Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_E03
(569 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142... 211 3e-55
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212... 211 3e-55
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314... 211 3e-55
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 66 2e-11
11_01_0524 - 4115125-4115491,4116096-4116180,4116796-4116938,411... 30 1.5
06_01_0221 + 1690978-1692171,1692265-1692276 29 2.0
04_03_0958 - 21241230-21241327,21241693-21241893,21241989-212421... 29 2.0
03_05_0291 - 22837412-22838128 29 2.0
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041... 29 3.4
02_02_0500 - 10993675-10994067,10994434-10995738 29 3.4
08_02_1367 + 26432425-26432622,26434071-26434162,26434337-264344... 28 4.6
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281 28 4.6
06_03_0458 - 20995834-20996004,20996404-20997309,20997778-209979... 28 4.6
03_04_0243 + 19298293-19299117 28 4.6
06_03_0025 - 15577231-15577420,15577682-15577813,15578025-155781... 28 6.0
03_05_0989 + 29483281-29484612 28 6.0
11_06_0538 + 24759030-24759379,24759380-24759488,24759604-247596... 27 8.0
04_04_1074 + 30628192-30628456,30628924-30629144 27 8.0
04_04_0832 - 28507448-28507516,28507902-28507980,28508527-28509614 27 8.0
04_04_0162 - 23210732-23211739 27 8.0
>10_08_0319 -
16712572-16712654,16712756-16712797,16713955-16714239,
16714346-16714358
Length = 140
Score = 211 bits (515), Expect = 3e-55
Identities = 93/114 (81%), Positives = 108/114 (94%)
Frame = -1
Query: 470 LGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVM 291
LGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM++ATVKKGKP+LRKKVM
Sbjct: 18 LGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVM 77
Query: 290 PAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 129
PAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPR
Sbjct: 78 PAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPR 131
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -3
Query: 522 MSKRGRGGSAGAKFRISPGSP 460
MSKRGRGGSAG KFR+S G P
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLP 21
>03_01_0276 +
2124538-2124550,2124678-2124962,2126813-2126854,
2126943-2127025
Length = 140
Score = 211 bits (515), Expect = 3e-55
Identities = 93/114 (81%), Positives = 108/114 (94%)
Frame = -1
Query: 470 LGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVM 291
LGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM++ATVKKGKP+LRKKVM
Sbjct: 18 LGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVM 77
Query: 290 PAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 129
PAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPR
Sbjct: 78 PAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPR 131
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -3
Query: 522 MSKRGRGGSAGAKFRISPGSP 460
MSKRGRGGSAG KFR+S G P
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLP 21
>02_05_1201 +
34929577-34929589,34930252-34930587,34931378-34931419,
34931630-34931712
Length = 157
Score = 211 bits (515), Expect = 3e-55
Identities = 93/114 (81%), Positives = 108/114 (94%)
Frame = -1
Query: 470 LGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVM 291
LGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM++ATVKKGKP+LRKKVM
Sbjct: 35 LGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVM 94
