Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_D08
(779 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 103 1e-22
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 78 7e-15
09_04_0360 - 16944990-16945202,16945288-16945377,16945525-169457... 78 9e-15
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 69 6e-12
07_03_1563 - 27746977-27747180,27747280-27747369,27747529-277477... 68 7e-12
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 67 2e-11
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 60 2e-09
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 58 6e-09
10_01_0076 - 987092-987671,987747-987812,988201-988363,988467-98... 34 0.15
05_02_0047 + 6006808-6007129,6009229-6009890,6009980-6010129,601... 29 4.1
03_05_0078 + 20555296-20555560,20555643-20555887,20555947-205561... 29 4.1
02_02_0440 - 10273032-10273259,10273423-10273461,10273875-102741... 29 4.1
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 29 5.5
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 29 5.5
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 28 7.2
01_04_0076 + 15780981-15780996,15781277-15783109,15783186-157833... 28 9.6
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 103 bits (248), Expect = 1e-22
Identities = 51/133 (38%), Positives = 82/133 (61%)
Frame = -2
Query: 721 GEGQWGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAK 542
GE + GTDE F I RS+ + + + Y + + +E +K E SG+ E +L I +
Sbjct: 166 GEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNFELALLTILR 225
Query: 541 CVKSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIAE 362
C ++ +FA+ L SMKG+GT+D TLIR+VV+R+EID+ IK + +KY KSL I
Sbjct: 226 CAENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHS 285
Query: 361 DLTGDFKHVLVTL 323
+ +G+++ L++L
Sbjct: 286 ETSGNYRTFLLSL 298
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 78.2 bits (184), Expect = 7e-15
Identities = 35/92 (38%), Positives = 61/92 (66%)
Frame = -2
Query: 598 SIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGD 419
++K E SG+ G+L I +C +S +FA+ L+ +MKG+GTND TLIR+V +R+E+D+
Sbjct: 250 AVKSETSGNFGFGLLTILRCAESPAKYFAKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQY 309
Query: 418 IKQAFLEKYGKSLETWIAEDLTGDFKHVLVTL 323
IK + Y +SL + + +G+++ L++L
Sbjct: 310 IKAEYHRSYKRSLADAVHSETSGNYRTFLLSL 341
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -2
Query: 514 AERLYYS-MKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIAEDLTGDFKH 338
A LY + + +GT+++T IR+ RS + + A+ Y +SLE I T +
Sbjct: 177 ARELYRAGERRLGTDERTFIRVFSERSAAHMAAVAAAYHHMYDRSLEKVIYRSCTAAYAL 236
Query: 337 VLV 329
LV
Sbjct: 237 ALV 239
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = -2
Query: 706 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 548
GT+++ ++ TR+ ++ I AEY + + D++ E SG+ +L++
Sbjct: 289 GTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSETSGNYRTFLLSL 341
>09_04_0360 -
16944990-16945202,16945288-16945377,16945525-16945746,
16945854-16946081,16946163-16946372
Length = 320
Score = 77.8 bits (183), Expect = 9e-15
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Frame = -2
Query: 715 GQWGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCV 536
G DE++ + RS QLR F Y+ + G D ++KK G E+ + + KC+
Sbjct: 182 GMGSVDEAVILEMFSKRSIPQLRLAFCSYKHIYGHDYTKALKKNGFGEFEQSLRVVVKCI 241
