Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_E23
(699 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 303 2e-83
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 140 2e-34
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 135 7e-33
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 123 2e-29
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 105 6e-24
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 101 7e-23
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 97 3e-21
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 91 1e-19
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 90 3e-19
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 88 1e-18
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 85 1e-17
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 81 1e-16
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 79 6e-16
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 79 8e-16
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 77 2e-15
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 68 1e-12
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 67 3e-12
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 65 1e-11
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 63 3e-11
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 63 4e-11
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 62 7e-11
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 58 2e-09
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 49 7e-07
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 46 5e-06
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 46 5e-06
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 44 2e-05
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 35 0.010
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 35 0.010
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 34 0.017
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 30 0.28
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 30 0.28
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 29 0.85
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 27 3.4
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 26 4.5
SPBC2G2.08 |ade9||C-1-tetrahydrofolatesynthase/methylenetetrahyd... 26 4.5
SPBP22H7.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 6.0
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 303 bits (743), Expect = 2e-83
Identities = 143/219 (65%), Positives = 173/219 (78%)
Frame = -3
Query: 697 DMRRDVQEIFRXTPHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKLHGLQQH 518
DMRRD+QE+FR TP KQVMM SATLS EIRP+CKKFMQ+P+E+YVDDE KL LHGLQQH
Sbjct: 214 DMRRDIQEVFRATPPQKQVMMFSATLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQH 273
Query: 517 YVXXXXXXXXXXXXXXLDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDE 338
YV LD LEFNQVVIFVKSV R L +LL + NFP+I IH + Q+E
Sbjct: 274 YVKLEEKAKNRKINDLLDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEE 333
Query: 337 RLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKG 158
R+ RY+ FKDF KRI VAT++FGRG+DIERVNIV NYDMP+ D+YLHRV RAGRFGTKG
Sbjct: 334 RIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKG 393
Query: 157 LAITMISDENDAKILNQVQDRFDVNITELPEEIELSTYI 41
LAIT S E D++IL+++Q+RF+VNITELP+EI++ +Y+
Sbjct: 394 LAITFSSSEEDSQILDKIQERFEVNITELPDEIDVGSYM 432
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 140 bits (339), Expect = 2e-34
Identities = 69/212 (32%), Positives = 122/212 (57%), Gaps = 1/212 (0%)
Frame = -3
Query: 691 RRDVQEIFRXTPHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKLHGLQQHYV 512
+ + +I+R P G QV++ SATL +++ + KF +P+ + V + +L L GL+Q+++
Sbjct: 181 KEQIYDIYRYLPPGTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRD-ELTLEGLKQYFI 239