Query: 290 PAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 129
PAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPR
Sbjct: 95 PAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPR 148
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3
Query: 510 GRGGSAGAKFRISPGSP 460
GRGGSAG KFR+S G P
Sbjct: 22 GRGGSAGNKFRMSLGLP 38
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Frame = -1
Query: 446 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK---VMPAVVI 276
+ DN+GAK V+ +Q ++G+ A GD I+ +VK+ +P + K V+ VV+
Sbjct: 58 LKVVDNSGAKR--VMCIQSLRGK----KGARLGDTIIGSVKEAQPRGKVKKGDVVYGVVV 111
Query: 275 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 150
R R DG I F+DNA V+VNNKGE+ G+ + GPV E
Sbjct: 112 RAAMKRGRNDGSEIQFDDNAIVLVNNKGELIGTRVFGPVPHE 153
>11_01_0524 -
4115125-4115491,4116096-4116180,4116796-4116938,
4117449-4117654,4118650-4118748,4118958-4118993,
4119222-4119276,4119505-4119690,4120572-4120759
Length = 454
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -3
Query: 519 SKRGRGGSAGAKFRISPGSPSGSS 448
S RGR GSAG K R PG G S
Sbjct: 5 SSRGRSGSAGLKRRRGPGGGGGGS 28
>06_01_0221 + 1690978-1692171,1692265-1692276
Length = 401
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 328 TVATIMSPEPAAGSLFRRPLIPWTAITYRFFAPVLSAQLITA-PTGRPRGDTE 483
++A + S P + + FRR L+P+ A F A S LI A P +GD E
Sbjct: 160 SLAVLSSSFPPSSAAFRRELLPYMAPLLAFLAKTGSPFLINAYPYFAYKGDPE 212
>04_03_0958 -
21241230-21241327,21241693-21241893,21241989-21242110,
21242462-21242536,21242626-21242714,21242808-21242888,
21243552-21243674
Length = 262
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/65 (27%), Positives = 22/65 (33%)
Frame = -3
Query: 513 RGRGGSAGAKFRISPGSPSGSSNQLRRQHRGKESVCDRCPRYQRSPEQTAGGRFRGHDCG 334
RGRG G + PG G + G + P Q GR RG CG
Sbjct: 186 RGRGRGRGRRGSFGPGRGYGGDGFAMEEAGGYDDGEPNAPPMQGHEGGRGRGRGRGRGCG 245
Query: 333 HSQKG 319
+ G
Sbjct: 246 RGRGG 250
>03_05_0291 - 22837412-22838128
Length = 238
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 115 AFEAIRGHRSAHSLATGPVMAEPFI--SPLLLTMTPALSS 228
+++A+ GH+++H T P MA + P T +PA SS
Sbjct: 100 SYQALGGHKTSHRPRTPPTMAAVVVVDEPAATTASPAASS 139
>03_06_0296 +
32901696-32901892,32901989-32902232,32903992-32904112,
32904219-32904406
Length = 249
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 210 DTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEFRFTLFDCGHNHV 347
+ I+++ Y+ T +R P P D + +F F L+DC +N V
Sbjct: 101 EINIIIEAYR---TLRDRGPYPADQVVRDINGKFAFVLYDCSNNSV 143
>02_02_0500 - 10993675-10994067,10994434-10995738
Length = 565
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +1
Query: 166 PVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTT---AGITFFR-SSGLPFLTV 333
P EP I+ + ++PA+ +T S + NG+ +M+T G+ F + SSG + V
Sbjct: 225 PAPVEPIIANGKVKLSPAVMEMIYSTISGIENGYLPVMSTEGSGGVYFMKDSSGESNVAV 284
Query: 334 ATIMSPEPAA 363
+ EP A
Sbjct: 285 FKPIDEEPMA 294
>08_02_1367 +
26432425-26432622,26434071-26434162,26434337-26434403,
26434519-26434638,26434792-26435023,26435525-26435606,
26435985-26436117,26436332-26436537,26436633-26436758,
26437208-26437907
Length = 651
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 309 FRFTLFDCGHNHVPGTGRRQSVQATFDTLDSDHIQILCPCVVGAVDYCSHW 461
FRF + D H+ GT + + ++ T+D H L + Y S+W
Sbjct: 455 FRFCIADSEHDWREGTDQYKFIEQCLSTVDRKHQPWLIFAAHRVLGYSSNW 505
>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
Length = 518
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = -3
