Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_B19
(703 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 51 8e-07
11_02_0012 - 7346282-7347136,7347234-7347593 50 2e-06
01_06_0824 - 32243495-32244319,32244449-32244859 49 4e-06
11_01_0771 + 6453130-6454488 48 5e-06
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 46 3e-05
11_01_0750 - 6315126-6315896,6316371-6316784 45 7e-05
04_04_0619 + 26652923-26653267,26653440-26654273 43 2e-04
04_04_0620 + 26656072-26656417,26656585-26657396 43 3e-04
01_01_1152 + 9170628-9171899 37 0.013
11_02_0011 - 7337618-7338496,7338596-7338991 36 0.024
11_01_0767 + 6438648-6438809,6439146-6440000 36 0.041
05_06_0044 - 25150322-25151260 36 0.041
02_05_0969 + 33165396-33165935,33166352-33166883,33166988-331672... 29 2.7
11_06_0528 - 24681630-24681751,24681911-24682025,24682134-246821... 29 4.7
03_02_0556 + 9448878-9449264 29 4.7
09_06_0048 + 20477076-20478547,20478643-20478722,20478880-204788... 28 6.2
04_03_0430 + 15836839-15836973,15837267-15837359,15838975-15839139 28 8.3
04_03_0420 + 15703479-15703613,15703907-15703999,15705615-15705779 28 8.3
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 51.2 bits (117), Expect = 8e-07
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 8/174 (4%)
Frame = -3
Query: 695 KYGESHDLNAQLLEMAYE-GXDA---SMVIVLPNEINGLDGILQKL-ADGYDLTAELDKM 531
+Y S+D N ++L++ Y+ G D SM I+LP +GL + +KL ++ L +
Sbjct: 289 QYILSYD-NLKVLKLPYQQGGDKRQFSMYILLPEAQDGLWSLAEKLNSEPEFLEKHIPTR 347
Query: 530 FSTKVRVTVPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDE--PLYVSKAVQK 357
T + +PKFKI + +L LG+ F+ + + LT+++D+ E L+VS K
Sbjct: 348 QVTVGQFKLPKFKISFGFEASDLLKSLGLHLPFSSE-ADLTEMVDSPEGKNLFVSSVFHK 406
Query: 356 AFIXXXXXXXXXXXXXXXXXXMRCARPPSPSFHADRPFLYFL-VGAERIALFIG 198
+F+ +R A P + F AD PFL+ + + LF+G
Sbjct: 407 SFVEVNEEGTEAAAATAAVITLRSA-PIAEDFVADHPFLFLIQEDMTGVVLFVG 459
Score = 40.7 bits (91), Expect = 0.001
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 8/174 (4%)
Frame = -3
Query: 695 KYGESHDLNAQLLEMAY-EGXDA---SMVIVLPNEINGLDGILQKLADGYDLTAELDKMF 528
+Y S+D + ++L++ Y +G D SM I+LP +GL + +KL + M
Sbjct: 541 QYLSSYD-SLKVLKLPYLQGGDKRQFSMYILLPEAQDGLWSLAEKLNSEPEFMENHIPMR 599
Query: 527 STKV-RVTVPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDND--EPLYVSKAVQK 357
V + +PKFKI +L LG+ +F + L +++D+ + L+VS K
Sbjct: 600 PVHVGQFKLPKFKISFGFGASGLLKGLGLPLLFGSEVD-LIEMVDSPGAQNLFVSSVFHK 658
Query: 356 AFIXXXXXXXXXXXXXXXXXXMRCARPPSPSFHADRPFLYFL-VGAERIALFIG 198
+FI +RP +F AD PF++ + + LFIG
Sbjct: 659 SFIEVNEEGTEATAAVMVSMEH--SRPRRLNFVADHPFMFLIREDVTGVILFIG 710
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 49.6 bits (113), Expect = 2e-06
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 10/175 (5%)
Frame = -3
Query: 692 YGESHDLNAQLLEMAYEGXDASMVIVLPNEINGLDGILQKLADGYDLTAELDKMFS---- 525
+G+ D+ +L+ E SM I LP+ +GL ++ K+A TA +
Sbjct: 222 HGDGGDITPAILKHYGENVGLSMYIFLPDARDGLPALVDKMAVASSGTASSSFLRDHRPG 281
Query: 524 -TKVRV---TVPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQK 357
+++V VP+FK+ ++ +VL +GI A F+ L+ ++D E + V K + +
Sbjct: 282 RRRIKVGDLRVPRFKVSFYSEMNEVLKGMGIGAAFDVGKVDLSGMIDG-ELVVVEKVMHR 340
Query: 356 AFIXXXXXXXXXXXXXXXXXXMRCARPPSP-SFHADRPFLYFLVGAERIA-LFIG 198