Query: 511 XXXXXXXXXXXXXXL-DVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDER 335
L D L Q VIF S ++ L + + + NF +H M Q ER
Sbjct: 240 AVEKEEWKFDTLCDLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKER 299
Query: 334 LSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGL 155
+ Q F+ R+L+ T+++ RG+D+++V++V NYD+P + + Y+HR+ R+GRFG KG+
Sbjct: 300 DAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGV 359
Query: 154 AITMISDENDAKILNQVQDRFDVNITELPEEI 59
AI +++E D +IL ++ + I E+P I
Sbjct: 360 AINFVTNE-DVRILRDIEQYYSTVIDEMPMNI 390
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 135 bits (326), Expect = 7e-33
Identities = 65/209 (31%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
Frame = -3
Query: 682 VQEIFRXTPHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKLHGLQQHYVXXX 503
+ +IF+ P QV++ SAT+ +++ V KFM+DP+ + V + +L L G++Q YV
Sbjct: 182 IYDIFQLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKD-ELTLEGIKQFYVAVE 240
Query: 502 XXXXXXXXXXXL-DVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSR 326
L + + Q VIF + ++ L + LT+++F +H +M Q +R +
Sbjct: 241 KEEWKLDTLCDLYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTL 300
Query: 325 YQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAIT 146
+F+ RIL+ T+L RG+D+++V++V NYD+P + + Y+HR+ R GRFG KG++I
Sbjct: 301 MHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSIN 360
Query: 145 MISDENDAKILNQVQDRFDVNITELPEEI 59
++++ D +++ +++ ++ +I E+P I
Sbjct: 361 FVTND-DVRMMREIEQFYNTHIEEMPMNI 388
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 123 bits (297), Expect = 2e-29
Identities = 67/214 (31%), Positives = 111/214 (51%)
Frame = -3
Query: 682 VQEIFRXTPHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKLHGLQQHYVXXX 503
++++ P +Q+ + SAT ++ K + P E+ + DE L L G+ Q+Y
Sbjct: 207 IEQLLSYFPKNRQISLYSATFPLIVKNFMDKHLNKPYEINLMDE--LTLRGVTQYYAFVD 264
Query: 502 XXXXXXXXXXXLDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRY 323
L+ NQ +IF S R LA+ +T+ + H M Q R +
Sbjct: 265 ESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVF 324
Query: 322 QQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITM 143
F++ R LV ++L RG+DI+ VN+V N+D P++++TYLHR+ R+GRFG +GLAI+
Sbjct: 325 HNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHRGLAISF 384
Query: 142 ISDENDAKILNQVQDRFDVNITELPEEIELSTYI 41
IS D L ++++ I +P I+ S Y+
Sbjct: 385 IS-WADRFNLYRIENELGTEIQPIPPSIDPSLYV 417
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 105 bits (252), Expect = 6e-24
Identities = 55/182 (30%), Positives = 95/182 (52%)
Frame = -3
Query: 682 VQEIFRXTPHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKLHGLQQHYVXXX 503
+ +I + PH ++ ++ SAT++ ++ + + + P+ V V + + L Q Y+
Sbjct: 210 IDKILKIIPHERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFST-VDTLIQRYLFFP 268
Query: 502 XXXXXXXXXXXLDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRY 323
++ L N ++IF ++V LA LL F AI +H ++Q RL
Sbjct: 269 FKHKDTYLVYLVNELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGAL 328
Query: 322 QQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITM 143
+FK + LVAT++ RG+DI V++V NYD+P DS Y+HRV R R G G +I +
Sbjct: 329 NKFKSGARSTLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIAL 388
Query: 142 IS 137
++
Sbjct: 389 VT 390
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 101 bits (243), Expect = 7e-23
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 7/206 (3%)
Frame = -3
Query: 658 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKLHGLQQHYVXXXXXXXXXXX 479
P Q+++ SAT S+ + ++F + E+ + E +L + G++Q Y+
Sbjct: 284 PRNTQIVLFSATFSERVEKYAERFAPNANEIRLKTE-ELSVEGIKQLYMDCQSEEHKYNV 342
Query: 478 XXXL-DVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQ 302
L +L Q +IF K +A+ +T + N+ +R + F+
Sbjct: 343 LVELYGLLTIGQSIIFCKKKDTAEEIARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGT 402
