Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_E12
(804 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 393 e-110
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 296 2e-81
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 282 4e-77
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 279 3e-76
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 270 1e-73
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 262 3e-71
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 202 3e-53
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 199 4e-52
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 189 5e-49
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 174 1e-44
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 173 2e-44
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 163 2e-41
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 163 2e-41
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 155 7e-39
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 143 3e-35
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 140 2e-34
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 134 1e-32
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 126 3e-30
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 126 5e-30
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 117 2e-27
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 78 2e-15
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 42 1e-04
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 33 0.047
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 32 0.11
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 32 0.11
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 31 0.14
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 31 0.14
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 31 0.19
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 31 0.19
SPCC1442.07c |||ubiquitin/metalloprotease fusion protein|Schizos... 31 0.25
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 30 0.33
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 29 0.77
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 29 1.0
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 1.4
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 28 1.4
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 1.4
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 28 1.8
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 27 2.4
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 27 3.1
SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|... 27 3.1
SPBC216.06c |swi1||replication fork protection complex subunit S... 27 4.1
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 27 4.1
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 4.1
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 26 5.5
SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces pomb... 26 5.5
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 5.5
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 26 5.5
SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces po... 26 7.2
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S... 25 9.5
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 25 9.5
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 25 9.5
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 393 bits (967), Expect = e-110
Identities = 191/244 (78%), Positives = 213/244 (87%), Gaps = 1/244 (0%)
Frame = -3
Query: 766 RKFKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 587
++ KE+VELP THPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSE
Sbjct: 201 QEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSE 260
Query: 586 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLN 407
LIQKYLGDGP+LVR+LF AEEH+PSIVFIDEIDA+GTKRYD+ SG EREIQRTMLELLN
Sbjct: 261 LIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLN 320
Query: 406 QLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMT 230
QLDGFD S+ D+KVIMATNRI LDPALIRPGRIDRKI F PDE TKR+IFTIHTS+M
Sbjct: 321 QLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMN 380
Query: 229 LADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVXYRKKEG 50
L +DVNL ELI KDDLSGA+IKAI +EAGL+ALRERRM+V +DF++++E V K EG
Sbjct: 381 LGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVLKTKDEG 440
Query: 49 TPEG 38
P G
Sbjct: 441 GPAG 444
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2
Query: 803 TYADIGGLDTQXQEIQ 756
+YADIGGL++Q QEI+
Sbjct: 189 SYADIGGLESQIQEIK 204
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 296 bits (727), Expect = 2e-81
Identities = 136/240 (56%), Positives = 181/240 (75%), Gaps = 1/240 (0%)
Frame = -3
Query: 766 RKFKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 587
++ KE +ELP HPE +E +GI PKG++LYGPPGTGKTLLA+AVA+ T F+RV GSE
