Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_D16
         (620 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1427 - 27020819-27020918,27021017-27021081,27021160-270212...    29   3.0  
09_04_0713 - 19675437-19675551,19675872-19676017,19676226-196762...    28   5.2  
09_02_0253 - 6319198-6319240,6319364-6319552,6319650-6319995,632...    28   5.2  
05_04_0372 + 20726103-20726139,20726266-20726302,20726953-207270...    27   9.1  

>08_02_1427 -
           27020819-27020918,27021017-27021081,27021160-27021246,
           27021398-27021466,27022168-27022219,27022443-27022525,
           27022677-27022753,27022880-27023074,27023204-27023261,
           27023862-27023956,27024605-27024758
          Length = 344

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = -2

Query: 409 ILSI*WVIVQSCFGLRKYL--CVVYAGVTIVIXXXXXXXXXXXKPNLTNGPVLTMF 248
           ++ + W+ +++ +GLRK++   V  AG+ +V+            PN   G +L +F
Sbjct: 126 VIILTWIFLKTKYGLRKFIGVGVCVAGLILVVFSDVHASDRAKGPNPLKGDLLVIF 181


>09_04_0713 -
           19675437-19675551,19675872-19676017,19676226-19676259,
           19676333-19676473,19676860-19676924,19677022-19677108,
           19677186-19677254,19677457-19677548,19677781-19677853,
           19678129-19678205,19678490-19678684,19678804-19678861,
           19679423-19679517,19680071-19680191
          Length = 455

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -2

Query: 409 ILSI*WVIVQSCFGLRKYLCVV--YAGVTIVIXXXXXXXXXXXKPNLTNGPVLTM 251
           ++ + WV +++ +GLRK++ VV   AG+ +V+            PN   G +  +
Sbjct: 115 VILLTWVFLKTKYGLRKFIGVVICVAGIILVVFSDVHASDRAKGPNPLKGDLFVI 169


>09_02_0253 -
           6319198-6319240,6319364-6319552,6319650-6319995,
           6320811-6320893,6320977-6321074,6321384-6321461,
           6321891-6322000,6322083-6322180,6323199-6323296,
           6323403-6323463,6323688-6323831,6324103-6324206,
           6324634-6324787,6324860-6324879,6324967-6325029,
           6326521-6326632,6326711-6326796,6326872-6326899,
           6327242-6327293,6329034-6329250
          Length = 727

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 53  FNKHAQLLVVGRDSVSLQVLCLTI 124
           F KH +L ++  D V LQ LC+TI
Sbjct: 266 FAKHERLCMLSIDHVKLQYLCITI 289


>05_04_0372 +
           20726103-20726139,20726266-20726302,20726953-20727048,
           20728343-20728625,20728862-20728981,20729072-20729284
          Length = 261

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/24 (45%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
 Frame = -2

Query: 463 IQCLISIFY--PYISPNNLEILSI 398
           I CL+S +Y  P++SPNN+ + +I
Sbjct: 50  INCLLSAWYGLPFVSPNNILVSTI 73


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,444,658
Number of Sequences: 37544
Number of extensions: 364791
Number of successful extensions: 659
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)