Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_C07
         (775 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0183 + 26537676-26537752,26538481-26538649,26538736-265389...    56   2e-08
04_04_0712 + 27476319-27476569,27477150-27477402,27477535-274779...    50   2e-06
03_06_0226 + 32495088-32495237,32496189-32496351,32496438-324965...    48   8e-06
03_05_0497 + 24932336-24932485,24934037-24934199,24934306-249344...    44   1e-04
06_03_1047 - 27133869-27134345,27134444-27134701,27134841-271350...    29   5.4  
03_02_0693 - 10441253-10441294,10441404-10441511,10441594-104416...    28   9.5  

>02_05_0183 +
           26537676-26537752,26538481-26538649,26538736-26538910,
           26539008-26539137,26540425-26540558,26540629-26540771,
           26540894-26541092,26541183-26541514
          Length = 452

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 36/91 (39%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
 Frame = -2

Query: 774 KGNFYVKFDVVFPENHFANEXQXXQIETILPPRPAFVMPTGE--DVEEVNLMDYFTPSES 601
           KG  +V+F+V FPE       Q   +E ILPPRP   +   E    EE  + D     E 
Sbjct: 362 KGRLFVEFNVEFPEPGALTPGQCRSLEKILPPRPRNQLSDMELDQCEETTMHDVNIEEEM 421

Query: 600 SR----GREEAYASDDEEHMHACPGVQCAHQ 520
            R     R+EAY  DD+E   A P VQCA Q
Sbjct: 422 RRRQQHRRQEAYDEDDDEDAGAGPRVQCAQQ 452


>04_04_0712 +
           27476319-27476569,27477150-27477402,27477535-27477914,
           27479738-27479864,27479945-27480110,27480221-27480359,
           27481854-27481987,27482087-27482229,27482367-27482565,
           27482688-27483010
          Length = 704

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
 Frame = -2

Query: 774 KGNFYVKFDVVFPENHFANEXQXXQIETILPPRPAFVMPTG--EDVEEVNLMDYFTPSES 601
           KG  +V+F+V FPE+   +  Q   +E ILPP+P   +     +  EE  + D     E 
Sbjct: 617 KGRLFVEFNVEFPESGVLSRDQCRALEMILPPKPGHQLSDMDLDQCEETTMHDVNIEEEM 676

Query: 600 SR----GREEAYASDDEEHMHACPGVQCAHQ 520
            R     ++EAY  D+EE     P VQCA Q
Sbjct: 677 RRKQYQRKQEAYDEDEEED---APRVQCAQQ 704


>03_06_0226 +
           32495088-32495237,32496189-32496351,32496438-32496576,
           32496669-32496945,32497051-32497249,32497379-32497704
          Length = 417

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
 Frame = -2

Query: 774 KGNFYVKFDVVFPENHFANEXQXXQIETILPPRPAFVMPTGE--DVEEVNLMDYFTPSES 601
           KG  Y+ F V FP++   N  Q   +ET+LPPRP       E  + EE    D     E 
Sbjct: 329 KGKLYIHFSVEFPDS--LNPDQCKALETVLPPRPVSQYTDMELDECEETMPYDVNIEEEM 386

Query: 600 SRGRE----EAYASDDEEHMHACPGVQCAHQ 520
            R ++    EAY  D++ H      VQCA Q
Sbjct: 387 RRRQQQQQQEAYDEDEDMHGGGAQRVQCAQQ 417


>03_05_0497 +
           24932336-24932485,24934037-24934199,24934306-24934447,
           24934528-24934804,24934887-24935085,24935169-24935491
          Length = 417

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
 Frame = -2

Query: 774 KGNFYVKFDVVFPENHFANEXQXXQIETILPPRPAFVMPTGE--DVEEVNLMDYFTPSES 601
           KG  Y+ F V FP++  A E Q   +E +LPP+PA  +   E  + EE  + D     E 
Sbjct: 330 KGKLYIHFTVEFPDS-LAPE-QCKALEAVLPPKPASQLTEMEIDECEETTMHDVNNIEEE 387

Query: 600 SRGR----EEAYASDDEEHMHACPGVQCAHQ 520
            R +    +EAY  DDE    A   VQCA Q
Sbjct: 388 MRRKAQAAQEAYDEDDEMPGGA-QRVQCAQQ 417


>06_03_1047 -
           27133869-27134345,27134444-27134701,27134841-27135041,
           27135242-27135584,27135674-27135732,27136256-27136581,
           27136753-27136849,27137072-27137182,27137691-27138305,
           27139578-27139880
          Length = 929

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -2

Query: 678 RPAFVMPTGEDVEEVNLMDYFTPSESSRGREEAYASDDEEHMHACPGVQCA 526
           RPA     G+++E+V L+D +   E   G   A A ++EE      G+ C+
Sbjct: 14  RPAAAGGGGDEMEDVRLLDSY-DEEMGGGAAAAAAGEEEEAHVRVTGMTCS 63


>03_02_0693 -
           10441253-10441294,10441404-10441511,10441594-10441677,
           10441765-10443062,10443111-10444804,10444890-10444957,
           10445057-10445186,10445292-10445415,10445551-10445711,
           10446714-10446868
          Length = 1287

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -2

Query: 651 EDVEEVNLMDYFTPSESSRGREEAYASDD 565
           EDVEE N  D +T  E++   EE   SDD
Sbjct: 719 EDVEESNESDAYTLDENTEYIEEQVVSDD 747


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,649,832
Number of Sequences: 37544
Number of extensions: 230149
Number of successful extensions: 444
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)