Sbjct: 155 KEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSE 214
Query: 586 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG-GEREIQRTMLELL 410
L+QKY+G+G ++VRELF +A EHAPSI+F+DEID++G+ R DS+ G G+ E+QRTMLELL
Sbjct: 215 LVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELL 274
Query: 409 NQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMT 230
NQLDGF++ ++KVIMATNRI+ LDPAL+RPGRIDRKIEFP P + + I IH+ M
Sbjct: 275 NQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMN 334
Query: 229 LADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVXYRKKEG 50
L ++L + + SGA++K +CTEAG+ ALRERR+ VT EDF+ + V + G
Sbjct: 335 LTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVLNKGDSG 394
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 282 bits (692), Expect = 4e-77
Identities = 128/229 (55%), Positives = 179/229 (78%), Gaps = 1/229 (0%)
Frame = -3
Query: 766 RKFKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 587
++ +E+VELP T + Y ++GI PP+GV+LYGPPGTGKT+L KAVAN T+A F+RVVGSE
Sbjct: 144 QEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSE 203
Query: 586 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLN 407
+QKYLG+GP++VR++FR+A E+AP+I+FIDEIDA+ TKR+D+ +G +RE+QR ++ELL
Sbjct: 204 FVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLT 263
Query: 406 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP-LPDEKTKRRIFTIHTSRMT 230
Q+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEFP D + +R +F T++M
Sbjct: 264 QMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKML 323
Query: 229 LADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS 83
L+ +V+L IM D SGA I AI +AGL+A+R+ R + D +++
Sbjct: 324 LSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEA 372
Score = 28.7 bits (61), Expect = 1.0
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -2
Query: 803 TYADIGGLDTQXQEIQ 756
+YAD+GGLD Q QE++
Sbjct: 132 SYADVGGLDVQKQEVR 147
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 279 bits (684), Expect = 3e-76
Identities = 124/234 (52%), Positives = 177/234 (75%)
Frame = -3
Query: 754 ESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 575
E++ LP + + ++G+KPPKG +++GPPGTGKTLLA+A A Q++ATFL++ +L+Q
Sbjct: 199 EAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQM 258
Query: 574 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDG 395
++GDG KLVR+ F +A+E +P+I+FIDE+DA+GTKR+DS G+RE+QRTMLELLNQLDG
Sbjct: 259 FIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 318
Query: 394 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDV 215
F S VKVI ATNR++TLDPAL+R GR+DRK+EFPLP+E+ + I IH+ +M + DD+
Sbjct: 319 FSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDI 378
Query: 214 NLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVXYRKKE 53
N EL S D+ +GA +K++C EAG++ALR+ K+ +E F V RK +
Sbjct: 379 NWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMRKSK 432
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 270 bits (663), Expect = 1e-73
Identities = 122/231 (52%), Positives = 167/231 (72%)
Frame = -3
Query: 763 KFKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 584
+ +E VELP PE + ++GI PPKG++LYGPPGTGKTL A+AVAN+T ATF+RV+GSEL
Sbjct: 190 RLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSEL 249
Query: 583 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQ 404
+QKY+G+G ++VRELF +A I+F DEIDA+G R+D +GG+ E+QRTMLEL+ Q
Sbjct: 250 VQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQ 309
Query: 403 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLA 224
LDGFD RG++KV+ ATNR TLD AL+RPGRIDRK+EF LPD + + I IH M +
Sbjct: 310 LDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAID 369
Query: 223 DDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESV 71
D+ + +GA+++++CTEAG+ A+R RR T +DF + + V
Sbjct: 370 KDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKV 420
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 262 bits (643), Expect = 3e-71
Identities = 119/241 (49%), Positives = 169/241 (70%), Gaps = 1/241 (0%)
Frame = -3
Query: 766 RKFKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 587
R+ +E +ELP +PE + +GIKPPKGV+LYGPPGTGKTLLA+AVA FL+VV S
Sbjct: 142 RELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSA 201
Query: 586 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLN 407
++ KY+G+ +++RE+F A+EH P ++F+DEIDA+G +R+ + +REIQRT++ELLN
Sbjct: 202 IVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 261
Query: 406 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTL 227
Q+DGFD G K+IMATNR +TLDPAL+RPGR+DRKIE PLP+E + I IH +++
Sbjct: 262 QMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSK 321
Query: 226 ADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVXYRKK-EG 50
+++ L+ D +GAD++ + TEAG +A++E R V D + V KK EG
Sbjct: 322 QGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKKLEG 381
Query: 49 T 47
T
Sbjct: 382 T 382
