Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_C07
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 50 2e-06
CU457743-1|CAM36364.1| 692|Caenorhabditis elegans Hypothetical ... 34 0.13
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81468-2|CAN99666.1| 950|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81468-1|CAB03875.3| 1010|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical ... 29 3.7
Z99270-2|CAB16469.3| 477|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 28 8.5
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 8.5
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Frame = -2
Query: 774 KGNFYVKFDVVFPENHFANEXQXXQIETILPPRPAFVMPTGEDVEEVNLMDYFTPSESSR 595
KGN +V+F+V FP+ HF ++ + + P V T EV+LM+Y + SR
Sbjct: 353 KGNLFVEFEVEFPKEHFLDDEKAYAVLKSCFPTSKVVNVT-PAAAEVSLMEY-DEKKYSR 410
Query: 594 GR-EEAY--ASDDEEH-MHACPGVQCAHQ 520
GR +AY SD+E+H H GV+C HQ
Sbjct: 411 GRGGDAYNEDSDEEQHGGHHGQGVRCQHQ 439
>CU457743-1|CAM36364.1| 692|Caenorhabditis elegans Hypothetical
protein K09E10.1 protein.
Length = 692
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -3
Query: 551 TLALAFNVLINSKICF-MCNSNLQQFIIGSVI*FYST 444
T++ AFN ++ SK+ F + + QF+IG +I FYST
Sbjct: 176 TISFAFNFILPSKVSFNSLLARIWQFLIGMIIYFYST 212
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 29.9 bits (64), Expect = 2.1
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Frame = -2
Query: 774 KGNFYVKFDVVFPENHFANEXQXXQIETILPPRPAFVMPTGEDVEEVNLMDYFTPSESSR 595
KG+ V+FDV FP+ N ++ +LP + ++ ED E V L + P S R
Sbjct: 319 KGDLLVQFDVKFPDK--INPDAAKKLADLLPGKREEII--DEDAEVVELTE-LDPQASRR 373
Query: 594 GREEAYASDDEE-------HMHACPGVQC 529
E DD E H H GVQC
Sbjct: 374 NFAE---RDDFEGHGGFGGHGHGPQGVQC 399
>Z81468-2|CAN99666.1| 950|Caenorhabditis elegans Hypothetical
protein C13B4.1b protein.
Length = 950
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 642 EEVNLMDYFTPSESSRGREEAYASDDEEHMHACPGVQCA 526
+E L++ F S+ +GR A ++EHM P ++C+
Sbjct: 50 DETLLLELFVNSDEEKGRYVAVGFSNDEHMGNEPVIECS 88
>Z81468-1|CAB03875.3| 1010|Caenorhabditis elegans Hypothetical
protein C13B4.1a protein.
Length = 1010
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 642 EEVNLMDYFTPSESSRGREEAYASDDEEHMHACPGVQCA 526
+E L++ F S+ +GR A ++EHM P ++C+
Sbjct: 50 DETLLLELFVNSDEEKGRYVAVGFSNDEHMGNEPVIECS 88
>AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical
protein T22H9.1 protein.
Length = 457
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -2
Query: 684 PPRPAFVMPTGEDVEEVNLMDYFTPSESSRGREEAYASDDE 562
P PA P ++VEE D SE S G EE +DE
Sbjct: 181 PAPPAPKKPKNQNVEEEGSEDELERSEGSEGSEEEEDDEDE 221
>Z99270-2|CAB16469.3| 477|Caenorhabditis elegans Hypothetical
protein Y37A1A.2 protein.
Length = 477
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 455 FYSTYISQIFKKKILC*QGLNCNSCNFILF-IFCNFSDSCFCQMTNKI*INSWIYKNIYL 279
F I ++ K K++ ++C S +LF ++C+ + + T+ + N WI + YL
Sbjct: 309 FIRPMIKRLHKYKLIVPMAVHCTSMAIVLFLVYCSVPNQATQRPTSDL-ANLWITPSRYL 367
Query: 278 T 276
+
Sbjct: 368 S 368
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 711 QXXQIETILPPRPAFVMPTGEDVEEV 634
Q Q+ET + P+P FV+P+G E+
Sbjct: 472 QVKQLETKVTPKPNFVVPSGTTTTEL 497
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 711 QXXQIETILPPRPAFVMPTGEDVEEV 634
Q Q+ET + P+P FV+P+G E+
Sbjct: 472 QVKQLETKVTPKPNFVVPSGTTTTEL 497
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 711 QXXQIETILPPRPAFVMPTGEDVEEV 634
Q Q+ET + P+P FV+P+G E+
Sbjct: 472 QVKQLETKVTPKPNFVVPSGTTTTEL 497
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,199,779
Number of Sequences: 27780
Number of extensions: 253814
Number of successful extensions: 621
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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