Query: 535 KSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIAEDL 356
+ +F++ L+ S++ TN + + R ++ ++D+ IK F YGK LE +I E L
Sbjct: 242 YNPSMYFSKLLHRSLQCSATNKRLVTRAILGSDDVDMDKIKSVFKSSYGKDLEDFILESL 301
Query: 355 -TGDFKHVLV 329
D++ L+
Sbjct: 302 PENDYRDFLL 311
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 68.5 bits (160), Expect = 6e-12
Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
Frame = -2
Query: 703 TDESIFNSILITRSYQQLRQIFAEYEALTG----KDIEDSIKKEFSGSIEKGMLAIAKCV 536
+D+ I IL TRS QL F Y G KD++ K EF G++ AI +C
Sbjct: 112 SDDEIIR-ILTTRSKAQLLATFNSYNDQFGHPITKDLKADPKDEFLGTLR----AIIRCF 166
Query: 535 KSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIAEDL 356
+F + + ++ G+GT++ +L RI+ +R+E+DL IK+A+ ++ LE +A+D
Sbjct: 167 TCPDRYFEKVIRLALGGMGTDENSLTRIITTRAEVDLKLIKEAYQKRNSVPLERAVAKDT 226
Query: 355 TGDFKHVLVTL 323
T D++ +L+ L
Sbjct: 227 TRDYEDILLAL 237
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = -2
Query: 511 ERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIAEDLTGDFKHVL 332
E+L + KG GTN+K +I I+ R I++A+ E YG+ L + +++ G F+ +L
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFE-LL 76
Query: 331 VTL 323
V L
Sbjct: 77 VPL 79
Score = 33.5 bits (73), Expect = 0.19
Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Frame = -2
Query: 709 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIE--KGMLAIAKCV 536
WGT+E + SIL R Q R I Y G+++ ++ E G E ++ + +
Sbjct: 27 WGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFELLVPLVTVYRYD 86
Query: 535 KSKVGFF-----AERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETW 371
+V A+ L+ + +D +IRI+ +RS+ L ++ +++G +
Sbjct: 87 GPEVNTSLAHSEAKILHEKIHDKAYSDDEIIRILTTRSKAQLLATFNSYNDQFGHPITKD 146
Query: 370 IAEDLTGDF 344
+ D +F
Sbjct: 147 LKADPKDEF 155
>07_03_1563 -
27746977-27747180,27747280-27747369,27747529-27747753,
27748002-27748115,27748218-27748423,27748757-27748832
Length = 304
Score = 68.1 bits (159), Expect = 7e-12
Identities = 40/128 (31%), Positives = 65/128 (50%)
Frame = -2
Query: 706 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSK 527
G DE + I+ TRS QLR F Y G DI + I G + + C+ S
Sbjct: 174 GEDEVV--RIVTTRSKSQLRATFQRYREDHGSDIAEDIDSHCIGQFGRMLKTAVWCLTSP 231
Query: 526 VGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIAEDLTGD 347
FAE + +S+ G+GT + L R++VSR+EID+ I++ + +Y ++ + D +
Sbjct: 232 EKHFAEVIRHSILGLGTYEDMLTRVIVSRAEIDMRHIREEYKVRYKTTVTRDVVGDTSFG 291
Query: 346 FKHVLVTL 323
+K L+ L
Sbjct: 292 YKGFLLAL 299
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 66.9 bits (156), Expect = 2e-11
Identities = 40/129 (31%), Positives = 68/129 (52%)
Frame = -2
Query: 709 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKS 530
+G DE I IL TRS QL F Y G I +K + + AI +C
Sbjct: 186 YGDDEII--RILTTRSKAQLIATFNRYNDEYGHPINKDLKADPKDEFLSTLRAIIRCFCC 243
Query: 529 KVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIAEDLTG 350
+F + + ++ G+GT++ +L RI+ +R+E+DL I +A+ ++ LE +A D +G
Sbjct: 244 PDRYFEKVIRLAIAGMGTDENSLTRIITTRAEVDLKLITEAYQKRNSVPLERAVAGDTSG 303
Query: 349 DFKHVLVTL 323
D++ +L+ L
Sbjct: 304 DYERMLLAL 312
Score = 63.7 bits (148), Expect = 2e-10
Identities = 39/129 (30%), Positives = 63/129 (48%)
Frame = -2
Query: 709 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKS 530
WGT+E++ SIL R Q R I Y G+++ SI E SG E+ ++
