Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_D16
         (620 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    23   1.8  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    23   1.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.5  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +1

Query: 193 HKVYRLQLQCKKIQNYMDKTLSELGHWLS 279
           H     Q QCKK      + L +L  W +
Sbjct: 66  HITEAFQTQCKKCTEIQKQNLDKLAEWFT 94


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +1

Query: 193 HKVYRLQLQCKKIQNYMDKTLSELGHWLS 279
           H     Q QCKK      + L +L  W +
Sbjct: 66  HITEAFQTQCKKCTEIQKQNLDKLAEWFT 94


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 617 NVTIRSRSRFSVFLFWSPFNLLY 549
           NV + + S FS++ F    NL++
Sbjct: 467 NVELHNSSPFSIYSFLERLNLIF 489


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 617 NVTIRSRSRFSVFLFWSPFNLLY 549
           NV + + S FS++ F    NL++
Sbjct: 505 NVELHNSSPFSIYSFLERLNLIF 527


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,834
Number of Sequences: 438
Number of extensions: 4200
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)