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 202 bits (494), Expect = 3e-53
Identities = 94/215 (43%), Positives = 146/215 (67%)
Frame = -3
Query: 763 KFKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 584
+ +E VELP HP+ ++ +GIKPP+G+++YGPPGTGKTL+A+AVAN+T A F + G E+
Sbjct: 235 QIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEI 294
Query: 583 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQ 404
+ K G+ +R+ F AE+++P+I+FIDEID++ KR +N GE E +R + +LL
Sbjct: 295 MSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTN--GEVE-RRVVSQLLTL 351
Query: 403 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLA 224
+DG +R +V V+ ATNR ++DPAL R GR DR+++ +PD + I IHT M LA
Sbjct: 352 MDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLA 411
Query: 223 DDVNLSELIMSKDDLSGADIKAICTEAGLMALRER 119
DDV+L ++ G+D+ ++C+EA + +RE+
Sbjct: 412 DDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREK 446
Score = 178 bits (434), Expect = 7e-46
Identities = 89/231 (38%), Positives = 143/231 (61%)
Frame = -3
Query: 766 RKFKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 587
R+ +E+V++P + E + G+ P KGV+ +GPPGTGKTLLAKA+AN+ SA F+ V G E
Sbjct: 507 RELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPE 566
Query: 586 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLN 407
L+ + G+ VR++F A AP +VF+DE+D++ R +++G R + +LL
Sbjct: 567 LLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKAR-GASAGDSGGGDRVVNQLLT 625
Query: 406 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTL 227
++DG +S+ +V VI ATNR + +DPAL+RPGR+D+ I PLPDE+ + I +
Sbjct: 626 EMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPV 685
Query: 226 ADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKES 74
A+DV+L + + SGAD++ + A +A+++ ED K+ E+
Sbjct: 686 AEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDS----IEEDIKRENET 732
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 199 bits (485), Expect = 4e-52
Identities = 93/215 (43%), Positives = 142/215 (66%)
Frame = -3
Query: 766 RKFKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 587
+K KESVE P TH E + +G++PPKGV+LYGPPG KT+ AKA+A +T F+ V G E
Sbjct: 558 QKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPE 617
Query: 586 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLN 407
L K++G+ + VR++F+ A + +PS++F DEIDA+ R + NS R + LLN
Sbjct: 618 LFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRGEDNSS-----DRVVAALLN 672
Query: 406 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTL 227
+LDG ++ +V V+ ATNR + +DPAL+RPGR+DR + P+ + +++I I +M
Sbjct: 673 ELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKF 732
Query: 226 ADDVNLSELIMSKDDLSGADIKAICTEAGLMALRE 122
A+DV+L + + SGA++ A+C EAGL+A+ E
Sbjct: 733 AEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHE 767
Score = 164 bits (398), Expect = 1e-41
Identities = 86/214 (40%), Positives = 128/214 (59%), Gaps = 1/214 (0%)
Frame = -3
Query: 763 KFKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 584
+ ++ VELP +PE ++ I PP+GV+LYGPPGTGKT++ +AVA + +A + G +
Sbjct: 290 QIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSV 349
Query: 583 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQ 404
+ KYLG+ +R++F A H PSI+FIDEIDA+ KR + S E R + LL
Sbjct: 350 VGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAE---SRAVATLLTL 406
Query: 403 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRM-TL 227
LDG + G V VI ATNR ++D AL RPGR++++IE +PD+ + I + S +
Sbjct: 407 LDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNE 466
Query: 226 ADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 125
+D L +L GAD+ A+ EA L A++
Sbjct: 467 INDAQLEDLASRTHAYVGADLAAVVREAALRAIK 500
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 189 bits (460), Expect = 5e-49
Identities = 96/223 (43%), Positives = 136/223 (60%), Gaps = 3/223 (1%)
Frame = -3
Query: 730 HPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKL 551
+P++YE +G K P+G IL GPPGTGKTLLAKA A + + FL V GSE ++ ++G GP
Sbjct: 317 NPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSR 376
Query: 550 VRELFRVAEEHAPSIVFIDEIDAVGTKR-YDSNSGGEREIQRTMLELLNQLDGFDSRGDV 374
VR+LF A ++AP I+FIDEIDA+G R G E + T+ +LL ++DGF S +
Sbjct: 377 VRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHI 436
Query: 373 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNL--SEL 200
V TNR + LDPAL+RPGR DR+I PD + +IF +H + AD+++L L
Sbjct: 437 VVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRL 496
Query: 199 IMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESV 71
+ +GADI +C E L+A R +V F+++ E V
Sbjct: 497 AVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAIERV 539
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 174 bits (423), Expect = 1e-44
Identities = 94/223 (42%), Positives = 133/223 (59%), Gaps = 4/223 (1%)
Frame = -3
Query: 727 PEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLV 548
