVAAYFLSRARHHDDLYSQSY 784


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 198 SDSYARLWNIERGTLEXG 145
           +DS  RLW ++ GT+  G
Sbjct: 135 ADSCDRLWVLDTGTIGIG 152


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = -2

Query: 624 HPDQSQIMVGDQSGIIHIWDLKTDQNEQLIPEAEASIQDIAIDPAGKMMA 475
           +PD S     D SGI+  + +  D+ ++L       I +I +  + K++A
Sbjct: 111 YPDWSWANYKDCSGIVSAYKIAIDKFDRLWVLDSGLINNIQLMCSPKLLA 160


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,914
Number of Sequences: 438
Number of extensions: 4051
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)