Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_E22
         (834 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0823 + 21765960-21766064,21766166-21766327,21766616-217667...   101   7e-22
05_01_0139 + 929343-930188                                             32   0.65 
11_04_0407 + 17335773-17335777,17335930-17336635,17336844-173375...    29   6.0  
08_01_0987 + 9979651-9979746,9979818-9980058,9980947-9981090,998...    29   6.0  
01_06_1815 - 40064351-40064887,40064987-40065634,40065834-400658...    29   6.0  

>07_03_0823 +
           21765960-21766064,21766166-21766327,21766616-21766741,
           21766831-21766956,21767519-21767698,21768204-21768452
          Length = 315

 Score =  101 bits (242), Expect = 7e-22
 Identities = 42/104 (40%), Positives = 67/104 (64%)
 Frame = -1

Query: 828 EVKSGRXEWSPVHKSAKFWRENAARLNERGQELLRTLVHLLEKSRDPVVLAVACYDIGEY 649
           +V  G  +WSP+HK   FWREN     E   ++LR L+ +++ S D   LAVACYD+ ++
Sbjct: 202 QVLLGHLDWSPMHKDPSFWRENINNFEENDFQILRVLMTIIDTSADTTALAVACYDLSQF 261

Query: 648 VRHYPRGKHIIEQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMV 517
           ++++P G+ ++  L  K RVM L++H++  VR  ALL VQ+L +
Sbjct: 262 LQYHPSGRIVVADLKAKDRVMKLMNHENAEVRKNALLCVQRLFL 305


>05_01_0139 + 929343-930188
          Length = 281

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -1

Query: 684 VLAVACYDIGEYVRHYPRGKHI--IEQLGGKQRVMYLL 577
           ++ VA Y  G+  RH PRGKHI  +  L G    M LL
Sbjct: 95  MVTVAGYTAGQRARHVPRGKHIAAVSILAGTSVTMALL 132


>11_04_0407 +
           17335773-17335777,17335930-17336635,17336844-17337542,
           17340710-17340724,17341479-17342126
          Length = 690

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = +1

Query: 586 HDTLFTTKLFDDVFAARIVAHIF--SDVIASDGEYDRIAALLEQVHQGAKQFLTTFVQTS 759
           HD      L +   +  +VA +F  +  + +  +   +A  +E  H G KQFL    QTS
Sbjct: 459 HDYTHRLSLTEKEASTNLVAELFRTNSQMGTQAQSGALAITVEAEHDGVKQFLGDNAQTS 518


>08_01_0987 +
           9979651-9979746,9979818-9980058,9980947-9981090,
           9981253-9981313,9981603-9982061,9982472-9982529,
           9983579-9983839
          Length = 439

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 616 DDVFAARIVAHIFSDVIASDGEYDRIAALLEQVHQGAKQFLTTFVQ 753
           DD+F AR VA    D  A + +  RIA +  +  +GA   + T VQ
Sbjct: 364 DDLFTARFVAATNGDEDAEEMQRYRIARMATKEAEGAAGGVATMVQ 409


>01_06_1815 -
           40064351-40064887,40064987-40065634,40065834-40065890,
           40065921-40065941,40066714-40066941
          Length = 496

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -1

Query: 756 RLNE-RGQELLRTLVHLLEKSRDPVVLAVACYDIGEYVRHYPR 631
           R+ E R  E+LRTL+  L  +   V++  AC+  G Y+  Y R
Sbjct: 266 RMQETRDAEILRTLIDFLVSA---VIVMSACFGYGTYIYSYQR 305


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,441,195
Number of Sequences: 37544
Number of extensions: 396729
Number of successful extensions: 919
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)