Sbjct: 27 WGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAVILWTLDPAE 86
Query: 529 KVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIAEDLTG 350
+ A + G+ + L+ I +R L ++QA+ E++ +SLE +A TG
Sbjct: 87 RDAVLANEVARKWYP-GSGSRVLVEIACARGPAQLFAVRQAYHERFKRSLEEDVAAHATG 145
Query: 349 DFKHVLVTL 323
DF+ +LV L
Sbjct: 146 DFRKLLVPL 154
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/61 (27%), Positives = 36/61 (59%)
Frame = -2
Query: 511 ERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIAEDLTGDFKHVL 332
++L + +G GTN+ +I I+ R I++A+ + YG+ L I ++++GDF+ +
Sbjct: 18 DQLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAV 77
Query: 331 V 329
+
Sbjct: 78 I 78
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/119 (28%), Positives = 62/119 (52%)
Frame = -2
Query: 679 ILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLY 500
I+ TRS QL Y GK I++ + + + A C+ S FAE +
Sbjct: 246 IVGTRSKAQLAVTLERYRQEHGKGIDEVLDGRRGDQLAAVLKAALWCLTSPEKHFAEVIR 305
Query: 499 YSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIAEDLTGDFKHVLVTL 323
S+ G+GT+++ L R +VSR+E+D+ +K+ + +Y ++ + D +G + + L+TL
Sbjct: 306 TSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRYNTTVTADVRGDTSGYYMNTLLTL 364
Score = 44.0 bits (99), Expect = 1e-04
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
Frame = -2
Query: 709 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKS 530
WGTDE+ IL R+ Q +I YE L + + D + E SG ++ +
Sbjct: 73 WGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLLDRLHSELSGDFRSALMLWTMDPAA 132
Query: 529 KVGFFA-ERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIAE-DL 356
+ A E L KG + L+ + + S L +++A+ Y SLE +A L
Sbjct: 133 RDAKLANEALKKKKKGELRHIWVLVEVACASSPDHLVAVRKAYRAAYASSLEEDVASCSL 192
Query: 355 TGD-FKHVLVTL 323
GD + LV L
Sbjct: 193 FGDPLRRFLVRL 204
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 58.4 bits (135), Expect = 6e-09
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = -2
Query: 703 TDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIA-KCVKSK 527
TD I+ TRS QL F+ + G I +++ + L A +C+
Sbjct: 157 TDHGELIRIVGTRSRAQLNATFSWFRDERGTSITKALQHGADPTGYSHALRTALRCISDA 216
Query: 526 VGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIAEDLTGD 347
+F + L +M GTN+ +L R++V +E DL IK AF ++ +LE I D +GD
Sbjct: 217 NKYFVKVLRNAMHKSGTNEDSLTRVIVLHAEKDLKGIKDAFQKRASVALEKAIGNDTSGD 276
Query: 346 FKHVLVTL 323
+K L+ L
Sbjct: 277 YKSFLMAL 284
Score = 36.7 bits (81), Expect = 0.021
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -2
Query: 709 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGM 557
WGTDE +L R Q +QI YE +++ ++ E SG +E+ M
Sbjct: 27 WGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQRLQSELSGDLERAM 77
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 514 AERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIAEDLTGDFKHV 335
A+ L + +G GT+++ +I ++ R I+ + E Y ++L + +L+GD +
Sbjct: 17 ADALLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQRLQSELSGDLERA 76
Query: 334 L 332
+
Sbjct: 77 M 77
>10_01_0076 -
987092-987671,987747-987812,988201-988363,988467-988548,
989153-989202,989237-989270,990177-990239,990339-990403,
990485-990560,991274-991353,991514-991628,991729-991830
Length = 491
Score = 33.9 bits (74), Expect = 0.15
Identities = 25/71 (35%), Positives = 33/71 (46%)
Frame = -1
Query: 629 RSFDRKRH*GLDQERILW*H*EGHARYCQMRKEQGRFLR*APVLLDEGHRHQRQDAHPHR 450