P ++ +G K P+GV+L GPPGTGKT+LA+AVA + + F + GS+ + Y+G G K V
Sbjct: 289 PTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRV 348
Query: 547 RELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGD--- 377
RELF A + APSI+FIDE+DA+G KR N+ +++T+ +LL LDGF D
Sbjct: 349 RELFAAARKQAPSIIFIDELDAIGQKR---NARDAAHMRQTLNQLLVDLDGFSKNEDLAH 405
Query: 376 -VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSEL 200
V I ATN E+LDPAL RPGR DR I PLPD + + I HT + L DV+LS +
Sbjct: 406 PVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSII 465
Query: 199 IMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESV 71
+GAD+ + +A + A + V+ D + SK+ +
Sbjct: 466 ARGTSGFAGADLANLINQAAVYASKNLSTAVSMRDLEWSKDRI 508
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 779
Score = 173 bits (421), Expect = 2e-44
Identities = 89/207 (42%), Positives = 127/207 (61%), Gaps = 2/207 (0%)
Frame = -3
Query: 739 PXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 560
P PE Y+ +GI P GV+L+GPPG GKTLLAKAVAN++ A F+ + G EL+ KY+G+
Sbjct: 511 PIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGES 570
Query: 559 PKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 380
+ VR++F A +P ++F DE+DA+ +R DS S + T LL +LDG R
Sbjct: 571 ERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNT---LLTELDGLSDRS 627
Query: 379 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSEL 200
V VI ATNR + +DPA++RPGR+D+ + LPD + I T + L ++VNL L
Sbjct: 628 GVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVL 687
Query: 199 IMSK--DDLSGADIKAICTEAGLMALR 125
+ + SGAD+ A+ EA + ALR
Sbjct: 688 GRDERCSNFSGADLAALVREAAVTALR 714
Score = 156 bits (378), Expect = 4e-39
Identities = 82/211 (38%), Positives = 121/211 (57%), Gaps = 1/211 (0%)
Frame = -3
Query: 754 ESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 575
E V +P HPE Y+ GI PP+GV+L+GPPG GKT+LA A+AN+ F+ + ++
Sbjct: 188 ELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSG 247
Query: 574 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDG 395
G+ K VRE+F A+ AP ++FIDEIDAV KR + ER I L +++L
Sbjct: 248 MSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCMDELSF 307
Query: 394 FDSRG-DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADD 218
+ G V VI ATNR ++LD AL R GR DR+I +P + + +I + L+ D
Sbjct: 308 EKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGLKLSGD 367
Query: 217 VNLSELIMSKDDLSGADIKAICTEAGLMALR 125
+ +L GAD+KA+ AG++A++
Sbjct: 368 FDFRQLAKQTPGYVGADLKALTAAAGIIAIK 398
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 163 bits (397), Expect = 2e-41
Identities = 86/219 (39%), Positives = 129/219 (58%), Gaps = 6/219 (2%)
Frame = -3
Query: 763 KFKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA-----TFLRV 599
+ KE V LP +PE ++ ++PP+GV+ +GPPGTGKTL+A+A+A S+ +F
Sbjct: 277 QLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSSENKKVSFYMR 336
Query: 598 VGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTML 419
G++ + K++G+ + +R LF A+ PSI+F DEID + R I T+L
Sbjct: 337 KGADCLSKWVGEAERQLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLL 396
Query: 418 ELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTS 239
L+ DG +SRG V +I ATNR + +DPAL RPGR DR+ FPLPD +++I IHT
Sbjct: 397 ALM---DGMESRGQVIIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKIIEIHTR 453
Query: 238 RMTLADDVNLSELIMSKD-DLSGADIKAICTEAGLMALR 125
L ++ K GAD++A+CTEA L +++
Sbjct: 454 NWDPPVPEWLCSMLAEKSKGYGGADLRALCTEAALNSIK 492
Score = 35.1 bits (77), Expect = 0.012
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = -3
Query: 724 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLV 548
E +E + I P+ +I G G G+T L A+ Q ++ S L+Q +
Sbjct: 593 ETFETLRIYKPRFLIC-GRKGLGQTALGPAILQQYEGVHVQSFDMSTLLQDSTQSIETSI 651
Query: 547 RELFRVAEEHAPSIVFIDEID 485
LF H PSI++I +ID
Sbjct: 652 IHLFLEVRRHTPSIIYIPDID 672
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 163 bits (397), Expect = 2e-41
Identities = 93/220 (42%), Positives = 129/220 (58%), Gaps = 7/220 (3%)
Frame = -3
Query: 763 KFKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA------NQTSATFLR 602
+ KE V LP +PE + + I PP+GV+ +GPPGTGKTL+A+ +A NQ + FLR
Sbjct: 383 QLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLR 442
Query: 601 VVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 422
GS+ + K++G+ + +R LF A PSI+F DEID + R I T+
Sbjct: 443 K-GSDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVSTL 501
Query: 421 LELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHT 242
L L+ DG D+RG V VI ATNR LDPAL RPGR DR+ FPLP+++ + +I I++
Sbjct: 502 LALM---DGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINS 558
Query: 241 SRMT-LADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 125
+ + L L S GAD+KA+CTEA L A+R
Sbjct: 559 LHFSPKIPESYLLHLAESTSGYGGADLKALCTEAALNAVR 598
Score = 30.7 bits (66), Expect = 0.25
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -3