Query: 301 KRILVATNLFGRGMDIERVNIVFNYDMP------EDSDTYLHRVARAGRFGTKGLAITMI 140
++LV TN+ RG+D+ +VN+V NYDMP D TYLHR+ R GRFG G++I +
Sbjct: 403 SKVLVTTNVIARGIDVSQVNLVVNYDMPLDQAGRPDPQTYLHRIGRTGRFGRVGVSINFV 462
Query: 139 SDENDAKILNQVQDRFDVNITELPEE 62
D+ + +N +Q+ F IT +P +
Sbjct: 463 HDKKSWEEMNAIQEYFQRPITRVPTD 488
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 96.7 bits (230), Expect = 3e-21
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 3/208 (1%)
Frame = -3
Query: 649 KQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKLHGLQQHY-VXXXXXXXXXXXXX 473
+Q +M SAT KE++ + + ++ D ++V V H ++Q V
Sbjct: 301 RQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKD 360
Query: 472 XLDVLEF--NQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQK 299
+VL+ N+V+IF + + + + L +PA+ IH + QDER +F+ +
Sbjct: 361 IEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKS 420
Query: 298 RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAK 119
I+VAT++ RG+D++ + VFNYD P +++ Y+HR+ R GR G KG A T + +N +
Sbjct: 421 PIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQ 480
Query: 118 ILNQVQDRFDVNITELPEEIELSTYIEG 35
V + P+ E++ Y G
Sbjct: 481 ARELVSILSEAKQDIDPKLEEMARYSSG 508
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 91.5 bits (217), Expect = 1e-19
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 3/208 (1%)
Frame = -3
Query: 685 DVQEIFRXTPHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKLHGLQQHYVXX 506
++ EI + P +Q M+ SAT++ ++ + + + P+ V+VD++ K L Q +V
Sbjct: 425 ELNEIIQACPKSRQTMLFSATMTDKVDDLIRLSLNRPVRVFVDNK-KTTAKLLTQEFVRV 483
Query: 505 XXXXXXXXXXXXLDV---LEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDER 335
+ + L + +IF +S + + + A IH +++Q++R
Sbjct: 484 RPQRELLRPAMLIYLCKELFHRRTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQR 543
Query: 334 LSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGL 155
+ + F+D + L+AT++ RG+DI+ + +V NY+ P + YLHRV R R G G
Sbjct: 544 VRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLHRVGRTARAGRSGR 603
Query: 154 AITMISDENDAKILNQVQDRFDVNITEL 71
AIT ++ E D K+L V T+L
Sbjct: 604 AIT-LAGEGDRKVLKGVFKNSSAQNTKL 630
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 89.8 bits (213), Expect = 3e-19
Identities = 52/174 (29%), Positives = 83/174 (47%)
Frame = -3
Query: 649 KQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKLHGLQQHYVXXXXXXXXXXXXXX 470
+Q +M SAT ++I+ + + F++D + + V + Q+
Sbjct: 365 RQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLDIL 424
Query: 469 LDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRIL 290
+ +IFV++ + L L + NFPA IH + TQ ER + F+ + I+
Sbjct: 425 HTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIM 484
Query: 289 VATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDEN 128
VAT + RG+DI V V NYD+P D D Y+HR+ R GR G G A+ + N
Sbjct: 485 VATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNN 538
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 88.2 bits (209), Expect = 1e-18
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 8/212 (3%)
Frame = -3
Query: 685 DVQEIFRXTP--HGKQVMMXSATLSKEIRPVC---KKFMQDPMEVYVDDEAKLKLHG-LQ 524
D+ + F P +Q ++ +AT++ IR + +K + P+ +Y + + + LQ
Sbjct: 173 DLDDCFSVLPASEDRQTLLFTATVTDAIRQLKYQPQKNNKPPLWLYEVETDNISVPSTLQ 232
Query: 523 QHYVXXXXXXXXXXXXXXLDVLEF--NQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNM 350
Q Y+ L + E +IFV + + +L +H M
Sbjct: 233 QSYIFVSSQVREAYLVHLLTIPENAKKSAIIFVNRTRTAELIYSILRLLELRVTELHSEM 292
Query: 349 TQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRF 170
Q ER++ +F+ +ILVAT++ RG+DI V +V N+D+P D D Y+HRV R R
Sbjct: 293 VQRERINSLGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLPRDPDDYIHRVGRTARA 352
Query: 169 GTKGLAITMISDENDAKILNQVQDRFDVNITE 74
G G +I++++ E D +++ ++DR ++E
Sbjct: 353 GRSGESISIVT-ERDVDLVHAIEDRVGTKLSE 383