R DR R G D ER GH R+ + +++ R A D GH H+R DA
Sbjct: 367 RDRDRDRDRGRDYERD---RDRGHDRHRERGRDRERDYERASHERDRGHMHER-DAEFAN 422
Query: 449 GEPLRDRPRGH 417
GEP D+ G+
Sbjct: 423 GEPKHDQEYGY 433
>05_02_0047 +
6006808-6007129,6009229-6009890,6009980-6010129,
6010765-6010857,6011370-6011675
Length = 510
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -1
Query: 509 APVLLDEGHRHQRQDAHPHRGEPLRDRPRGHQAGIPREVRQV 384
AP+L H H H H E + G + +P +VR V
Sbjct: 283 APLLQPHSHSHSHPHGHGHGHELAQPEGSGGEGEVPAQVRSV 324
>03_05_0078 +
20555296-20555560,20555643-20555887,20555947-20556180,
20556451-20556537,20556624-20556959,20557057-20557194,
20557231-20557311,20557392-20557480,20557750-20557813,
20557896-20557985,20558064-20558186
Length = 583
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 342 LKSPVRSSAIQVSRDLPYFSRNACLMSPRSISERLTTMRMSVLSLVP 482
L S ++ + + +PY NA +S S+ +R T +M+V S+VP
Sbjct: 490 LISSANANGRRFNPSIPYERTNAKQLSEESLGKRSRTSQMNVKSMVP 536
>02_02_0440 -
10273032-10273259,10273423-10273461,10273875-10274123,
10274203-10274329,10275009-10275251,10275359-10275457,
10275566-10275681,10275813-10276039,10276164-10276276,
10276402-10276522,10276641-10276855,10277042-10277225,
10277739-10278048,10278155-10278249,10278473-10278485
Length = 792
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 393 YFSRNACLMSPRSISERLTTMRMSVLS 473
YF AC+ P SERL R+SVL+
Sbjct: 519 YFLAAACIFEPNRASERLAWARVSVLA 545
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -2
Query: 463 LIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIAEDLTGDFKHVLV 329
L+ +V +R ++ I+QA+ +Y SLE ++ +G VL+
Sbjct: 127 LVEVVCTRPSGEVALIRQAYQARYSASLERDVSSRTSGSLNEVLL 171
Score = 27.9 bits (59), Expect = 9.6
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Frame = -2
Query: 700 DESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVG 521
D + ++ TR ++ I Y+A +E + SGS+ + +LA S G
Sbjct: 123 DGDVLVEVVCTRPSGEVALIRQAYQARYSASLERDVSSRTSGSLNEVLLAFLG--SSGSG 180
Query: 520 FFAERLYYSMKGIGTNDKTLIRIV-VSRSEIDLGDIKQAFLEKYGKSLETWIA 365
+ R+ +M + KTL V +S + +D + Q + G L +A
Sbjct: 181 YHGGRVDATM--AMCDAKTLYEAVEISAARVDQRSVLQLLRHRSGDQLRAVLA 231
>03_02_0308 -
7297228-7298008,7298495-7298576,7298612-7298669,
7298723-7298835,7298924-7299034,7299480-7299597,
7299706-7299809,7300570-7300665,7301806-7302307
Length = 654
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 485 HRHQRQDAHPHRGEPLRDRPRGHQAGIPREVRQV 384
H H R H HR + +R G AG ++ R+V
Sbjct: 138 HSHHRHGGHHHRSDSVRGGGTGATAGSDKDGREV 171
>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 729 PPLVKVNGEPTNQSSTPSLSLAPISS*DRSSPSTKL*PEKTL 604
P ++K + P+ ++PS S A D S+PST PE+T+
Sbjct: 2006 PAVIKSSDTPSLNLNSPSSSSAGSRGQDASTPSTFEEPERTM 2047
>01_04_0076 +
15780981-15780996,15781277-15783109,15783186-15783304,
15783422-15783724
Length = 756
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -2
Query: 538 VKSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGK 386
V+S V FA Y ++K + N K L+R+ S LG +KQA +K K
Sbjct: 412 VRSGVTRFATA-YLNLKSLLDNKKELVRLFKSNEMEQLGYLKQAKGKKASK 461
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,642,218
Number of Sequences: 37544
Number of extensions: 341247
Number of successful extensions: 968
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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