Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_E01
(785 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC336.09c |rrn7||RNA polymerase I transcription factor subunit... 29 0.76
SPAC21E11.04 |ppr1||L-azetidine-2-carboxylic acid acetyltransfer... 27 2.3
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.0
SPCC1020.07 |||haloacid dehalogenase-like hydrolase|Schizosaccha... 26 7.0
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 26 7.0
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 26 7.0
SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family Sec14|Schi... 26 7.0
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 25 9.3
SPBC887.10 |mcs4||two-component response regulator |Schizosaccha... 25 9.3
>SPBC336.09c |rrn7||RNA polymerase I transcription factor subunit
Rrn7 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 29.1 bits (62), Expect = 0.76
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 624 WEKETDKLNVAQNSHFQELDTQETYDVTNSEQD 526
W + K+N + F E+D Q + NSE D
Sbjct: 373 WLSQVQKINEKEKDKFYEIDEQSILTLNNSEMD 405
>SPAC21E11.04 |ppr1||L-azetidine-2-carboxylic acid acetyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 209
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 266 NQSIKFSPVNGFKGSVFSAVSAVECTSTNVRSVKL 370
N + F+P GFK SVF+ V A TN++S++L
Sbjct: 138 NAYLYFAPRIGFKSSVFNLVFA-----TNIKSIRL 167
>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 27.1 bits (57), Expect = 3.0
Identities = 34/108 (31%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Frame = -3
Query: 537 SEQDLNASLIIPQXXXXXKIENVTPIK-PVTIKASPGGVRNPFRKQQEV---TKCVQSPL 370
SE D N + + + ++TP + PVT P + P EV T SPL
Sbjct: 277 SENDANITALPKPEPKMYENSDLTPARTPVT----PAPLEKPVNLAPEVVEPTNAAASPL 332
Query: 369 SLTERTLVEVHSTADTAENTDPLKPLTGENFMDWFTRNKSLLEE-RNP 229
L L +V D+A DP K GE D F N LE NP
Sbjct: 333 QLNAPKLTDVD---DSALAYDPTKVQDGE---DRFVHNDVPLENAENP 374
>SPCC1020.07 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 321 QYQLWSVPLPMSVLLNLTDFVHILSLPVAF*MDSERH 431
Q +LW P+ ++NL + L++P+A S+ H
Sbjct: 78 QAELWRHTKPLPGVMNLLSKLKSLNIPIALATSSDTH 114
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 25.8 bits (54), Expect = 7.0
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = -3
Query: 762 RSEIEQRALELMELXKDDRLL---PXAAKYASRLGRMHLAEK-LTNLAESWEKETDKLNV 595
RSEI + + + + KD L P + ++ +++ LTN +S+EK+ L
Sbjct: 83 RSEIANQGKQHIRIAKDLETLIIAPFSKMSIDHSQKLQTSQQVLTNQIKSYEKKYYTLKK 142
Query: 594 AQNSHFQELDTQETYDVTNSEQDLNAS 514
+++++ + E Y+ + E + S
Sbjct: 143 TKSAYYNKCRNLEDYEEESKESNETTS 169
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 206 PGTALKYSKTYNRSLTLTRINGNTKTQNGDTTTSAPKQS 90
PG+ + +K Y++ LTL+ + N +T S P++S
Sbjct: 1070 PGSDMPSAKLYDQQLTLSPSLMTNQGSNFSSTDSTPRKS 1108
>SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family
Sec14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 286
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = -3
Query: 762 RSEIEQRALELMELXKDDRLLPXAAKYASRLGRMHLAEKLTNL--AESWEKETDKLNVAQ 589
++ ++ LEL +L +RL R + +L + L E W KE ++ +
Sbjct: 29 QATLDSMRLELQKLGYTERLDDATLLRFLRARKFNLQQSLEMFIKCEKWRKEFGVDDLIK 88
Query: 588 NSHFQELDTQETY 550
N H+ E + Y
Sbjct: 89 NFHYDEKEAVSKY 101
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 648 KLTNLAESWEKETDKLNVAQN-SHFQELDTQETYD 547
KL S ++ETD +N+AQN S + D Q+ D
Sbjct: 283 KLDEKILSLQRETDDVNIAQNKSKLIQRDLQKVLD 317
>SPBC887.10 |mcs4||two-component response regulator
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -3
Query: 567 DTQETYDVTNSEQDLNASLIIPQXXXXXKIENVTPIKPVTIKASPG-GVRNPF 412
D + + +++ LNA +I+ + PV + SPG G + PF
Sbjct: 299 DISSQFPIADNKDPLNADTQAHLGFPSNQIDGIVGTSPVNVLTSPGIGAKAPF 351
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,995,274
Number of Sequences: 5004
Number of extensions: 58760
Number of successful extensions: 190
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 381366860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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