Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_D07
         (482 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0873 - 32372143-32372287,32372678-32372754,32372863-323730...    54   5e-08
07_03_1385 + 26189034-26189294,26189427-26189636,26191016-261910...    53   1e-07
09_04_0359 + 16941904-16942110,16943636-16943785,16944084-169442...    48   5e-06
03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312     48   5e-06
03_05_1098 - 30395704-30395837,30396644-30396751,30396933-303971...    31   0.37 
03_02_0270 - 7011363-7012302,7013237-7013640,7014264-7014333,701...    29   1.5  
05_04_0310 + 20114415-20117819                                         27   6.0  
01_01_0205 + 1764034-1767601,1767934-1767944                           27   6.0  
12_01_0198 - 1461305-1463812                                           27   7.9  

>02_05_0873 -
           32372143-32372287,32372678-32372754,32372863-32373072,
           32374645-32374869
          Length = 218

 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 22/52 (42%), Positives = 33/52 (63%)
 Frame = -1

Query: 314 YLQQREERFRQTSESTNQRVLWWSLLQTGVLVIIGYWQMRHLKSFFEAKKLV 159
           YL+ RE   R  SE TN RV W+S+L   V +++   Q+ HL+ +F+ KKL+
Sbjct: 167 YLKAREAEMRTVSEKTNARVAWFSILSLSVCIVVSILQLWHLQGYFQKKKLI 218


>07_03_1385 +
           26189034-26189294,26189427-26189636,26191016-26191092,
           26191196-26191340
          Length = 230

 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 21/54 (38%), Positives = 35/54 (64%)
 Frame = -1

Query: 320 IYYLQQREERFRQTSESTNQRVLWWSLLQTGVLVIIGYWQMRHLKSFFEAKKLV 159
           ++YL++REE  +  ++ TN R+ W   L  G+ + +   Q+ HLK+FFE KKL+
Sbjct: 177 MFYLREREEEMQNLNKQTNSRMAWLGFLSLGICLSVAGLQLWHLKTFFERKKLL 230


>09_04_0359 +
           16941904-16942110,16943636-16943785,16944084-16944293,
           16944376-16944452,16944554-16944698
          Length = 262

 Score = 47.6 bits (108), Expect = 5e-06
 Identities = 20/51 (39%), Positives = 30/51 (58%)
 Frame = -1

Query: 311 LQQREERFRQTSESTNQRVLWWSLLQTGVLVIIGYWQMRHLKSFFEAKKLV 159
           L+ +E   R TSE TN R  W S++   V +I+   Q+ HL+ +F  KKL+
Sbjct: 212 LRSKEANMRDTSEKTNARATWLSIISLIVCIIVSVLQLWHLQQYFRKKKLI 262


>03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312
          Length = 232

 Score = 47.6 bits (108), Expect = 5e-06
 Identities = 19/54 (35%), Positives = 32/54 (59%)
 Frame = -1

Query: 320 IYYLQQREERFRQTSESTNQRVLWWSLLQTGVLVIIGYWQMRHLKSFFEAKKLV 159
           ++YL+ REE  ++ +  TN R+ W       + + +   Q+ HLK+FFE KKL+
Sbjct: 179 MFYLRAREEEMQELNRRTNSRMAWLGFFSLAICLSVAGLQLWHLKNFFERKKLL 232


>03_05_1098 -
           30395704-30395837,30396644-30396751,30396933-30397119,
           30398127-30398330
          Length = 210

 Score = 31.5 bits (68), Expect = 0.37
 Identities = 12/27 (44%), Positives = 21/27 (77%)
 Frame = -1

Query: 314 YLQQREERFRQTSESTNQRVLWWSLLQ 234
           YL+ RE R R T+EST +RV+++++ +
Sbjct: 156 YLKAREARHRHTNESTRRRVMFYTIAE 182


>03_02_0270 -
           7011363-7012302,7013237-7013640,7014264-7014333,
           7014835-7015331,7015959-7016283,7018060-7018292
          Length = 822

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 17  LLKNTDCYKTLF*TVSLLQSITHSTDLQKNKDK 115
           +L+N D +K     V+ L S+ H +DLQK KD+
Sbjct: 112 VLRNADLHKIQTELVACLPSLPHLSDLQKLKDE 144


>05_04_0310 + 20114415-20117819
          Length = 1134

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +3

Query: 156  LH*FLSLKKALEMSHLPVTDDDKDTCL 236
            LH   SLK+ L++S+L +TD++  TCL
Sbjct: 970  LHALTSLKR-LQISYLEMTDEELGTCL 995


>01_01_0205 + 1764034-1767601,1767934-1767944
          Length = 1192

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 360 RISRNNWEYGFTHDLFEIKNINLIKLS 440
           R+S NN E  F    F++KN+ ++ LS
Sbjct: 290 RLSHNNLEGWFPDKFFQLKNLRILDLS 316


>12_01_0198 - 1461305-1463812
          Length = 835

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
 Frame = -3

Query: 366 KFCCKTTISVTIVNVNLLFTAKRRAFPTNIRKHK-PAGALV---EFATD 232
           K C + T +V ++ V ++F +  R FP   R+   P GA +   + ATD
Sbjct: 3   KSCSRATATVLLLLVVVVFLSSSRPFPCEARRDSLPRGASIAVEDHATD 51


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,772,817
Number of Sequences: 37544
Number of extensions: 154612
Number of successful extensions: 324
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 324
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)