Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_C18
         (781 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131281-1|BAD18456.1|  692|Homo sapiens protein ( Homo sapiens ...    31   6.1  
AB107355-1|BAC67660.1|  738|Homo sapiens KIAA2033 protein protein.     31   6.1  
BC044642-1|AAH44642.1|  506|Homo sapiens RC3H2 protein protein.        30   8.1  
AL359512-8|CAI94964.1| 1191|Homo sapiens ring finger and CCCH-ty...    30   8.1  
AF255303-1|AAG00432.1| 1048|Homo sapiens membrane-associated nuc...    30   8.1  

>AK131281-1|BAD18456.1|  692|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16231 fis, clone FEBRA2027609, moderately
           similar to Zinc finger protein 91. ).
          Length = 692

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 345 DKYSLILCY*FLF*KKKNLCCQLRCATVVLPFDCH 449
           DKY   +C   LF +K+NL C  RC T   P+ C+
Sbjct: 186 DKYKCDVCG-KLFNQKRNLACHRRCHTGENPYKCN 219


>AB107355-1|BAC67660.1|  738|Homo sapiens KIAA2033 protein protein.
          Length = 738

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 345 DKYSLILCY*FLF*KKKNLCCQLRCATVVLPFDCH 449
           DKY   +C   LF +K+NL C  RC T   P+ C+
Sbjct: 260 DKYKCDVCG-KLFNQKRNLACHRRCHTGENPYKCN 293


>BC044642-1|AAH44642.1|  506|Homo sapiens RC3H2 protein protein.
          Length = 506

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 22  LCQNAFGGDDNLDLSLGCFLLTIKRCTDKIHR 117
           +C N F  + +  +SLGC     K C +K+HR
Sbjct: 16  ICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47


>AL359512-8|CAI94964.1| 1191|Homo sapiens ring finger and CCCH-type
           zinc finger domains 2 protein.
          Length = 1191

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 22  LCQNAFGGDDNLDLSLGCFLLTIKRCTDKIHR 117
           +C N F  + +  +SLGC     K C +K+HR
Sbjct: 16  ICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47


>AF255303-1|AAG00432.1| 1048|Homo sapiens membrane-associated
           nucleic acid binding protein protein.
          Length = 1048

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 22  LCQNAFGGDDNLDLSLGCFLLTIKRCTDKIHR 117
           +C N F  + +  +SLGC     K C +K+HR
Sbjct: 16  ICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,446,453
Number of Sequences: 237096
Number of extensions: 2100932
Number of successful extensions: 2454
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2454
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)