Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_C10
(378 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellu... 32 0.71
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 31 1.2
AF007192-1|AAC02270.1| 338|Homo sapiens intestinal mucin protein. 31 1.6
CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein. 30 2.9
BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein. 30 2.9
AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein. 29 5.0
BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C. ele... 29 6.6
BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein. 29 6.6
AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein. 29 6.6
AL136778-1|CAB66712.2| 266|Homo sapiens hypothetical protein pr... 29 6.6
AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens ... 29 6.6
AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein. 29 6.6
>AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellular
receptor 1 protein.
Length = 359
Score = 31.9 bits (69), Expect = 0.71
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -1
Query: 249 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLXP 97
T +TT RTS +P TTT+ T + ++ T TVP S+ P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVP 186
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -1
Query: 261 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 103
T+ T T TT T++ +P TTT+ T T +STT + T T+S+P+
Sbjct: 149 TVPTTTTVPTTTVPTTMSIPTTTTVPTTMT-VSTTTSVP-TTTSIPTTTSVPV 199
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 270 LWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLT 118
L +L T T+ L+T++ P+T T M TN +T+ T PK + T
Sbjct: 417 LTTSLAPTLTSELSTSQAETSTPRTETTMSPLTNTTTSQGTTRCQPKCEWT 467
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 264 PTLKETATNLLTTARTSLILPKTTTLMETAT-NLSTTVHITWTVPKADLTSSLPLXPGA 91
PT ++T T T L TTT +T LS+T TW + + T+++ PG+
Sbjct: 3023 PTATPSSTPGTTWILTELTTTATTTASTGSTATLSSTPGTTWILTEPSTTATVTAPPGS 3081
>AF007192-1|AAC02270.1| 338|Homo sapiens intestinal mucin protein.
Length = 338
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 267 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 106
WPT T ++L T +S +P T TN++ + T+P +T S P
Sbjct: 179 WPTATNTLSSLTTNILSSTPVPSTERTTSHTTNINPVSTLVTTLP-TTITRSTP 231
>CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein.
Length = 364
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 249 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 133
T +TT RTS +P TTT+ T T +TTV T ++P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPMT-TVPTTTVPTTMSIP 173
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = -1
Query: 231 TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 103
TT T++ +P TTT++ T T +STT + T T+S+P+
Sbjct: 164 TTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPV 204
>BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein.
Length = 364
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 249 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 133
T +TT RTS +P TTT+ T T +TTV T ++P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPMT-TVPTTTVPTTMSIP 173
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = -1
Query: 231 TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 103
TT T++ +P TTT++ T T +STT + T T+S+P+
Sbjct: 164 TTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPV 204
>AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein.
Length = 589
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -1
Query: 264 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 106
PT T ++L ++ +S ++P T + TNL+ + + T+P +T S P
Sbjct: 400 PTANSTLSSLTSSILSSTLVPSTDMITSHTTNLTRSSPLLATLP-TTITRSTP 451
>BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C.
elegans) protein.
Length = 569
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 193 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXP 98
N NGNGY G V P G P +PT P
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDP 365
>BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein.
Length = 569
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 193 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXP 98
N NGNGY G V P G P +PT P
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDP 365
>AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein.
Length = 569
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 193 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXP 98
N NGNGY G V P G P +PT P
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDP 365
>AL136778-1|CAB66712.2| 266|Homo sapiens hypothetical protein
protein.
Length = 266
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 193 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXP 98
N NGNGY G V P G P +PT P
Sbjct: 31 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDP 62
>AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens
cDNA FLJ16544 fis, clone OCBBF3003761. ).
Length = 569
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 193 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXP 98
N NGNGY G V P G P +PT P
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDP 365
>AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein.
Length = 501
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 193 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXP 98
N NGNGY G V P G P +PT P
Sbjct: 266 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDP 297
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,054,519
Number of Sequences: 237096
Number of extensions: 1251497
Number of successful extensions: 6641
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6633
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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