Query: 664 GTGKTLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 488
G G T L+K + + ++ + SEL+ L+ ++F A ++APSI+FI+ +
Sbjct: 716 GYGCTYLSKVLFSMLDGIHVQSLDISELLMDTTTSPRSLLTKIFSEARKNAPSIIFINNV 775
Query: 487 D 485
+
Sbjct: 776 E 776
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 155 bits (376), Expect = 7e-39
Identities = 81/221 (36%), Positives = 136/221 (61%), Gaps = 4/221 (1%)
Frame = -3
Query: 757 KESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQ 578
+++++LP PE + + G+KP GV+LYGPPGTGKTLLAKAVA + S F+ + G EL+
Sbjct: 668 RDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLN 726
Query: 577 KYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLD 398
Y+G+ VR +F A +P ++F DE+D++ R +S+ G + R + +LL +LD
Sbjct: 727 MYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSG-NVMDRVVSQLLAELD 785
Query: 397 GF--DSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL-PDEKTKRRIFTIHTSRMTL 227
D+ V VI ATNR + LDP+L+RPGR D+ + + E++K + T L
Sbjct: 786 SISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKL 845
Query: 226 ADDVNLSELIMS-KDDLSGADIKAICTEAGLMALRERRMKV 107
+ ++L+E+ + + +GAD+ A+C++A L A++ + ++
Sbjct: 846 DETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEI 886
Score = 33.5 bits (73), Expect = 0.036
Identities = 37/179 (20%), Positives = 81/179 (45%), Gaps = 3/179 (1%)
Frame = -3
Query: 682 ILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP-SI 506
+L+G P TGKT + VA+ SA + E D + ++F +P +I
Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADA-TADHLEAKLDMFVQNVVKSPCAI 484
Query: 505 VFIDEIDAVGTKRYDSN-SGGEREIQRTMLELLNQLDGFDS-RGDVKVIMATNRIETLDP 332
+F+ ++D + + N G + IQ LL+++D S +G VI + IE +
Sbjct: 485 IFVKDLDVLSISSDEGNIVPGSKSIQ----ILLSKIDLVKSPQGRYIVIGTCHSIEKIPY 540
Query: 331 ALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAI 155
++ + K DE+ + + I+ + + + ++L ++ + + +S +++ +
Sbjct: 541 EILSESFFELKFSELEMDERLE--LLKIYANNVIIDKRISLKDVALKTNSMSFGELECL 597
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 143 bits (346), Expect = 3e-35
Identities = 82/212 (38%), Positives = 125/212 (58%), Gaps = 1/212 (0%)
Frame = -3
Query: 757 KESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQ 578
KE+V LP P+ + G KP G++LYGPPGTGK+ LAKAVA + +TF + S+L+
Sbjct: 142 KETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVS 200
Query: 577 KYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLD 398
K++G+ +LVR+LF +A E PSI+FIDEID++ R + S R I+ L +N +
Sbjct: 201 KWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEGESESSRRIKTEFLVQMNGV- 259
Query: 397 GFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRM-TLAD 221
G D G V V+ ATN TLD A+ R R +++I PLP+ + R+F ++ ++ +
Sbjct: 260 GKDESG-VLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELT 316
Query: 220 DVNLSELIMSKDDLSGADIKAICTEAGLMALR 125
+ EL D SG+DI + +A + +R
Sbjct: 317 SQDFKELAKMTDGYSGSDISIVVRDAIMEPVR 348
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 140 bits (339), Expect = 2e-34
Identities = 85/221 (38%), Positives = 128/221 (57%), Gaps = 14/221 (6%)
Frame = -3
Query: 727 PEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV-GSELIQKYLGDGPKL 551
P E++GI KG++LYGPPGTGKTL+A+ + +A ++V G E++ KY+G +
Sbjct: 293 PGMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEEN 352
Query: 550 VRELFRVAE--------EHAPSIVFIDEIDAVGTKRYDSNSGGEREI-QRTMLELLNQLD 398
VR+LF AE E I+ DE+DA+ KR +SGG+ + + + +LL ++D
Sbjct: 353 VRKLFADAEREYRDRGEESGLHIIIFDELDAICKKR--GSSGGDTGVGDQVVNQLLAKMD 410
Query: 397 GFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMT---- 230
G D ++ VI TNR + +D AL+RPGR++ +E LPDE + +I IHTSRM
Sbjct: 411 GVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGI 470
Query: 229 LADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKV 107
L +DV++ EL + SGA+I + A A R +KV
Sbjct: 471 LENDVDMEELASLTKNFSGAEIAGLIKSASSFAF-YRHIKV 510
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 134 bits (324), Expect = 1e-32
Identities = 68/218 (31%), Positives = 125/218 (57%)
Frame = -3
Query: 757 KESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQ 578
++ +E P + Y++ ++ P G++L+G PG GKT LA A+++ F+ + G EL+
Sbjct: 619 RDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFPVQFISIKGPELLD 678
Query: 577 KYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLD 398
KY+G + VR+LF A+ P ++F DE D+V +R ++G R + ++L Q+D
Sbjct: 679 KYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQDSTG---VTDRVVNQILTQMD 735
Query: 397 GFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADD 218
G +S V ++ AT R + +DPAL+RPGR+D+ I LP+E+ + + +R + +
Sbjct: 736 GAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENA 795
Query: 217 VNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVT 104
L +L D + AD+ ++ +A L+A+ + +V+
Sbjct: 796 AMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLKRVS 833
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 126 bits (305), Expect = 3e-30