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 84.6 bits (200), Expect = 1e-17
Identities = 50/178 (28%), Positives = 94/178 (52%), Gaps = 4/178 (2%)
Frame = -3
Query: 649 KQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKLHGLQQHYVXXXXXXXXXXXXXX 470
+Q +M SATL + + K ++ +P+ + + + + + ++Q
Sbjct: 450 RQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQA-VDRVEQRV--EMISDDSKKWRRV 506
Query: 469 LDVLEFNQ----VVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQ 302
++LE N+ ++IFV + A+A+ L + A+ +H + +Q++R +Q ++
Sbjct: 507 EEILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKT 566
Query: 301 KRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDEN 128
ILVAT++ GRG+DI V++V NY+M + + Y HR+ R GR G G AIT + E+
Sbjct: 567 ADILVATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPED 624
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 81.4 bits (192), Expect = 1e-16
Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 3/179 (1%)
Frame = -3
Query: 685 DVQEIFRXTP-HGKQVMMXSATLSKEIRPVCKKFMQD-PMEVYVDD-EAKLKLHGLQQHY 515
++++I + P +Q ++ SAT + ++ + + ++ P+ V VD + + GL+Q Y
Sbjct: 256 EMRQIMKILPSENRQTLLFSATQTTKVEDLARISLKPGPLYVNVDSGKPTSTVEGLEQGY 315
Query: 514 VXXXXXXXXXXXXXXLDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDER 335
V L +V++F+ S +A+LL + P + +H Q R
Sbjct: 316 VVVDSDKRFLLLFSFLKRNLKKKVIVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRR 375
Query: 334 LSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKG 158
+ + +F + +K IL+ TN+ RG+DI V+ + YD P+D Y+HRV R R GTKG
Sbjct: 376 TNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVGRTAR-GTKG 433
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 79.0 bits (186), Expect = 6e-16
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 4/213 (1%)
Frame = -3
Query: 682 VQEIFRXTPHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKLHGLQQHYVXXX 503
V I +Q ++ SAT + + + +K ++ P+E+ V + + ++Q
Sbjct: 589 VMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASE-VEQIVEVRP 647
Query: 502 XXXXXXXXXXXLDVLEFNQV----VIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDER 335
L L NQ+ ++FV + AL L + + + IH Q +R
Sbjct: 648 EESKFSRLLELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDR 707
Query: 334 LSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGL 155
S +K +L+AT++ RG+D++ + +V NYD P + Y+HRV R GR G G+
Sbjct: 708 DSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGV 767
Query: 154 AITMISDENDAKILNQVQDRFDVNITELPEEIE 56
A+T I+ E + K + ++ +P+E++
Sbjct: 768 AVTFITPEQE-KYAVDIAKALKMSKQPVPKELQ 799
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 78.6 bits (185), Expect = 8e-16
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 13/200 (6%)
Frame = -3
Query: 688 RDVQEIFRXTPH-----GKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKLHGLQ 524
+D++ I TP +Q + SAT + +R + F++DP+++ + + +
Sbjct: 328 QDIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNIT 387
Query: 523 QHYVXXXXXXXXXXXXXXLDVL--------EFNQVVIFVKSVQRCIALAQLLTDQNFPAI 368
Q + ++L + ++++IFV + + L + + +
Sbjct: 388 Q--IVEILDDPRSKERMLDNLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLA-RKYNVV 444
Query: 367 GIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRV 188
GIH +M+Q RL FK + +LVAT++ RG+DI +V +V N P + Y+HR+
Sbjct: 445 GIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRI 504
Query: 187 ARAGRFGTKGLAITMISDEN 128
R GR TKG AIT + ++
Sbjct: 505 GRTGRANTKGTAITFFTPQD 524
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 77.4 bits (182), Expect = 2e-15
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Frame = -3
Query: 448 QVVIFVKSVQRCIAL-AQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLF 272
+VVIFV+ ++R AL +LL D+ + IH + Q +R +F+ + +L+AT+L
Sbjct: 290 RVVIFVQDIERAKALYTELLFDEIHVGV-IHGELPQAKREEALAKFRKGEIWVLIATDLL 348
Query: 271 GRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDEN 128
