Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_C19
         (664 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0017 + 8990852-8990938,8991056-8991243,8991687-8991795,899...   111   5e-25
10_06_0164 + 11364436-11367280,11367357-11367715                       32   0.35 

>11_03_0017 +
           8990852-8990938,8991056-8991243,8991687-8991795,
           8992448-8992832,8993240-8993309,8993410-8993477,
           8995009-8995124,8995211-8995317,8995488-8995627,
           8995794-8996044
          Length = 506

 Score =  111 bits (267), Expect = 5e-25
 Identities = 57/140 (40%), Positives = 87/140 (62%)
 Frame = -1

Query: 652 KRRRFLIEKCKDANIIGILICKLSGKQTKDIISRMKELCKVNGKKSYIVSVGKPNSAKLA 473
           +RR +L+EK KDANI+GIL+  L       II +MK+L K  GKKSY + +G+PNSAKLA
Sbjct: 278 RRRYYLVEKAKDANIVGILVGTLGVAGYLHIIEQMKDLIKAAGKKSYTLVMGRPNSAKLA 337

Query: 472 NFPEIDIYVMIACPENDLYSSRDFYRPIVFPYELEIALNSNREPFPTYHVTDYDELLPGR 293
           NFPE +++V ++C +  L  S+DF  P++ P+E  +A +  RE +   ++ D+ +L+   
Sbjct: 338 NFPECEVFVYVSCAQTALLDSKDFLAPVITPFEAVLAFSRGRE-WTGEYLLDFKDLITTD 396

Query: 292 RHYGDIKPIQEIADVSLITG 233
           +   +I    E A  S I G
Sbjct: 397 K--PEISSTTEEARFSFIKG 414


>10_06_0164 + 11364436-11367280,11367357-11367715
          Length = 1067

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +3

Query: 540 SSFILLMISLVCLPDSLHISIPIILASLHFSIRKRLR 650
           S  ILL+   V +P ++ I +  ILA++ FSIRK+LR
Sbjct: 693 SRSILLVTQKVVIPTAVTIFVCFILAAVVFSIRKKLR 729


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,861,744
Number of Sequences: 37544
Number of extensions: 286263
Number of successful extensions: 600
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)