Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_G03
(368 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007293-1|AAP35957.1| 51|Homo sapiens ATP synthase, H+ transp... 52 8e-07
BC105811-1|AAI05812.1| 51|Homo sapiens ATP5E protein protein. 52 8e-07
BC003671-1|AAH03671.1| 51|Homo sapiens ATP synthase, H+ transp... 52 8e-07
BC001690-1|AAH01690.1| 51|Homo sapiens ATP synthase, H+ transp... 52 8e-07
AL591024-1|CAH70632.1| 51|Homo sapiens protein ( Human DNA seq... 52 8e-07
AL109840-12|CAC09372.1| 51|Homo sapiens ATP synthase, H+ trans... 52 8e-07
AF052955-1|AAF72736.1| 51|Homo sapiens F1-ATPase epsilon-subun... 52 8e-07
AB209320-1|BAD92557.1| 600|Homo sapiens LEPREL2 protein variant... 30 2.7
L24158-1|AAA16099.1| 1000|Homo sapiens integrin alpha 9 protein ... 29 6.2
D25303-1|BAA04984.1| 1035|Homo sapiens integrin alpha subunit pr... 29 6.2
>BT007293-1|AAP35957.1| 51|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, epsilon subunit
protein.
Length = 51
Score = 51.6 bits (118), Expect = 8e-07
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -1
Query: 263 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRV 141
WRQAGL+YI YS I AK +R +LK EF+A A K S+V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>BC105811-1|AAI05812.1| 51|Homo sapiens ATP5E protein protein.
Length = 51
Score = 51.6 bits (118), Expect = 8e-07
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -1
Query: 263 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRV 141
WRQAGL+YI YS I AK +R +LK EF+A A K S+V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>BC003671-1|AAH03671.1| 51|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, epsilon subunit
protein.
Length = 51
Score = 51.6 bits (118), Expect = 8e-07
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -1
Query: 263 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRV 141
WRQAGL+YI YS I AK +R +LK EF+A A K S+V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>BC001690-1|AAH01690.1| 51|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, epsilon subunit
protein.
Length = 51
Score = 51.6 bits (118), Expect = 8e-07
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -1
Query: 263 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRV 141
WRQAGL+YI YS I AK +R +LK EF+A A K S+V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>AL591024-1|CAH70632.1| 51|Homo sapiens protein ( Human DNA
sequence from clone RP11-153M24 on chromosome 13
Contains a novel gene similar to ATP synthase (H+
transporting, mitochondrialnase, an).
Length = 51
Score = 51.6 bits (118), Expect = 8e-07
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -1
Query: 263 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRV 141
WRQAGL+YI YS I AKV+R +LK EF+A A K + V++
Sbjct: 5 WRQAGLSYIRYSQICAKVVRDALKTEFKANAKKTSGNSVKI 45
>AL109840-12|CAC09372.1| 51|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, epsilon subunit
protein.
Length = 51
Score = 51.6 bits (118), Expect = 8e-07
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -1
Query: 263 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRV 141
WRQAGL+YI YS I AK +R +LK EF+A A K S+V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>AF052955-1|AAF72736.1| 51|Homo sapiens F1-ATPase epsilon-subunit
protein.
Length = 51
Score = 51.6 bits (118), Expect = 8e-07
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -1
Query: 263 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRV 141
WRQAGL+YI YS I AK +R +LK EF+A A K S+V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>AB209320-1|BAD92557.1| 600|Homo sapiens LEPREL2 protein variant
protein.
Length = 600
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +1
Query: 85 LTPLT*SFSCAGRPLAQGVTLT*DSSRFNASAR 183
L+PL FS A L +GVTLT DS + N S R
Sbjct: 298 LSPLCSVFSLADVLLLEGVTLTQDSRQLNGSER 330
>L24158-1|AAA16099.1| 1000|Homo sapiens integrin alpha 9 protein
protein.
Length = 1000
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 194 LVTCEAPWLRCLSSLCKLNQLASKRSFC*CSYLLLFSKI 310
++ CE P + CL++ C + LA + S Y+LL ++I
Sbjct: 853 VLDCEKPGISCLTAHCNFSALAKEESRTIDIYMLLNTEI 891
>D25303-1|BAA04984.1| 1035|Homo sapiens integrin alpha subunit
protein.
Length = 1035
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 194 LVTCEAPWLRCLSSLCKLNQLASKRSFC*CSYLLLFSKI 310
++ CE P + CL++ C + LA + S Y+LL ++I
Sbjct: 888 VLDCEKPGISCLTAHCNFSALAKEESRTIDIYMLLNTEI 926
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,411,712
Number of Sequences: 237096
Number of extensions: 900094
Number of successful extensions: 1515
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1515
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -