Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_B24
(470 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68270-9|CAE54911.1| 307|Caenorhabditis elegans Hypothetical pr... 41 4e-04
Z68270-8|CAC35869.1| 309|Caenorhabditis elegans Hypothetical pr... 41 4e-04
Z68270-7|CAA92571.2| 109|Caenorhabditis elegans Hypothetical pr... 41 4e-04
AF202930-1|AAK69380.1| 109|Caenorhabditis elegans Ny protein. 41 4e-04
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 31 0.55
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 31 0.55
AF067215-5|AAC17010.3| 441|Caenorhabditis elegans T box family ... 30 0.73
Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical pr... 30 0.96
Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical pr... 30 0.96
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 30 0.96
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 30 0.96
Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family ... 27 5.1
Z83127-6|CAB05633.1| 327|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z80214-6|CAB02266.1| 327|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical pr... 27 9.0
>Z68270-9|CAE54911.1| 307|Caenorhabditis elegans Hypothetical
protein ZC410.7c protein.
Length = 307
Score = 41.1 bits (92), Expect = 4e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = -3
Query: 333 RVALSRFYNKIVITDDGSTIVALHQDYDFPYEHSRA--LPEETSKDNTVLKMTDLDEVKR 160
R A S K+V+ +G TI A H FPYEH++ L T KD + + L +
Sbjct: 11 RFASSDSPRKVVVCANG-TIAAWHPPQHFPYEHTKPIDLGSLTKKDQS----SRLSAAAK 65
Query: 159 VFNEMKPEFARKQLSNLTLTTEHRWYPRARDKKAK 55
+ + E +L ++ T++H WY R R+++ +
Sbjct: 66 A-SSIPREPVNAELKDIFYTSKHEWYSRTREERLR 99
>Z68270-8|CAC35869.1| 309|Caenorhabditis elegans Hypothetical
protein ZC410.7b protein.
Length = 309
Score = 41.1 bits (92), Expect = 4e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = -3
Query: 333 RVALSRFYNKIVITDDGSTIVALHQDYDFPYEHSRA--LPEETSKDNTVLKMTDLDEVKR 160
R A S K+V+ +G TI A H FPYEH++ L T KD + + L +
Sbjct: 11 RFASSDSPRKVVVCANG-TIAAWHPPQHFPYEHTKPIDLGSLTKKDQS----SRLSAAAK 65
Query: 159 VFNEMKPEFARKQLSNLTLTTEHRWYPRARDKKAK 55
+ + E +L ++ T++H WY R R+++ +
Sbjct: 66 A-SSIPREPVNAELKDIFYTSKHEWYSRTREERLR 99
>Z68270-7|CAA92571.2| 109|Caenorhabditis elegans Hypothetical
protein ZC410.7a protein.
Length = 109
Score = 41.1 bits (92), Expect = 4e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = -3
Query: 333 RVALSRFYNKIVITDDGSTIVALHQDYDFPYEHSRA--LPEETSKDNTVLKMTDLDEVKR 160
R A S K+V+ +G TI A H FPYEH++ L T KD + + L +
Sbjct: 11 RFASSDSPRKVVVCANG-TIAAWHPPQHFPYEHTKPIDLGSLTKKDQS----SRLSAAAK 65
Query: 159 VFNEMKPEFARKQLSNLTLTTEHRWYPRARDKKAK 55
+ + E +L ++ T++H WY R R+++ +
Sbjct: 66 A-SSIPREPVNAELKDIFYTSKHEWYSRTREERLR 99
>AF202930-1|AAK69380.1| 109|Caenorhabditis elegans Ny protein.
Length = 109
Score = 41.1 bits (92), Expect = 4e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = -3
Query: 333 RVALSRFYNKIVITDDGSTIVALHQDYDFPYEHSRA--LPEETSKDNTVLKMTDLDEVKR 160
R A S K+V+ +G TI A H FPYEH++ L T KD + + L +
Sbjct: 11 RFASSDSPRKVVVCANG-TIAAWHPPQHFPYEHTKPIDLGSLTKKDQS----SRLSAAAK 65
Query: 159 VFNEMKPEFARKQLSNLTLTTEHRWYPRARDKKAK 55
+ + E +L ++ T++H WY R R+++ +
Sbjct: 66 A-SSIPREPVNAELKDIFYTSKHEWYSRTREERLR 99
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 30.7 bits (66), Expect = 0.55
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = -3
Query: 267 LHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHR 88
+ +DYD YE + + +D +LK E + F E K ++ T ++R
Sbjct: 390 IKEDYDELYEKLKRDQRDLERDQKILK-KGTGERNKEFTETIATLRDKLRASETKNAQYR 448
Query: 87 WYPRARDKKAKKTE 46
R RD+K KK +
Sbjct: 449 QDIRVRDEKLKKKD 462
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 30.7 bits (66), Expect = 0.55
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = -3
Query: 267 LHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHR 88
+ +DYD YE + + +D +LK E + F E K ++ T ++R
Sbjct: 390 IKEDYDELYEKLKRDQRDLERDQKILK-KGTGERNKEFTETIATLRDKLRASETKNAQYR 448
Query: 87 WYPRARDKKAKKTE 46
R RD+K KK +
Sbjct: 449 QDIRVRDEKLKKKD 462
>AF067215-5|AAC17010.3| 441|Caenorhabditis elegans T box family
protein 32 protein.
Length = 441
Score = 30.3 bits (65), Expect = 0.73
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = -3
Query: 375 NEMSYLTRKIALIPRVALSRFYNKIVITDDGSTIVALHQDYDFPYEHSRALPEETSKDNT 196
N M ++ I L S+ N S+ AL+QD F E S + ++ + +N
Sbjct: 312 NPMDQQSKSIDLNQTTWTSQSINNQSYLSTASSPAALNQD-SFASEKSSIVRDKKNDENC 370
Query: 195 VLKMTDLDEVKRVFNEMKPEF--ARKQLSNLTLTTEHRWYPRARDKKAKKTEMN 40
LDE RVFNE+ +F QL +L+ T W + + ++N
Sbjct: 371 ------LDEFDRVFNELDQQFTPTENQLQDLSNCT--TWNQEPINNSIQSNQLN 416
>Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical
protein C08F8.2b protein.
Length = 719
Score = 29.9 bits (64), Expect = 0.96
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 210 SKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHRWYPRARDKKAK 55
+KD +L LD K+VF ++ + +S+LT H WYP AR K
Sbjct: 139 TKDCEMLYPFFLDHAKQVFPHLEAMDDLRIISDLT--RPHNWYPEARSVTRK 188
>Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical
protein C08F8.2a protein.
Length = 721
Score = 29.9 bits (64), Expect = 0.96
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 210 SKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHRWYPRARDKKAK 55
+KD +L LD K+VF ++ + +S+LT H WYP AR K
Sbjct: 141 TKDCEMLYPFFLDHAKQVFPHLEAMDDLRIISDLT--RPHNWYPEARSVTRK 190
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 29.9 bits (64), Expect = 0.96
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = -3
Query: 342 LIPRVALSRFYNKIVITDDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVK 163
LI L YNK+ + +G + Q + LPE LK+ DL E +
Sbjct: 315 LIQLTVLHLSYNKLELVPEGISRCVKLQKLKLDHNRLITLPEGIHLLPD-LKVLDLHENE 373
Query: 162 RVFNEMKPEFARKQLS--NLTLTTEHR 88
+ KP ARK+L+ N+ + EH+
Sbjct: 374 NLVMPPKPNDARKKLAFYNIDFSLEHQ 400
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 29.9 bits (64), Expect = 0.96
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = -3
Query: 342 LIPRVALSRFYNKIVITDDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVK 163
LI L YNK+ + +G + Q + LPE LK+ DL E +
Sbjct: 315 LIQLTVLHLSYNKLELVPEGISRCVKLQKLKLDHNRLITLPEGIHLLPD-LKVLDLHENE 373
Query: 162 RVFNEMKPEFARKQLS--NLTLTTEHR 88
+ KP ARK+L+ N+ + EH+
Sbjct: 374 NLVMPPKPNDARKKLAFYNIDFSLEHQ 400
>Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical
protein F59B8.2 protein.
Length = 412
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -3
Query: 249 FPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHR 88
F Y R P S NT+LK D K +F E+ PE+ + + EHR
Sbjct: 197 FKYALQRKFPLYLSTKNTILKKYD-GRFKDIFAEIYPEY-EAEFKAAGIWYEHR 248
>AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family
protein 31 protein.
Length = 747
Score = 27.5 bits (58), Expect = 5.1
Identities = 30/121 (24%), Positives = 46/121 (38%)
Frame = -3
Query: 375 NEMSYLTRKIALIPRVALSRFYNKIVITDDGSTIVALHQDYDFPYEHSRALPEETSKDNT 196
N M ++ I L + N S+ AL+QD E S + ++ S +N
Sbjct: 312 NPMDQQSKSIDLNQTTWAPQSINNPGYLSTASSPAALNQDSSAS-EKSSIVRDKKSDENC 370
Query: 195 VLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHRWYPRARDKKAKKTEMNRPYL*TF* 16
LDE RVFNE+ +F K+ L+ W + + + P L F
Sbjct: 371 ------LDEFDRVFNELDQQFTPKEDQVQDLSNCTTWNQEPINNSIQSNQFINPELFYFI 424
Query: 15 F 13
F
Sbjct: 425 F 425
>Z83127-6|CAB05633.1| 327|Caenorhabditis elegans Hypothetical
protein C27D8.1 protein.
Length = 327
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 258 DYDFPYEHSRALPEETSKDNTVLKM 184
D D PY+ PE+TSK+ T KM
Sbjct: 302 DIDSPYDWELQKPEKTSKEPTSSKM 326
>Z80214-6|CAB02266.1| 327|Caenorhabditis elegans Hypothetical
protein C27D8.1 protein.
Length = 327
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 258 DYDFPYEHSRALPEETSKDNTVLKM 184
D D PY+ PE+TSK+ T KM
Sbjct: 302 DIDSPYDWELQKPEKTSKEPTSSKM 326
>Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical
protein R04F11.3 protein.
Length = 385
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -3
Query: 225 LPEETSKDNTVLKMTDLDEVKRVFNEMKP--EFARKQLSNLTLTTEHRWYPRARDKKAKK 52
+P++ K N M ++DE + + KP + K+ L ++ + +P +R++ +K
Sbjct: 202 VPQDQEKKNRKRPMIEVDESEELIKATKPKEKTPEKKPEKLIISQDSDEFPSSREQSVEK 261
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,017,936
Number of Sequences: 27780
Number of extensions: 157042
Number of successful extensions: 375
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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