Identities = 82/223 (36%), Positives = 124/223 (55%), Gaps = 12/223 (5%)
Frame = -3
Query: 757 KESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQ 578
KE+V P PE ++ + +P +G++L+GPPGTGKT+LA+AVA + ATF + S L
Sbjct: 392 KEAVIYPFLRPELFQGLR-EPVQGMLLFGPPGTGKTMLARAVATEAKATFFSISASSLTS 450
Query: 577 KYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM-LELLNQL 401
KYLGD KLVR LF VA+ S++F+DEID++ + R D SG E E R + E L Q
Sbjct: 451 KYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSILSARND--SGNEHESSRRLKTEFLIQW 508
Query: 400 DGFDSRGD---------VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFT- 251
+ V V+ ATN +D A R R ++ PLP+++T+ + +
Sbjct: 509 SSLTNAAPDKQTGHSPRVLVLAATNLPWCIDEAARR--RFVKRTYIPLPEKETRYKHLSH 566
Query: 250 -IHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 125
+H L ++ +L EL+ + SG+DI A+ +A + LR
Sbjct: 567 LLHNQVHCLTEE-DLEELVNLTEGYSGSDITALAKDAAMGPLR 608
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 126 bits (303), Expect = 5e-30
Identities = 74/213 (34%), Positives = 121/213 (56%), Gaps = 2/213 (0%)
Frame = -3
Query: 754 ESVELPXTHPEYYEEMG--IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 581
+ V P +PE ++ G + PKG++LYGPPG GKT+LAKA+A Q+ ATF+ V L
Sbjct: 103 QDVLFPLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKALAKQSQATFINVSVGLLT 162
Query: 580 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQL 401
K+ G+ KLV LF +A + P+I+FIDEID +R ++ +I+ + + + L
Sbjct: 163 DKWFGESNKLVDALFTLARKLEPTIIFIDEIDTFLRQRQRTDHEAMAQIKAEFMSMWDGL 222
Query: 400 DGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAD 221
SR V V+ ATNR +D A+ R R+ + PLP+ + +R+I ++ ++ L
Sbjct: 223 LSGQSR--VLVLGATNRPADIDEAIRR--RMPKVFSIPLPNAEQRRKILELYLKKVPLEA 278
Query: 220 DVNLSELIMSKDDLSGADIKAICTEAGLMALRE 122
+ + + ++ + LSG+ IK +C A + RE
Sbjct: 279 NFDWNGVVNATAGLSGSYIKEVCRSALSVPRRE 311
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 117 bits (281), Expect = 2e-27
Identities = 79/225 (35%), Positives = 125/225 (55%), Gaps = 14/225 (6%)
Frame = -3
Query: 757 KESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQ 578
KE+V P P+ ++ + +P +G++L+GPPGTGKT+LA+AVA ++ + F + S L
Sbjct: 472 KEAVVYPFLRPDLFQGLR-EPARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTS 530
Query: 577 KYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM-LELLNQL 401
K+LG+ KLVR LF +A++ +PSI+F+DEID++ + R S+ G E E R + E L Q
Sbjct: 531 KFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSAR--SSDGNEHETSRRIKTEFLIQW 588
Query: 400 DGF----DSRGD-----VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKR----R 260
SR V V+ ATN +D A R R R+ PLPDE T+R
Sbjct: 589 SSLARAAASRQTADHPRVLVLAATNLPWCIDDAARR--RFVRRTYIPLPDETTRRLHLNN 646
Query: 259 IFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 125
+ ++L D + ++ + + SG+D+ A+ +A + LR
Sbjct: 647 LLKYQKHSLSLED---IEAIVKATEYYSGSDLTALAKDAAMGPLR 688
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 77.8 bits (183), Expect = 2e-15
Identities = 59/181 (32%), Positives = 90/181 (49%), Gaps = 1/181 (0%)
Frame = -3
Query: 724 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 545
++Y+ GI +G +LYGPPG+GKT A+A + + L +K L D +L
Sbjct: 232 QWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVL---NLAEKGLTDD-RLNH 287
Query: 544 ELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 365
L V + ++V ++++D+ R S G T LLN LDG S + +
Sbjct: 288 LLSNVPPK---AVVLLEDVDSAFQGRERSGEVGFHA-NVTFSGLLNALDGVTSSDERIIF 343
Query: 364 MATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFT-IHTSRMTLADDVNLSELIMSK 188
M TN E LDPAL+RPGR+D K + R +FT + +ADD LS+++ K
Sbjct: 344 MTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREMFTRFYGHSPEMADD--LSDIVCPK 401
Query: 187 D 185
+
Sbjct: 402 N 402
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 41.5 bits (93), Expect = 1e-04
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Frame = -3
Query: 706 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRV-VG-----SEL---IQKYLGDGP- 557
G K + L GPPG GKT + K++A+ + F R VG +E+ + Y+G P
Sbjct: 567 GTMQGKIMCLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTYIGAMPG 626
Query: 556 KLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREI---QRTMLELLNQLDGFDS 386
K+V+ L +V E+ ++ IDEID VG + E+ ++ L +D
Sbjct: 627 KIVQALKKVQTEN--PLILIDEIDKVGKSHQGDPASALLELLDSEQNSAFLDYYMDIPLD 684
Query: 385 RGDVKVIMATNRIETLDPALI 323
V + N I+T+ P L+
Sbjct: 685 VSSVLFVCTANTIDTIPPPLL 705
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 33.1 bits (72), Expect = 0.047
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -3
Query: 691 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 584
KGV+ G GTGKT LA A+A + F +VGSE+
Sbjct: 65 KGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEV 102
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 31.9 bits (69), Expect = 0.11
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -3
