Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_E05
         (805 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1363 - 32898345-32898371,32898986-32899837,32900234-329005...    28   10.0 
01_06_1404 - 37062931-37063086,37064029-37064216,37064296-37064389     28   10.0 

>04_04_1363 -
           32898345-32898371,32898986-32899837,32900234-32900500,
           32900723-32901025,32902329-32902433,32903361-32903548,
           32903628-32903721
          Length = 611

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 469 IHFQRIKYIFDAFYRTQYLHNSIYE 543
           I  QR +YI+D +YR + +   +YE
Sbjct: 52  ISHQRSRYIYDLYYRRKEISKELYE 76


>01_06_1404 - 37062931-37063086,37064029-37064216,37064296-37064389
          Length = 145

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 469 IHFQRIKYIFDAFYRTQYLHNSIYE 543
           I  QR +YI+D +YR + +   +YE
Sbjct: 52  ISHQRSRYIYDLYYRRKEISKELYE 76


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,378,403
Number of Sequences: 37544
Number of extensions: 236925
Number of successful extensions: 334
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)