Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_C10
(378 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 1.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.2
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 2.8
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 4.8
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 6.4
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 6.4
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 20 8.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 20 8.4
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 20 8.4
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 1.2
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 155 CILRGPSPRPTLLQA-YPFXLVLAVGSKEYL 66
C+LR +P P +L+A + VL V ++ +L
Sbjct: 1106 CVLRASTPAPVVLEAVHASRRVLIVLTRNFL 1136
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 1.2
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 295 MIFVLALLAMANAQGNGYEPIDNRP-YIVNPP 203
+IFV A A+ +A G+G++ P +++ PP
Sbjct: 6 LIFVGAAAAVTSAGGHGFDAHLRGPSFVMEPP 37
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/29 (27%), Positives = 14/29 (48%)
Frame = -1
Query: 204 PKTTTLMETATNLSTTVHITWTVPKADLT 118
P+ +ETA S ++++ W D T
Sbjct: 908 PQPPNSLETAMVASRSINVKWQHKSQDTT 936
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 1.2
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 295 MIFVLALLAMANAQGNGYEPIDNRP-YIVNPP 203
+IFV A A+ +A G+G++ P +++ PP
Sbjct: 6 LIFVGAAAAVTSAGGHGFDAHLRGPSFVMEPP 37
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/29 (27%), Positives = 14/29 (48%)
Frame = -1
Query: 204 PKTTTLMETATNLSTTVHITWTVPKADLT 118
P+ +ETA S ++++ W D T
Sbjct: 904 PQPPNSLETAMVASRSINVKWQHKSQDTT 932
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 2.8
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = -1
Query: 234 LTTARTSLILPKTTTLMETATNLSTTVHITWTVPKAD 124
+TT T+ TTT T N + T P+ D
Sbjct: 658 ITTITTTTTTTTTTTTTTTTPNTTQNASATTPPPQVD 694
Score = 20.2 bits (40), Expect = 8.4
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -3
Query: 208 PPKDYNPNGNGYEPIDNGAYYVDRPQGRP 122
PP+D+ P Y +D + D+P P
Sbjct: 417 PPEDWKPLDKCYFCLDGKLPHDDQPPLSP 445
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.0 bits (42), Expect = 4.8
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = -3
Query: 232 DNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTP 104
+N Y N +YN N N Y Y ++ + P P P
Sbjct: 92 NNNNYNNNNYNNYNYNNNNYNNYKKLYYNINYIEQIPVPVPVP 134
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 20.6 bits (41), Expect = 6.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 289 FVLALLAMANAQGNG 245
FV+ +L +A GNG
Sbjct: 57 FVIGMLGFVSAMGNG 71
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 20.6 bits (41), Expect = 6.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 193 NPNGNGYEPIDNGAYYVDRP 134
N GN + D+GA DRP
Sbjct: 254 NAAGNNEDSSDSGAAASDRP 273
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 318 SRVITGENIKVVLI 359
S ITG N+K VL+
Sbjct: 109 SSAITGNNVKDVLV 122
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 8.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = -3
Query: 199 DYNPNGNGYEPIDNGAYYVDR 137
+YN N Y+P+ Y+++
Sbjct: 323 NYNNYNNNYKPLHYNINYIEQ 343
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 20.2 bits (40), Expect = 8.4
Identities = 13/54 (24%), Positives = 21/54 (38%)
Frame = -3
Query: 364 RPMSTTLIFSPVITRDHIKMKFFMIFVLALLAMANAQGNGYEPIDNRPYIVNPP 203
RP+S I SP R + + + FV+ + + P N + N P
Sbjct: 169 RPVSYPQIMSPRRARLLVATVWILSFVICFPPLVGWKDKRSHPAYNMTFAQNGP 222
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,891
Number of Sequences: 438
Number of extensions: 2774
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9176370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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