BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_C14
(708 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50472-1|AAA93475.1| 141|Anopheles gambiae protein ( Anopheles ... 101 3e-23
AY928182-1|AAX22219.1| 335|Anopheles gambiae phenoloxidase inhi... 28 0.33
AY341159-1|AAR13723.1| 159|Anopheles gambiae CED6 protein. 24 5.4
AY341158-1|AAR13722.1| 159|Anopheles gambiae CED6 protein. 24 5.4
AY341157-1|AAR13721.1| 159|Anopheles gambiae CED6 protein. 24 5.4
>U50472-1|AAA93475.1| 141|Anopheles gambiae protein ( Anopheles
gambiae putativefatty acid binding protein mRNA, partial
cds. ).
Length = 141
Score = 101 bits (241), Expect = 3e-23
Identities = 47/92 (51%), Positives = 60/92 (65%)
Frame = -1
Query: 657 GKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKF 478
GKKYKM SE FD++M +GVG++ RK N+++PTVEL K+GDEY T S +T
Sbjct: 35 GKKYKMEKSEGFDDYMLALGVGMVLRKLGNSISPTVELVKNGDEYTFNTLSPSRTRRSSS 94
Query: 477 KPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 382
EF+E+ DG VKSVCTF+GN L QK
Sbjct: 95 SWAMEFDEETVDGRMVKSVCTFDGNKLIHEQK 126
>AY928182-1|AAX22219.1| 335|Anopheles gambiae phenoloxidase
inhibitor protein protein.
Length = 335
Score = 27.9 bits (59), Expect = 0.33
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 95 GDETKISLATTVTTVGRLCAK 33
GDET L TT T+V ++CAK
Sbjct: 149 GDETSSILTTTHTSVPKMCAK 169
>AY341159-1|AAR13723.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 579 KAANAVTPTVELRKDGDEYNLVTSST 502
K VTPT + GD+ N +ST
Sbjct: 89 KTGTGVTPTSSIASSGDDTNSSNNST 114
>AY341158-1|AAR13722.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 579 KAANAVTPTVELRKDGDEYNLVTSST 502
K VTPT + GD+ N +ST
Sbjct: 89 KTGTGVTPTSSIASSGDDTNSSNNST 114
>AY341157-1|AAR13721.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 579 KAANAVTPTVELRKDGDEYNLVTSST 502
K VTPT + GD+ N +ST
Sbjct: 89 KTGTGVTPTSSIASSGDDTNSSNNST 114
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,860
Number of Sequences: 2352
Number of extensions: 12311
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -