Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_C15
         (710 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067948-4|AAO25983.1|  756|Caenorhabditis elegans Egl-27 relate...    45   5e-05
AF067948-3|AAO25984.1|  870|Caenorhabditis elegans Egl-27 relate...    45   5e-05
AF067948-2|AAD34654.1|  870|Caenorhabditis elegans Egl-27 relate...    45   5e-05
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate...    45   5e-05
Z70279-4|CAA94242.2|  559|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AL023841-2|CAC42358.1|  559|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z70279-1|CAE46679.1|  309|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>AF067948-4|AAO25983.1|  756|Caenorhabditis elegans Egl-27 related
           protein 1, isoform c protein.
          Length = 756

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -2

Query: 688 CASCQVTSSNQWYSWGPQHLQYRLCGTCWQYWKKYGGL 575
           C +C    +  WY WG    +  LC TCW  WKK+ GL
Sbjct: 587 CENCGTLDALNWYQWGGVGDKKVLCSTCWIQWKKFAGL 624


>AF067948-3|AAO25984.1|  870|Caenorhabditis elegans Egl-27 related
           protein 1, isoform d protein.
          Length = 870

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -2

Query: 688 CASCQVTSSNQWYSWGPQHLQYRLCGTCWQYWKKYGGL 575
           C +C    +  WY WG    +  LC TCW  WKK+ GL
Sbjct: 587 CENCGTLDALNWYQWGGVGDKKVLCSTCWIQWKKFAGL 624


>AF067948-2|AAD34654.1|  870|Caenorhabditis elegans Egl-27 related
           protein 1, isoform b protein.
          Length = 870

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -2

Query: 688 CASCQVTSSNQWYSWGPQHLQYRLCGTCWQYWKKYGGL 575
           C +C    +  WY WG    +  LC TCW  WKK+ GL
Sbjct: 587 CENCGTLDALNWYQWGGVGDKKVLCSTCWIQWKKFAGL 624


>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
           protein 1, isoform a protein.
          Length = 1022

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -2

Query: 688 CASCQVTSSNQWYSWGPQHLQYRLCGTCWQYWKKYGGL 575
           C +C    +  WY WG    +  LC TCW  WKK+ GL
Sbjct: 587 CENCGTLDALNWYQWGGVGDKKVLCSTCWIQWKKFAGL 624


>Z70279-4|CAA94242.2|  559|Caenorhabditis elegans Hypothetical
           protein K11E8.1a protein.
          Length = 559

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = -3

Query: 339 ETITNRLDAYFKVQIKFYSLICNLINNREKGPLGLIRPFSNSSH-IXSNDT 190
           + + N++ A +K+++K      NL+N +E+GP   I+  S SS  I  ND+
Sbjct: 337 QVLLNKIFATYKIKMKQCR---NLLNKKEQGPPSTIKESSESSQTIDDNDS 384


>AL023841-2|CAC42358.1|  559|Caenorhabditis elegans Hypothetical
           protein K11E8.1a protein.
          Length = 559

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = -3

Query: 339 ETITNRLDAYFKVQIKFYSLICNLINNREKGPLGLIRPFSNSSH-IXSNDT 190
           + + N++ A +K+++K      NL+N +E+GP   I+  S SS  I  ND+
Sbjct: 337 QVLLNKIFATYKIKMKQCR---NLLNKKEQGPPSTIKESSESSQTIDDNDS 384


>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical protein
            W09G3.6 protein.
          Length = 1125

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 335  VSQRVATRAISAALYSPVSVPIVIPEFKEV 424
            V  R ATRA S+A  SPV+ PI+ P  +++
Sbjct: 1096 VRARRATRAGSSATSSPVASPIMSPRHQKI 1125


>Z70279-1|CAE46679.1|  309|Caenorhabditis elegans Hypothetical
           protein K11E8.1m protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 306 KVQIKFYSLICNLINNREKGPLGLIRPFSNSSH-IXSNDT 190
           K++++   L  NL+N +E+GP   I+  S SS  I  ND+
Sbjct: 95  KLEVEADDLGRNLLNKKEQGPPSTIKESSESSQTIDDNDS 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,039,787
Number of Sequences: 27780
Number of extensions: 272300
Number of successful extensions: 736
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)