Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_D01
         (309 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075548-1|AAL68355.1|   73|Drosophila melanogaster RH49308p pro...    89   1e-18
AY061306-1|AAL28854.1|  743|Drosophila melanogaster LD22256p pro...    57   5e-09
AJ635208-1|CAG25590.1| 1153|Drosophila melanogaster CAP-G protei...    57   5e-09
AE013599-1638|AAS64861.1|  743|Drosophila melanogaster CG17054-P...    57   5e-09
AE013599-1634|AAF58425.4| 1153|Drosophila melanogaster CG17054-P...    57   5e-09
AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA...    27   4.7  
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros...    27   6.2  
AF367177-1|AAK31263.1| 1183|Drosophila melanogaster chromatin as...    27   6.2  
AE014298-1215|AAF46399.1| 1183|Drosophila melanogaster CG12109-P...    27   6.2  

>AY075548-1|AAL68355.1|   73|Drosophila melanogaster RH49308p
           protein.
          Length = 73

 Score = 88.6 bits (210), Expect = 1e-18
 Identities = 36/69 (52%), Positives = 52/69 (75%)
 Frame = -3

Query: 226 MWYEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTGNPYE 47
           MW+EILP   IIT  + +P + +Y +  L +GN +RR++ +R+SR +YQRD RLT NPY+
Sbjct: 1   MWFEILPGAVIITTLLSVPIYAMYGLDKLMIGNAFRRNMNERFSRVMYQRDFRLTDNPYK 60

Query: 46  VNGLEAIPD 20
           +NGL+AIPD
Sbjct: 61  MNGLDAIPD 69


>AY061306-1|AAL28854.1|  743|Drosophila melanogaster LD22256p
           protein.
          Length = 743

 Score = 56.8 bits (131), Expect = 5e-09
 Identities = 22/35 (62%), Positives = 31/35 (88%)
 Frame = -3

Query: 124 YRRSLTDRWSRALYQRDMRLTGNPYEVNGLEAIPD 20
           +RR++ +R+SR +YQRD RLT NPY++NGL+AIPD
Sbjct: 705 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 739


>AJ635208-1|CAG25590.1| 1153|Drosophila melanogaster CAP-G protein
            protein.
          Length = 1153

 Score = 56.8 bits (131), Expect = 5e-09
 Identities = 22/35 (62%), Positives = 31/35 (88%)
 Frame = -3

Query: 124  YRRSLTDRWSRALYQRDMRLTGNPYEVNGLEAIPD 20
            +RR++ +R+SR +YQRD RLT NPY++NGL+AIPD
Sbjct: 1115 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 1149


>AE013599-1638|AAS64861.1|  743|Drosophila melanogaster CG17054-PE,
           isoform E protein.
          Length = 743

 Score = 56.8 bits (131), Expect = 5e-09
 Identities = 22/35 (62%), Positives = 31/35 (88%)
 Frame = -3

Query: 124 YRRSLTDRWSRALYQRDMRLTGNPYEVNGLEAIPD 20
           +RR++ +R+SR +YQRD RLT NPY++NGL+AIPD
Sbjct: 705 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 739


>AE013599-1634|AAF58425.4| 1153|Drosophila melanogaster CG17054-PA,
            isoform A protein.
          Length = 1153

 Score = 56.8 bits (131), Expect = 5e-09
 Identities = 22/35 (62%), Positives = 31/35 (88%)
 Frame = -3

Query: 124  YRRSLTDRWSRALYQRDMRLTGNPYEVNGLEAIPD 20
            +RR++ +R+SR +YQRD RLT NPY++NGL+AIPD
Sbjct: 1115 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 1149


>AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA
           protein.
          Length = 841

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +3

Query: 180 TAAVIMKKLGRISYHIILNSRIPSYTSVFVRKITVTIGRPNS 305
           +A+ +++K  R    ++   R PSYTS+ +R +  +  RPNS
Sbjct: 312 SASALVRKHHRSQRSLLPEHRHPSYTSISLRGLNAS--RPNS 351


>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
           Drosophila melanogastercopia-like element 17.6. ).
          Length = 1058

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 176 TNSSSNNEKTRKNFVPHYSKFSYPKLHK 259
           TN + +   T+ N +P YSK+SYP+ ++
Sbjct: 194 TNQTKHTINTKHN-LPLYSKYSYPQAYE 220


>AF367177-1|AAK31263.1| 1183|Drosophila melanogaster chromatin
           assembly factor-1 p180subunit protein.
          Length = 1183

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 197 EKTRKNFVPHYSKFSYPKLHKCFRSENNSDH 289
           E+ +K     +SKF  PK  KC    NN+ +
Sbjct: 599 EQKKKRAAESFSKFFVPKQPKCGSGSNNTSY 629


>AE014298-1215|AAF46399.1| 1183|Drosophila melanogaster CG12109-PB
           protein.
          Length = 1183

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 197 EKTRKNFVPHYSKFSYPKLHKCFRSENNSDH 289
           E+ +K     +SKF  PK  KC    NN+ +
Sbjct: 599 EQKKKRAAESFSKFFVPKQPKCGSGSNNTSY 629


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,519,581
Number of Sequences: 53049
Number of extensions: 241973
Number of successful extensions: 866
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)