Query: 700 KPPKGVILYGPPGTGKTLLAKAVAN---QTSATFLRVVGSELIQKY 572
+P + GP GTGKTLL KA+A+ +R+ SE ++K+
Sbjct: 612 QPIASFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKH 657
Score = 31.5 bits (68), Expect = 0.14
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Frame = -3
Query: 682 ILYGPPGTGKTLLAKAV----------ANQTSATFLRV-VGSELI-QKYLGDGPKLVREL 539
+L G PG GKT +A+ + AN ++ L + VGS + K+ G+ + ++ +
Sbjct: 206 VLIGEPGVGKTSIAEGLARRIIDDDVPANLSNCKLLSLDVGSLVAGSKFRGEFEERIKSV 265
Query: 538 FR-VAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 362
+ V E P I+F+DE+ + + SGGE ++ N L +RG + I
Sbjct: 266 LKEVEESETPIILFVDEMHLL----MGAGSGGEGG-----MDAANLLKPMLARGKLHCIG 316
Query: 361 ATNRIE 344
AT E
Sbjct: 317 ATTLAE 322
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 31.9 bits (69), Expect = 0.11
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 685 VILYGPPGTGKTLLAKAVANQTSATFLRV 599
+IL+G GTGKT LA+ +A T + F+ +
Sbjct: 123 MILWGSAGTGKTTLARLIAVTTKSRFIEI 151
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 31.5 bits (68), Expect = 0.14
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -3
Query: 691 KGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGD 563
K V+L GPPG GKT A VA L + S+ K L D
Sbjct: 410 KAVLLSGPPGIGKTTAAHLVAKLEGYDVLELNASDTRSKRLLD 452
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 31.5 bits (68), Expect = 0.14
Identities = 39/175 (22%), Positives = 73/175 (41%), Gaps = 3/175 (1%)
Frame = -3
Query: 685 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGD--GPKLVRELFRVAEEHAP 512
++ YGPPGTGKT A A + R ++L++ D G VRE ++ +
Sbjct: 59 MLFYGPPGTGKTSTILACARKIYGPNYR---NQLMELNASDDRGIDAVRE--QIKNFAST 113
Query: 511 SIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 332
+F + D+ + + R ++E + +V+ + N I + P
Sbjct: 114 RQIFASTFKMIILDEADAMTLAAQNALRRVIEKYTK--------NVRFCIICNYINKISP 165
Query: 331 ALIRPGRIDRKIEFPLPDEKTKRRI-FTIHTSRMTLADDVNLSELIMSKDDLSGA 170
A+ R R PLP ++ ++ + I + + D ++ L +SK D+ A
Sbjct: 166 AI--QSRCTRFRFQPLPPKEIEKTVDHVIQSEHCNIDPDAKMAVLRLSKGDMRKA 218
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 31.1 bits (67), Expect = 0.19
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -3
Query: 685 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL--IQKYLG 566
+++ GP +GKT + + VA +T F+R+ E +Q+Y+G
Sbjct: 897 ILIQGPTSSGKTSMIEYVAKKTGHKFVRINNHEHTDLQEYIG 938
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 691 KGVILYGPPGTGKTLLAKAVANQTSATFLRV 599
K ++L G PG GKT L A+A +T +R+
Sbjct: 1560 KPILLEGSPGVGKTSLITALARETGHQLVRI 1590
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 31.1 bits (67), Expect = 0.19
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -3
Query: 697 PPKGVILYGPPGTGKTLLAKAVANQTSA-TFLRVVG 593
PP V + GPPGTGK+ L K++ + S T ++ G
Sbjct: 73 PPVIVAVMGPPGTGKSTLIKSLVRRYSKYTISQITG 108
>SPCC1442.07c |||ubiquitin/metalloprotease fusion
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 282
Score = 30.7 bits (66), Expect = 0.25
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -3
Query: 535 RVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 356
++ + H ++ + E+D R+DS + G Q +EL + D +D D K + +T
Sbjct: 140 KIMDSHRWTVPLLSEMDPAEHTRHDSKTLGLNHNQGAHIELRLRTDRYDGFRDYKTVKST 199
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 30.3 bits (65), Expect = 0.33
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -3
Query: 685 VILYGPPGTGKTLLAKAVANQT 620
+I+ G PGTGKT LA+ VA T
Sbjct: 11 IIICGTPGTGKTTLAEQVAETT 32
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 29.1 bits (62), Expect = 0.77
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = -3
Query: 691 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEH 518
+ +++ GPP TGKT +A +A + F+ + SE+ + L++ L +
Sbjct: 66 RAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEALLQALRKSIGVR 125
Query: 517 APSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 422
I E + V + S +GG ++ + T+
Sbjct: 126 IKEETEIIEGEVVEVQIDRSITGGNKQGKLTI 157
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 28.7 bits (61), Expect = 1.0
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 672 VLRALVKHSWPRLLQTR-HLLPSYVLLDLNLYKNIWVMVPSWFVNCSVLLRNMHLQL 505
++ + +KH+ L LLPS VL D YK++ +V W L++ H Q+
Sbjct: 219 LILSTIKHAEENNLDLSVRLLPSKVLSDSEFYKSLSNLVNVWLKTTRSLIKLFHDQI 275
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 540 CSVLLRNMHLQLFSLMKLMQWALNVM 463
C++L RN+HL+ FS LNV+
Sbjct: 4084 CNILYRNVHLEEFSWGTFKDLLLNVV 4109
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.3 bits (60), Expect = 1.4
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 327 SAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*ISLSPPEFE-S*RLVPTASISSMK 503
++ S VS++ + + +SP+ S + + S L S++P + L+P++S
Sbjct: 546 TSNSSVSLQTSSSLIISSPIISSSLTATSTSTPALTHSITPSNTSYTSSLIPSSSTDYSS 605
Query: 504 TIEGACSSATRNSSRTNL 557
++ CS+ T S T+L
Sbjct: 606 SLITVCSNVTSEISSTSL 623
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 685 VILYGPPGTGKT-LLAKAVANQTSATFLRVVGSELIQKYLGDG 560
++L GP GTGK+ LL + V NQ VG + + + G
Sbjct: 12 IVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVG 54
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = -3
Query: 700 KPPKGVILYGPPGTGKTLLAKAVAN---QTSATFLRVVGSELIQKY 572
+P + GP G GKT L KA+A T +R SE +K+
Sbjct: 530 RPLASFLFLGPTGVGKTALTKALAEFLFDTDKAMIRFDMSEFQEKH 575
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 682 ILYGPPGTGKTLLAKAVANQTSATFL 605
++ GP G+GKT +AKAV+ + ++
Sbjct: 18 VVIGPAGSGKTTMAKAVSEKLGFEYI 43
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -3
Query: 694 PKGVILYGPPGTGKTLL 644
PKG+ LYG G GKT L
Sbjct: 118 PKGIYLYGDVGCGKTAL 134
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = -1
Query: 732 HIRNTMKKWESNLPKESSCTVLRALVKHSWPRLLQTRHLLPSYVLLDLNLY 580
HI N ++W S +++ L + W + + P Y+ DL LY
Sbjct: 152 HIANWPQQWASYHATKAAVKHLARALAVEWAPFARVNSVSPGYIDTDLTLY 202
>SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 27.1 bits (57), Expect = 3.1
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = -3
Query: 589 ELIQKYLG---DGPKLVRELFRVAEEHA---PSIVFIDEIDAVGTKRYDSNSGGEREIQR 428
E I KY G +GP ++R+ A++ P V +D +GTK +D + E+E
Sbjct: 228 EYINKYRGRYSEGPDVLRKNRLQAQKDLGLIPENVIPAPVDGMGTKSWDELTTEEKEFSA 287
Query: 427 TMLEL 413
+E+
Sbjct: 288 RTMEV 292
>SPBC216.06c |swi1||replication fork protection complex subunit
Swi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 971
Score = 26.6 bits (56), Expect = 4.1
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -3
Query: 274 KTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNED 95
KT I HT+R + + ++ I+ DD S DI +EA ALRE+ + +
Sbjct: 890 KTNETIID-HTTRKKKENHLRSAKYIVDSDDDSETDIAFFQSEA---ALREKNAQKASAL 945
Query: 94 FKK 86
FK+
Sbjct: 946 FKR 948
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 26.6 bits (56), Expect = 4.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 617 RCLVCNSLGQECFTSARRTVQDDSFG 694
+CL C +LG+ ++ QD S+G
Sbjct: 64 KCLACENLGKVMINHSKELPQDSSYG 89
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 86 FLEVLICYFHTALSKCHETSFSTYCLNISTRKIIF*HNKFRQV 214
FL + +H + KC ETS +C+ + R HN+ R++
Sbjct: 268 FLHIFELRYHIMIKKCLETS-KRFCIAMPLRARSDGHNEHREL 309
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 26.2 bits (55), Expect = 5.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 726 RNTMKKWESNLPKESSCTVLRALVKHSWPRLLQTRH 619
+NT+ E+N P S+ + +L+ S P L T H
Sbjct: 505 KNTILSNENNTPNYSNVCLSTSLINRSLPSLKSTMH 540
>SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 486 SISSMKTIEGACSSATRNSSRTNLGPSPKYFCISS 590
S S++ + + S + N+ R+ +GP +FC+S+
Sbjct: 319 SHSALNNLHKSESGTSLNNRRSKVGPGSCFFCLSN 353
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 5.5
Identities = 34/159 (21%), Positives = 67/159 (42%), Gaps = 3/159 (1%)
Frame = +3
Query: 87 FLKSSFVTFIRRSLSAMRPASVHIALISAPERSSFDIISSDKFTSSANVILDV*MVKILL 266
FL SS ++ S S++ P S+ I S P S +SS + S N+
Sbjct: 228 FLPSSVISSASLSSSSVLPTSI-ITSTSTPVTVSSSSLSSFTPSYSTNLTTTGSTTTTGS 286
Query: 267 LVFSSG---KGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*I 437
SS +S+ + P +S+ + S + +T ++ + + ++
Sbjct: 287 ATVSSSPFYSNSSVIPTSVPSSVSSFTSSSSSYTTTLTASNTSVTYTGTGTGSATF---- 342
Query: 438 SLSPPEFES*RLVPTASISSMKTIEGACSSATRNSSRTN 554
+ SPP + + ++PT+ SS+ + + SS T + +N
Sbjct: 343 TSSPPFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLTASN 381
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 26.2 bits (55), Expect = 5.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -3
Query: 682 ILYGPPGTGKTLLAKAV 632
++ GPPGTGKT+ + +V
Sbjct: 411 LIQGPPGTGKTVTSASV 427
>SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 226 LMSFLMYEW*KSFSWFSRQARG 291
L+SFL+Y+ K+F W Q G
Sbjct: 172 LLSFLVYKMNKAFGWIMYQQHG 193
>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 660
Score = 25.4 bits (53), Expect = 9.5
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = -3
Query: 682 ILYGPPGTGKT 650
+++GPPGTGKT
Sbjct: 229 LIHGPPGTGKT 239
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 25.4 bits (53), Expect = 9.5
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = -3
Query: 271 TKRRI-FTIHTSRMTLA-DDV-NLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTN 101
+K+R+ F++ T + A DDV ++ + +D L A I+ TEA ERR +
Sbjct: 883 SKKRVDFSLGTRHLMPAFDDVADIGSKRLGRDSLPDAVIENAGTEAMRREAEERR-RAEE 941
Query: 100 EDFKKSKE 77
E++++S++
Sbjct: 942 EEYERSQQ 949
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -3
Query: 475 TKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIET 341
+K+Y NS + M +L FD D K TNR ET
Sbjct: 574 SKKYQDNSVNNTYFDKVMQHVLVHSPAFDDSSDPK--FETNRSET 616
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,531,555
Number of Sequences: 5004
Number of extensions: 77857
Number of successful extensions: 334
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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