Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_E11
(376 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 24 0.51
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 1.6
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 22 2.7
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 2.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 3.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 3.6
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 4.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 6.3
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 6.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 6.3
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 6.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 8.3
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 24.2 bits (50), Expect = 0.51
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 6 WKFLG*MTGIWDGMRYFFPYSFILDLCVLKQD 101
W F +W + F + IL+LCV+ D
Sbjct: 112 WLFTTDWCDVWRSLDVLFSTASILNLCVISLD 143
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.6 bits (46), Expect = 1.6
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = -3
Query: 329 TKFVLNYFQNVFPIVFPVIHNSWYKQCGSI 240
T +LNY + ++ +++ +WY G I
Sbjct: 791 THMILNYVGSEDSVIPRILYLTWYSSNGDI 820
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 21.8 bits (44), Expect = 2.7
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 139 PFAVRNYPNRLKFLQRLYRHLK 204
PF +NYP + + R Y+ +K
Sbjct: 81 PFMQQNYPYEWQLILRRYKIMK 102
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.8 bits (44), Expect = 2.7
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = +3
Query: 48 RYFFPYSFIL 77
R+FFP+SF++
Sbjct: 364 RFFFPFSFLI 373
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 3.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 88 THKSRINEYGKKYL 47
TH +R+N YG Y+
Sbjct: 509 THAARLNVYGLPYI 522
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 3.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 88 THKSRINEYGKKYL 47
TH +R+N YG Y+
Sbjct: 509 THAARLNVYGLPYI 522
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.0 bits (42), Expect = 4.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 173 FSLFG*LRTAKGEKRVYIGSSKLAI 99
FSL T+KGE R+ G K AI
Sbjct: 395 FSLLRDAFTSKGEYRMSTGEMKEAI 419
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 20.6 bits (41), Expect = 6.3
Identities = 8/20 (40%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 33 IWDGMRYFFPYSFILD-LCV 89
+WDG+ F Y+ +L+ +CV
Sbjct: 365 VWDGVCMCFIYASLLEFVCV 384
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 20.6 bits (41), Expect = 6.3
Identities = 8/20 (40%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 33 IWDGMRYFFPYSFILD-LCV 89
+WDG+ F Y+ +L+ +CV
Sbjct: 334 VWDGVCMCFIYASLLEFVCV 353
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.6 bits (41), Expect = 6.3
Identities = 8/20 (40%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 33 IWDGMRYFFPYSFILD-LCV 89
+WDG+ F Y+ +L+ +CV
Sbjct: 385 VWDGVCMCFIYASLLEFVCV 404
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 20.6 bits (41), Expect = 6.3
Identities = 8/20 (40%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 33 IWDGMRYFFPYSFILD-LCV 89
+WDG+ F Y+ +L+ +CV
Sbjct: 334 VWDGVCMCFIYASLLEFVCV 353
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.2 bits (40), Expect = 8.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 315 KLLSKCISNCVSCYS 271
+LLS C+SN C S
Sbjct: 916 ELLSSCVSNDGGCSS 930
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,217
Number of Sequences: 438
Number of extensions: 2252
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9052365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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