Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_E09
(749 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 179 3e-46
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 160 2e-40
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 157 2e-39
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 135 5e-33
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 128 6e-31
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 110 2e-25
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 100 3e-22
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 70 3e-13
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 48 2e-06
SPBC83.06c |||mitochondrial ribosomal protein subunit L36|Schizo... 28 1.6
SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|... 27 2.2
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 27 2.2
SPAPB8E5.03 |mae1||malic acid transport protein Mae1 |Schizosacc... 27 2.9
SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces... 27 3.8
SPAPB24D3.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 6.6
SPBC1604.05 |pgi1||glucose-6-phosphate isomerase |Schizosaccharo... 26 6.6
SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase Met9|... 25 8.7
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 8.7
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 179 bits (436), Expect = 3e-46
Identities = 82/112 (73%), Positives = 89/112 (79%)
Frame = -3
Query: 435 SSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGS 256
S+FHR+IP FM QGGDFT NGTGGKSIYG F DENF LKH PG+LSMANAGPNTNGS
Sbjct: 49 STFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGS 108
Query: 255 QFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKSGKPIKKVVISDSG 100
QFFITTV TPWLD KHVVFG V EGMDVV+K+E LGS SG ++VI G
Sbjct: 109 QFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCG 160
Score = 71.7 bits (168), Expect = 1e-13
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -2
Query: 568 YFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGXQG 437
+FDV A+G+PLGRIV KL D VPKTA NFRALCTGEKG+G G
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAG 48
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 160 bits (388), Expect = 2e-40
Identities = 73/112 (65%), Positives = 86/112 (76%)
Frame = -3
Query: 435 SSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGS 256
S FHR+I +FM QGGDFT NGTGG+SIYG F DENF+LKH P +LSMANAGPNTNGS
Sbjct: 54 SRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGS 113
Query: 255 QFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKSGKPIKKVVISDSG 100
QFFITTVPTP LD KHVVFG V++G V+ +E L +K+ P+ VVI + G
Sbjct: 114 QFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165
Score = 35.9 bits (79), Expect = 0.006
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -2
Query: 568 YFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGXQGFIIS*NNTRLH 404
YF ++ DG+ I +L + VPKT +NF +LC GF G ++ +R H
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLC---NGFEKDGRCLTYKGSRFH 57
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 157 bits (381), Expect = 2e-39
Identities = 73/115 (63%), Positives = 88/115 (76%), Gaps = 1/115 (0%)
Frame = -3
Query: 435 SSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGS 256
S FHR+IP+FM QGGD T +GTGGKSIYG F DENFKL H PG+LSMANAGP++NGS
Sbjct: 74 SIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGS 133
Query: 255 QFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKS-GKPIKKVVISDSGEL 94
QFFITTV TPWLD HVVFG V+ G D+V+K+ K + + KP++ V I SG+L
Sbjct: 134 QFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKIIKSGQL 188
Score = 60.9 bits (141), Expect = 2e-10
Identities = 30/47 (63%), Positives = 33/47 (70%)
Frame = -2
Query: 571 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGXQGFI 431
VYFD+ E LGR+ I L VPKTAENFRAL TGEKGFG +G I
Sbjct: 29 VYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSI 75
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 135 bits (327), Expect = 5e-33
Identities = 67/117 (57%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
Frame = -3
Query: 435 SSFHRIIPDFMCQGGDFTNHNGTGGKSIYG-RTFSDENFKLKHTGPGILSMANAGPNTNG 259
S+FHRII FM QGGDF + +GTG +I+ RTF DENF LKH PG+LSMANAG ++NG
Sbjct: 58 STFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNG 117
Query: 258 SQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEK--LGSKSGKPIKKVVISDSGEL 94
QFFITTVP +LD KHVVFG V+EG D+V+++E +G+ S +P V I + GE+
Sbjct: 118 CQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANS-RPKSNVAIVECGEM 173
Score = 52.4 bits (120), Expect = 7e-08
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = -2
Query: 592 STQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGE 458
ST+P V+ D+ DG LGRI I+L + VPKTAENFR CTGE
Sbjct: 2 STEP--VVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGE 44
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 128 bits (310), Expect = 6e-31
Identities = 64/108 (59%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
Frame = -3
Query: 429 FHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQ 253
FHR+IPDF+ QGGD T G GG SIYG F DE + L HTG GILSMANAGPNTN SQ
Sbjct: 43 FHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQ 101
Query: 252 FFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGS-KSGKPIKKVVI 112
