Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_C13
         (734 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   2.3  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   2.3  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   3.0  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   6.9  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   9.1  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = -2

Query: 634 QNLIKNPCSQACSCRISDGEPQFDCAAVDCVESFDSDLQECVKTYELDS 488
           ++L+K   S+    ++   +  FD   +DC++S   +L   V  Y  D+
Sbjct: 7   KSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDA 55


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = -2

Query: 634 QNLIKNPCSQACSCRISDGEPQFDCAAVDCVESFDSDLQECVKTYELDS 488
           ++L+K   S+    ++   +  FD   +DC++S   +L   V  Y  D+
Sbjct: 23  KSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDA 71


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +3

Query: 12  LSEQC-LASQAFCLKHXTKGGTSQIHVVHCSPTVISSPTDSVWL 140
           L+ +C L +   CL+       S I V+  SP ++ +   + WL
Sbjct: 162 LASKCALTTLTDCLRSELAQCESNIKVISISPDLVETDMTAQWL 205


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = -2

Query: 664 ASYTDRSPL--PQNLIKNPCSQACSCRISDGEPQFDCAAVDCVESF 533
           A+Y D + +  PQN  +N    A    + +  P+F    + C+  F
Sbjct: 169 ATYVDINYVEYPQNSKRNSEESAICAMLKENMPEFPLYQLSCILFF 214


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 366 ASVHPTGVAPRTTQL 322
           A+VHP G+ P   QL
Sbjct: 455 ANVHPVGINPGKMQL 469


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,485
Number of Sequences: 438
Number of extensions: 4778
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)