Query: 513 RGRGGSA--GAKFRISPGSPSGSSNQLRRQHRGKESVCDRCPRYQRSPEQTAGGRFRGHD 340
RG GGS+ G+ + G+ SG + G C C RS GG + G +
Sbjct: 177 RGHGGSSSIGSGSGVGLGATSGVG---AGSNVGPSGGCSTCGSGSRSGSGAGGGSYSGSN 233
Query: 339 CGHSQKG*T*TPEKGNAGSG 280
G S + + GSG
Sbjct: 234 SGSSSSSGSGSNSNSIGGSG 253
>06_03_0458 -
20995834-20996004,20996404-20997309,20997778-20997942,
20998024-20998353,20998471-20998527,20998579-20998692,
20999220-20999381,20999465-20999527,21001100-21001207,
21001598-21001675,21001771-21001902
Length = 761
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -1
Query: 227 EDNAGVIV--NNKGEMKGSAITGPVAKECAD 141
ED +I+ N+KG +GS ITG + + CA+
Sbjct: 715 EDGDKIIMSSNDKGSNQGSFITGKIVESCAE 745
>03_04_0243 + 19298293-19299117
Length = 274
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 516 KRGRGGSAGA-KFRISPGSPSGSSNQLRRQHRGKESVCDRCPRYQRSPEQ 370
+R RGG+ K R S GSS +RQ K S R P+ QR +Q
Sbjct: 20 RRERGGARWCGKCRSSGSGSDGSSGGGKRQAAAKSSSKKRQPQRQRQQQQ 69
>06_03_0025 -
15577231-15577420,15577682-15577813,15578025-15578173,
15579012-15579071,15593208-15593297,15593604-15593871,
15594517-15594608,15595355-15595441,15597333-15597440,
15597709-15597822,15598253-15598420,15599442-15599579,
15599699-15599908,15600986-15601237,15601965-15602111,
15603327-15603443
Length = 773
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 255 SERFPLPDDHCRHYLFPEFRFTLFDCGHNHVPGTGRRQS 371
S R PLP+D C Y+ ++R + H+ G R S
Sbjct: 25 SSRVPLPEDTCDSYVEQKYRCYIRTLKGCHISGRNRLDS 63
>03_05_0989 + 29483281-29484612
Length = 443
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 513 RGRGGSAGAKFRI-SPGSPSGSSNQLRRQHRGKESVCD 403
RGRGG A A+ R SP SGS+ ++ + G +V D
Sbjct: 40 RGRGGKASARARSQSPPGGSGSAARVEVEGMGASAVPD 77
>11_06_0538 +
24759030-24759379,24759380-24759488,24759604-24759692,
24760179-24760287,24760370-24760471,24760564-24760628,
24760830-24760936,24761023-24761087,24761163-24761217,
24761305-24761465
Length = 403
Score = 27.5 bits (58), Expect = 8.0
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +1
Query: 199 LLTMTPALSSKY-INTPSRLLNGFRCLMTT--AGITFFRSSGLPFLTVATIMSPEPAAGS 369
LLT P + + SRL R L AG+ FF S+ + + I+ P P++
Sbjct: 37 LLTQRPCVEGTMTMGEQSRLPESLRLLDAAFDAGVNFFDSAEMYYYAPLLILPPPPSSFP 96
Query: 370 LFR 378
LF+
Sbjct: 97 LFQ 99
>04_04_1074 + 30628192-30628456,30628924-30629144
Length = 161
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 489 AKFRISPGSPSGSSNQLRRQHRGKESVCDRCP 394
A F S +P+ + +LRRQH + VCD P
Sbjct: 2 AFFAGSSKAPASARLKLRRQHDQQREVCDALP 33
>04_04_0832 - 28507448-28507516,28507902-28507980,28508527-28509614
Length = 411
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 507 RGGSAGAKFRISPGSPSGSSNQLRRQHRGKESVCDRC 397
RGG G ++ G+ +GS+ + R + K C RC
Sbjct: 32 RGGGGGGAPPVAGGAGAGSTERRARPQKEKALNCPRC 68
>04_04_0162 - 23210732-23211739
Length = 335
Score = 27.5 bits (58), Expect = 8.0
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -3
Query: 519 SKRGRGGSAGAKFRISPGSPSGSSNQLRRQHRGKESVCDRCPRYQRSPEQTAGGRFR--G 346
++ G GG AGA R+SP S ++ R V D QR+ TA G R
Sbjct: 20 ARGGGGGGAGAAGRLSPNYYRHSCPRVER------IVADVVAAKQRANPSTAAGTLRLFF 73
Query: 345 HDC 337
HDC
Sbjct: 74 HDC 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,590,251
Number of Sequences: 37544
Number of extensions: 383134
Number of successful extensions: 1212
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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