RG+D V +V N+D P+ +Y+HR+ R GR G G A+T + E+
Sbjct: 349 ARGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFTKED 396
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 67.7 bits (158), Expect = 1e-12
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Frame = -3
Query: 460 LEFNQVVIFVKSVQRCIALAQLLTDQNFP--AIGIHRNMTQDERLSRYQQFKDFQKR-IL 290
+E+ + ++F S L P + +H Q R +++FK K+ +L
Sbjct: 254 IEYEKAIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQSNRSRNFEKFKKSNKKTVL 313
Query: 289 VATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILN 110
T++ RG+DI V+ V D P D ++ HR RAGR G G+AI +++D + +
Sbjct: 314 FTTDIASRGLDIPNVDFVLQLDPPLDPKSFSHRCGRAGRAGRAGVAIVLLNDGREEEYEE 373
Query: 109 QVQDRFDVNITELPEEIE 56
++ R V IT + IE
Sbjct: 374 LLRVR-KVPITRIDTPIE 390
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 66.9 bits (156), Expect = 3e-12
Identities = 30/102 (29%), Positives = 54/102 (52%)
Frame = -3
Query: 448 QVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFG 269
+ ++F ++ + L + P+ +H + Q +RL ++FK+ K +LV T++
Sbjct: 391 KTMVFANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCTDVAA 450
Query: 268 RGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITM 143
RG+DI V V +Y +P +D Y+HR R R G++I M
Sbjct: 451 RGIDIPSVTHVIHYHVPHTADMYVHRSGRTARANEDGVSILM 492
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 64.9 bits (151), Expect = 1e-11
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 5/195 (2%)
Frame = -3
Query: 691 RRDVQEIFRXTPHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYV-DDEAKLKLHGLQQHY 515
R + I P +Q M+ SAT +K ++ + + +Q+P + V +++ L Q Y
Sbjct: 203 RTTLDAIVSSLPVHRQTMLFSATQTKSVKDLARLSLQNPDFISVHENDTSSTPSNLNQFY 262
Query: 514 VXXXXXXXXXXXXXXLDV-LEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGI---HRNMT 347
+ + L+F + ++F+ S ++ + + P I + H
Sbjct: 263 LTVPLTEKLDILFGFIRTHLKF-KTIVFLSSCKQVRFVYETFRRMR-PGISLLHLHGKQK 320
Query: 346 QDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFG 167
Q R +F + +L T++ RG+D V+ V D PED DTY+HRV R R+
Sbjct: 321 QTTRTEVTAKFTSSRHVVLFCTDIVARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTARYN 380
Query: 166 TKGLAITMISDENDA 122
G A+ ++ +A
Sbjct: 381 RSGNALLLLLPSEEA 395
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 63.3 bits (147), Expect = 3e-11
Identities = 31/114 (27%), Positives = 59/114 (51%)
Frame = -3
Query: 451 NQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLF 272
+ ++FV + +++LL + I+ ++ Q+ RL+ F+ + +LV T++
Sbjct: 347 DSTLVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVA 406
Query: 271 GRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILN 110
RG+DI + V NYD P ++HRV R R G G A +++ E+ +L+
Sbjct: 407 SRGIDIPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAYSLVRAEDAGYLLD 460
Score = 33.5 bits (73), Expect = 0.030
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -3
Query: 676 EIFRXTPHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKL 542
EI P +Q ++ SATL + + K +QDP+ V +D E+K+
Sbjct: 236 EILHALPTSRQTLLFSATLPRTLVDFAKAGLQDPVLVRLDVESKV 280
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 62.9 bits (146), Expect = 4e-11
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Frame = -3
Query: 364 IHRNMTQDERLSRYQQF---KDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLH 194
+H +++Q R S F +D IL+ T++ RG+D+ V++V YD P +D YLH
Sbjct: 473 LHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDDYLH 532
Query: 193 RVARAGRFGTKGLAITMISDENDAKILNQVQDRFDVNITELP 68
R+ R R G G AI + + +++ +N ++ NI E P
Sbjct: 533 RIGRTARAGHNGAAIMFLLPK-ESEYINLLKSSVSANILEQP 573
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 62.1 bits (144), Expect = 7e-11
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = -3
Query: 451 NQVVIFVKSVQRCIALAQLLTDQ-NFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNL 275
