Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_C11
         (513 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92806-2|CAB07257.1|  303|Caenorhabditis elegans Hypothetical pr...    33   0.12 
U41007-21|AAK84502.1|  465|Caenorhabditis elegans Hypothetical p...    27   6.0  
U41007-20|AAA82275.1|  455|Caenorhabditis elegans Hypothetical p...    27   6.0  
Z99772-1|CAB16921.1|  794|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z75550-14|CAA99932.1|  794|Caenorhabditis elegans Hypothetical p...    27   7.9  

>Z92806-2|CAB07257.1|  303|Caenorhabditis elegans Hypothetical
           protein K10G4.2 protein.
          Length = 303

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 14/49 (28%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
 Frame = +1

Query: 148 NFYIIAHHLLPSLNG--HFVILYFISNSKAKSRKFSFWRAKTSNLTLVE 288
           N+  + +  L  +NG  HF+I+YF+++    + K  FW+ KT+++ +++
Sbjct: 241 NYLSVTYSFLSVINGAIHFLIVYFMASEYRTAAKGLFWK-KTNSVAIID 288


>U41007-21|AAK84502.1|  465|Caenorhabditis elegans Hypothetical
           protein C33H5.18b protein.
          Length = 465

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
 Frame = +1

Query: 133 ILLSTNF--YIIAHHLLPSLNGHFV--ILYFISNSKAK-SRKFSF--WRAKTSNLTLVEC 291
           +L   NF  +++A+H L S   + +  + + +S  K    R+FS   W   T  L + + 
Sbjct: 178 VLKKDNFLHFLVAYHRLVSFALYCIGFVSFVLSLRKGYYMRQFSLFAWTHLTLLLIVSQS 237

Query: 292 YFLIVNSASKLLWYL 336
           +F+I N    L+W+L
Sbjct: 238 FFIIQNIFQGLIWFL 252


>U41007-20|AAA82275.1|  455|Caenorhabditis elegans Hypothetical
           protein C33H5.18a protein.
          Length = 455

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
 Frame = +1

Query: 133 ILLSTNF--YIIAHHLLPSLNGHFV--ILYFISNSKAK-SRKFSF--WRAKTSNLTLVEC 291
           +L   NF  +++A+H L S   + +  + + +S  K    R+FS   W   T  L + + 
Sbjct: 168 VLKKDNFLHFLVAYHRLVSFALYCIGFVSFVLSLRKGYYMRQFSLFAWTHLTLLLIVSQS 227

Query: 292 YFLIVNSASKLLWYL 336
           +F+I N    L+W+L
Sbjct: 228 FFIIQNIFQGLIWFL 242


>Z99772-1|CAB16921.1|  794|Caenorhabditis elegans Hypothetical
           protein H05L14.1 protein.
          Length = 794

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 13/56 (23%), Positives = 32/56 (57%)
 Frame = -1

Query: 471 AFLHHLSEVINEEMQLPFYRGVECYIENIRSSDDFKAWELCGKLNQIPKEFRSAID 304
           A+++ + ++I+ E  L + +   C +  I+  ++FK   L    +++P+EF+  +D
Sbjct: 315 AWIYMIYDLIDPENGLSWRKSPRCNMM-IKEKENFKYHVLPHTYDKVPEEFKKLVD 369


>Z75550-14|CAA99932.1|  794|Caenorhabditis elegans Hypothetical
           protein H05L14.1 protein.
          Length = 794

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 13/56 (23%), Positives = 32/56 (57%)
 Frame = -1

Query: 471 AFLHHLSEVINEEMQLPFYRGVECYIENIRSSDDFKAWELCGKLNQIPKEFRSAID 304
           A+++ + ++I+ E  L + +   C +  I+  ++FK   L    +++P+EF+  +D
Sbjct: 315 AWIYMIYDLIDPENGLSWRKSPRCNMM-IKEKENFKYHVLPHTYDKVPEEFKKLVD 369


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,810,451
Number of Sequences: 27780
Number of extensions: 210147
Number of successful extensions: 447
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)