FFIT PTPWLD KH +FG VV G+ V ++M + + S +PI+ + I
Sbjct: 102 FFITLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTDSSDRPIEPLKI 149
Score = 29.9 bits (64), Expect = 0.40
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2
Query: 538 LGRIVIKLNTDEVPKTAENFRAL 470
LG+I+I+L T+ PKT +NF L
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTL 32
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 110 bits (265), Expect = 2e-25
Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Frame = -3
Query: 429 FHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQ 253
FHRII +FM QGGD +GTGG+SI+ + F DE + LKH P +SMAN+GPNTNGSQ
Sbjct: 496 FHRIIKNFMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQ 554
Query: 252 FFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEK 154
FFITT TPWLD KH +F G+DVV ++E+
Sbjct: 555 FFITTDLTPWLDGKHTIFARAYAGLDVVHRIEQ 587
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 100 bits (239), Expect = 3e-22
Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = -3
Query: 429 FHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFK-LKHTGPGILSMANAGPNTNGSQ 253
FHR I FM QGGD + G GG+SI+G+ F DE LKH GI+SMAN G NTNGSQ
Sbjct: 317 FHRNIARFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQ 375
Query: 252 FFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKS 139
FFI P LD KH +FG VV G++V+ +EK+ + S
Sbjct: 376 FFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNS 413
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 70.1 bits (164), Expect = 3e-13
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = -3
Query: 426 HRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENF-KLKHTGPGILSMANAGPNTNGSQF 250
HR++P+F+ QGGD T G GG+SIYG F+ E +L+ G++ MA N SQF
Sbjct: 55 HRVVPEFLIQGGDPTG-TGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQF 113
Query: 249 FITTVPTPWLDRKHVVFGSVV 187
FIT PTP + K +FG VV
Sbjct: 114 FITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 47.6 bits (108), Expect = 2e-06
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Frame = -3
Query: 429 FHRIIPDFMCQGGDFTNHNGTGGKSIYG------RTFSDE-NFKLKHTGPGILSMANAGP 271
F+ I ++ CQ GD G GG+ ++ R F E N L H G++SM+ A
Sbjct: 42 FYNIQHNYTCQTGDPLGPTGDGGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATI 101
Query: 270 NTN-------GSQFFITTVPT-PWLDRKHVVFGSVVEGMDVVQKM-EKLGSKSGKPIKKV 118
++ GSQF IT LD ++ ++G V EG D + K+ + + + G+P + +
Sbjct: 102 SSRDDKLLVCGSQFIITLSDNLEGLDERYPIYGQVAEGFDTLLKINDAICDEEGQPYRDI 161
Query: 117 VISDSGELD 91
I + LD
Sbjct: 162 RIKHTIILD 170
Score = 29.5 bits (63), Expect = 0.54
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 538 LGRIVIKLNTDEVPKTAENFRALC 467
+G +VI L E PKT ENF LC
Sbjct: 9 VGDLVIDLFVKEAPKTCENFLKLC 32
>SPBC83.06c |||mitochondrial ribosomal protein subunit
L36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 59
Score = 27.9 bits (59), Expect = 1.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 731 SKVHIVKYTGRIYLVCDENPNHDT 660
S + V+ GR+Y++C ++P H T
Sbjct: 33 SSCYFVRRKGRLYVLCKKHPRHKT 56
>SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 376
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 437 PLXPKTFFTSTQSSKV--LSSFRYFIRVQFYDYTSQWL 544
P P FF + +++ L S R F+ FYD+T+++L
Sbjct: 13 PTAPSQFFAGSSLNRLSFLRSNREFLNKAFYDHTTRFL 50
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 526 LYVPMALRQQLHRNKLVYQVESKQNEVLQQSI 621
LYV +A R+++ R++L Q++++ LQQ +
Sbjct: 434 LYVALAQRKEVRRSQLEAQIQARNQFRLQQQV 465
>SPAPB8E5.03 |mae1||malic acid transport protein Mae1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 174 HPYLQPQTQILHVFYPTKESELWL*KIETHLYS 272
HP +P T +L+ +P +++ L K++TH+ S
Sbjct: 391 HPPPKPNTGVLNPTFPPEKAPASLEKVDTHVTS 423
>SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 369
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 180 MDVVQKMEKLGSKSGKPIKK 121
M+ +QKM+ L +K G+P KK
Sbjct: 1 MEPIQKMDSLNNKEGQPDKK 20
>SPAPB24D3.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 300
Score = 25.8 bits (54), Expect = 6.6
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 113 MTTFFIGL-PLLEPSFSIFCTTSIPSTTDPNTTCFLSNQGVGTVVIK 250
+ TF G PL+EP+F+ + + PN T Q VG + +K
Sbjct: 248 VATFTSGYSPLVEPAFTFASALNTTLNSFPNGTLPTQTQVVGDIGVK 294
>SPBC1604.05 |pgi1||glucose-6-phosphate isomerase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 25.8 bits (54), Expect = 6.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 141 SGKPIKKVVISDSGELD*SCLVVNSGISKYVRKNYLDLMFV 19
+GKPIK +V G D ++V + Y ++N L+L FV
Sbjct: 150 TGKPIKSIVNVGIGGSDLGPVMVTEALKPYGQEN-LELHFV 189
>SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase
Met9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 603
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 491 SFRYFIRVQFYDYTSQWLSVSSYIEI-NLFIRLSRSK 598
+ RY +R+ + T+ W S SY EI +LF R K
Sbjct: 363 AIRYGLRMSPKEITTSWGSPKSYSEIGDLFARYCEKK 399
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.4 bits (53), Expect = 8.7
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +2
Query: 662 YHDWDFHHRLDICVQYISQCV 724
YH WD+H L I + + + +
Sbjct: 3017 YHSWDYHSMLQIANEVLQETI 3037
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,169,831
Number of Sequences: 5004
Number of extensions: 69144
Number of successful extensions: 217
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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