+++++F+ ++ + +L + P +H +T +R S + F+ Q IL AT++
Sbjct: 293 SRIIVFLPTISMVDFVGGVLENHLKIPCFILHSGLTTAQRRSITESFRKCQSGILFATDV 352
Query: 274 FGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQ 101
RGMD + V P ++D Y+HR+ R GR G G A +I E + LN ++
Sbjct: 353 VARGMDFPNITQVVQITGPSNTDDYIHRIGRTGRAGKTGEAY-LILLEQEKPFLNSIK 409
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 57.6 bits (133), Expect = 2e-09
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Frame = -3
Query: 445 VVIFVKSVQRCIALAQLLT------DQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVA 284
++ FVKS + L +LL +Q+F ++++DER +F +LV
Sbjct: 434 ILCFVKSNEAAARLHRLLELIHESLNQSFSCGLFTSSLSRDERKKIISRFATGDLNLLVC 493
Query: 283 TNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMI 140
++L RG+D+ V NYD P +Y+HR+ R R G +G A T++
Sbjct: 494 SDLMARGIDVANTQNVINYDPPLSVRSYVHRIGRTARAGREGFAWTLV 541
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 48.8 bits (111), Expect = 7e-07
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = -3
Query: 343 DERLSRYQQFKDFQKRILVATNLFG--RGMDIERVNIVFNYDMPEDSDTYLHRVARAGRF 170
DE + + K +K+ + +G RG+D E V V N+DMP ++ +Y+HR+ R R
Sbjct: 361 DESILAAAKDKSKKKKRVKQDKEYGVARGLDFENVACVLNFDMPSNTKSYIHRIGRTARA 420
Query: 169 GTKGLAITMISDEND 125
G G A++ + +++
Sbjct: 421 GKPGTAMSFVVPKSE 435
Score = 46.0 bits (104), Expect = 5e-06
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Frame = -3
Query: 685 DVQEIFRXTPHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYV-DDEAKLKLHGLQQHYVX 509
D++ + R P G Q + SATLSK I + K ++P + V D EA K L Q+ V
Sbjct: 184 DMKTLSRSLPRGTQSFLMSATLSKNIASLQKLVCRNPFILAVKDKEASGK---LTQYVVK 240
Query: 508 XXXXXXXXXXXXXLDV-LEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERL 332
L + L +++IFV + RC L L ++ ++ + + RL
Sbjct: 241 CSEQDKFLLAYILLKLRLIKGKILIFVNEINRCYRLKLFLEQFGLKSLVLNSELPVNSRL 300
Query: 331 SRYQQFKDFQKRILVATNLFGRGMDIERV 245
+Q+ +I++AT+ G +IE +
Sbjct: 301 HILEQYNKGLYQIIIATDESGMMGEIEEL 329
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 46.0 bits (104), Expect = 5e-06
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = -3
Query: 355 NMTQDERLSRYQQFKDF--QKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVAR 182
+++ +ER + F++ + RI++AT FG G++ V +V +Y +P S Y+ R
Sbjct: 1452 DVSDEERQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGR 1511
Query: 181 AGRFGTKGLAITMISDENDAKILNQVQD 98
AGR G +A + ++ D+ + V+D
Sbjct: 1512 AGRDGKYAIA-ALFYEKYDSTWSSYVED 1538
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 46.0 bits (104), Expect = 5e-06
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = -3
Query: 355 NMTQDERLSRYQQFKDF--QKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVAR 182
+++ +ER + F++ + RI++AT FG G++ V +V +Y +P S Y+ R
Sbjct: 1452 DVSDEERQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGR 1511
Query: 181 AGRFGTKGLAITMISDENDAKILNQVQD 98
AGR G +A + ++ D+ + V+D
Sbjct: 1512 AGRDGKYAIA-ALFYEKYDSTWSSYVED 1538
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 44.0 bits (99), Expect = 2e-05
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = -3
Query: 442 VIFVKSVQRCIALA-QLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGR 266
+I+ S C +A +L D A H + + ER +++ +I+VAT FG
Sbjct: 746 IIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFGM 805
Query: 265 GMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMIS 137
G+D V V ++ P+ + Y RAGR G I S
Sbjct: 806 GVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYS 848
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 35.1 bits (77), Expect = 0.010
Identities = 28/129 (21%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Frame = -3
Query: 451 NQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRI---LVAT 281
++ ++F + Q + L +N+ + + + D+R S QF D + + +++T
Sbjct: 1204 HKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLST 1263
Query: 280 NLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFG-TKGLAITMISDEN--DAKILN 110
G G++++ + V +D + L RA R G TK + I + E + IL+
Sbjct: 1264 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEENILS 1323
Query: 109 QVQDRFDVN 83
+ Q + D++
Sbjct: 1324 RAQYKLDLD 1332
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 35.1 bits (77), Expect = 0.010
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = -3
Query: 352 MTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 173
M+Q + +QF+ + L+AT++ G+DI V+++ YD L R+ R GR
Sbjct: 476 MSQKLQNETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYDASASPIRMLQRMGRTGR 535
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 34.3 bits (75), Expect = 0.017
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = -3
Query: 352 MTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 173
M Q ++ QF+ LVAT++ G+DI +++ YD + R+ R GR
Sbjct: 515 MNQMQQKETIDQFRAGVINTLVATSIGEEGLDIGDTDMIICYDASSSPIRTIQRMGRTGR 574
Query: 172 FGTKGLAITMISDENDAK 119
+ + + + D D+K
Sbjct: 575 KKSGKVFVLLTEDCEDSK 592
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 30.3 bits (65), Expect = 0.28
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Frame = -3
Query: 448 QVVIFVKSVQRCIALAQLLTDQNFPAIGIHR------------NMTQDERLSRYQQFKDF 305
+ VIFV+ L+ + N P I H +MT + +FK
Sbjct: 363 RTVIFVERKATAFTLSLFMKTLNLPNIRAHSFIGHGPSDQGEFSMTFRRQKDTLHKFKTG 422
Query: 304 QKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGL 155
+ +L+AT + G+D+ N+V +++ Y+ RA +K L
Sbjct: 423 KYNVLIATAVAEEGIDVPSCNLVIRFNICRTVTQYVQSRGRARAMASKFL 472
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 30.3 bits (65), Expect = 0.28
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = -2
Query: 386 PELPCHWYPQKY-DPG*ASLPLS---TIQGLPKKDLGCNKLIWPRNGH 255
P++P HWYP P P+S I LPK + N+L P + H
Sbjct: 159 PQVPSHWYPVSLPSPNLPHQPISKPPVIPNLPKLQVHPNRLPHPIHNH 206
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 28.7 bits (61), Expect = 0.85
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -3
Query: 292 LVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMI 140
++ATN G+DI ++ V P + RAGR LA+ ++
Sbjct: 614 IIATNALELGIDIGSLDAVITIGFPYSLSNLRQQFGRAGRRNKSSLAVYIV 664
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 26.6 bits (56), Expect = 3.4
Identities = 24/125 (19%), Positives = 51/125 (40%), Gaps = 6/125 (4%)
Frame = -3
Query: 451 NQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRI---LVAT 281
+++++F + +Q+ L +N ++ ER S F + L++T
Sbjct: 888 HRILLFSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLST 947
Query: 280 NLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMI---SDENDAKILN 110
G G+++ + V D + + +ARA R+G K + + D + KI+
Sbjct: 948 RAGGVGINLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQ 1007
Query: 109 QVQDR 95
Q +
Sbjct: 1008 NAQKK 1012
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 129 FSSDIIVMARPLVPNLPAR 185
+S+DI + A PLVP+LP +
Sbjct: 706 YSTDIPLKAEPLVPDLPVK 724
>SPBC2G2.08 |ade9||C-1-
tetrahydrofolatesynthase/methylenetetrahydrofolatedehydr
ogenase/methylenetetrahydrofolatecyclohydrolase/formylte
trahydrofolatesynthetase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 119 LGIIFIRYHSNGQTFGTKPSCAG 187
LGI +R S G TFG K AG
Sbjct: 425 LGIACVRQPSQGPTFGVKGGAAG 447
>SPBP22H7.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 181
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 23 LNLSSFDVGRELNFFRQLCNVNIETILYLV*DLGIIFIRY 142
L+ F GR+LN F VNI T++ L L ++FI Y
Sbjct: 127 LHNEDFYDGRDLNIFTLRGFVNILTLILLSCGLLMLFIGY 166
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,793,822
Number of Sequences: 5004
Number of extensions: 56309
Number of successful extensions: 181
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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