Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_F09
         (763 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024812-3|AAF59551.1|  183|Caenorhabditis elegans Hypothetical ...   275   3e-74
U88166-2|AAO44911.1|  118|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AL023838-2|CAA19505.1|  452|Caenorhabditis elegans Hypothetical ...    29   4.8  
Z81062-2|CAB02946.1|  269|Caenorhabditis elegans Hypothetical pr...    28   8.3  
L16685-2|AAY43982.1|  262|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>AC024812-3|AAF59551.1|  183|Caenorhabditis elegans Hypothetical
           protein Y54E10BR.5 protein.
          Length = 183

 Score =  275 bits (674), Expect = 3e-74
 Identities = 124/175 (70%), Positives = 151/175 (86%)
 Frame = -3

Query: 626 SLFDDVRRMNKRQFMYQVLSFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHRG 447
           ++F ++R+MN RQ  YQ L+F M+VSSALMIWKG+MV+TGS+SP+VVVLSGSMEPAF+RG
Sbjct: 8   AMFSEIRQMNIRQLFYQCLNFAMVVSSALMIWKGMMVITGSDSPVVVVLSGSMEPAFYRG 67

Query: 446 DLLFLTNYPEEPVRVGEIVVFKVEGRDIPIVHRVLKLHEKNNGTVKFLTKGDNNSVDDRG 267
           DLL LTN  E+PVRVG+I VFKVEGR+IPIVHRV+K+HEK+    K LTKGDNN VDDRG
Sbjct: 68  DLLLLTNDLEDPVRVGDITVFKVEGREIPIVHRVIKVHEKSADNTKILTKGDNNQVDDRG 127

Query: 266 LYAQGQLWLTKKDVVGRARGFLPYVGMVTIYMNEYPKFKFAVLACLAIYVLVHRE 102
           LYA GQLWL++ DVVGR +G LPYVGMVTI MN+YPK K+AVLA L ++VL+H+E
Sbjct: 128 LYAPGQLWLSRTDVVGRTKGLLPYVGMVTIIMNDYPKLKYAVLAFLGLFVLLHKE 182


>U88166-2|AAO44911.1|  118|Caenorhabditis elegans Hypothetical
           protein M01A12.3 protein.
          Length = 118

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 162 IFIHIYGDHSNIWQKSSC 215
           +FIH++GDH N+ +   C
Sbjct: 32  VFIHLFGDHLNVLEDDEC 49


>AL023838-2|CAA19505.1|  452|Caenorhabditis elegans Hypothetical
           protein Y43C5A.2 protein.
          Length = 452

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 751 IGNXNELIVVTATVGNRXNFNNXTLHCIIS 662
           I N N L+V+ A  GN  +FN   LH +IS
Sbjct: 88  ISNLN-LVVLDANAGNAHSFNGFDLHILIS 116


>Z81062-2|CAB02946.1|  269|Caenorhabditis elegans Hypothetical
           protein F15A4.2 protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = +1

Query: 505 LPVTTIKPFHIIKAEDTIIPKLNTWYMNCRLFIRRTSSNRLSNIVNL 645
           +P   ++PFH++     +I ++     N  + I RT+S ++  I  L
Sbjct: 1   MPRYIVRPFHLLNLPTVVISEVLNHLKNIDICILRTTSRKIRTIGKL 47


>L16685-2|AAY43982.1|  262|Caenorhabditis elegans Hypothetical
           protein ZC21.9 protein.
          Length = 262

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 162 IFIHIYGDHSNIWQKSSCTANHIFFS-EPQLALG 260
           IF+ ++GD SN   KSS T   + F+ EP  A G
Sbjct: 168 IFVEVHGDDSNTTTKSSPTLEFVQFTLEPPSADG 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,893,141
Number of Sequences: 27780
Number of extensions: 387720
Number of successful extensions: 896
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)