A + C SP F AD PF +F+V + A LF G
Sbjct: 341 AVVEVNEEGTEAAAATACTMKFLCLTLTSPVDFVADHPFAFFVVEEKSDAVLFAG 395
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 48.8 bits (111), Expect = 4e-06
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Frame = -3
Query: 629 SMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVRV---TVPKFKIETEIDLLQVL 459
SM I LP+E +GL +L+KL E + KV V VP+F + + + + L
Sbjct: 248 SMYIYLPDERHGLPDMLRKLCSDPAALIESSAALTEKVPVGAFMVPRFTLSYKTNAAETL 307
Query: 458 PKLGIQAIFNRQNSGLTKILDND---EPLYVSKAVQKAFIXXXXXXXXXXXXXXXXXXMR 288
+LG++ F + L++++++ E + VS ++F+ +
Sbjct: 308 RQLGLRLPFEYPGADLSEMVESSPEAEKIVVSAVYHESFVEVNEEGTEAAAATAVVMTLG 367
Query: 287 CARPPSP----SFHADRPFLYFL-VGAERIALFIGQ 195
CA P +P F AD PF++ + + +F GQ
Sbjct: 368 CAAPSAPVHVVDFVADHPFMFLIKEDLTGVVVFAGQ 403
>11_01_0771 + 6453130-6454488
Length = 452
Score = 48.4 bits (110), Expect = 5e-06
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Frame = -3
Query: 629 SMVIVLPNEINGLDGILQKLAD--GYDLTAELDKMFSTKV-RVTVPKFKIETEIDLLQVL 459
+M I LP+ +GL G+++++A G+ L + + V VPKFK+ ++ L
Sbjct: 295 AMAIFLPDARDGLRGLVERMASRPGF-LHEHMPAAWPVPVGEFRVPKFKVSCGGSVVGAL 353
Query: 458 PKLGIQAIFNRQNSGLTKILDNDE---PLYVSKAVQKAFIXXXXXXXXXXXXXXXXXXMR 288
+LG++ F+ + + L+ ++++D PL+V KA I
Sbjct: 354 EQLGLRLPFSPELADLSDMVEDDGSGWPLFVGDIQHKAVIEVNEEGTVAAAATMTRMLPS 413
Query: 287 CARPPSPSFHADRPFLYFLV 228
PP F A+ PF YF+V
Sbjct: 414 GVPPPPVDFVAEHPFAYFIV 433
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 46.0 bits (104), Expect = 3e-05
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 8/174 (4%)
Frame = -3
Query: 695 KYGESHDLNAQLLEMAYE-GXDA---SMVIVLPNEINGLDGILQKL-ADGYDLTAELDKM 531
+Y S+D + ++L++ Y+ G D SM I+LP +GL + KL ++ L +
Sbjct: 81 QYLSSYD-SLKVLKLPYQKGRDLRQFSMYILLPEAQDGLWSLAAKLNSEPEFLEKRIPTR 139
Query: 530 FSTKVRVTVPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDE--PLYVSKAVQK 357
T + +PKFKI + +L LG+Q F+ + LT ++ + E L+VS K
Sbjct: 140 QVTVGKFKLPKFKISFGFEASDLLKILGLQLPFS-SKADLTGMVGSPERHNLFVSSLFHK 198
Query: 356 AFIXXXXXXXXXXXXXXXXXXMRCARPPSPSFHADRPFLYFL-VGAERIALFIG 198
+F+ R A P + F AD PFL+ + + LFIG
Sbjct: 199 SFVQVDEEGTEAAAASAAVVSFRSA-PVTVDFVADHPFLFLIREDMTGVVLFIG 251
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 44.8 bits (101), Expect = 7e-05
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 7/157 (4%)
Frame = -3
Query: 680 HDLNAQLLEMAY-EGXDA---SMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVR 513
HD N +++++ Y +G + SM I LP++ +GL + QK+ + V
Sbjct: 223 HD-NFKVIKLPYKQGKNERKFSMYIFLPDDHDGLFELTQKIFSEPMFLEQHLPTEKCHVG 281
Query: 512 VTVPKFKIETEIDLLQVLPKLGIQAIFNRQN--SGLTKILDNDEPLYVSKAVQKAFIXXX 339
++VP FKI +ID+ L +G++ F R+ S + K D+ PL++S + KA +
Sbjct: 282 ISVPNFKISFQIDVKDFLKDMGLELPFLREAEFSDMIKEDDSSGPLFLSDVLHKAVLEVD 341
Query: 338 XXXXXXXXXXXXXXXMRCARP-PSPSFHADRPFLYFL 231
+P P+ F AD PF + +
Sbjct: 342 QKGIEETSVSMG-----LGKPLPAQHFKADHPFFFMI 373
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 43.2 bits (97), Expect = 2e-04
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Frame = -3
Query: 626 MVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVR-VTVPKFKIETEIDLLQVLPKL 450
M++ LP + +GL +L+ D +V VPKFK +E+D L KL
Sbjct: 230 MLVFLPIKRDGLRHLLRMAVTEPDFVMRCVPRSEQEVSPCMVPKFKFSSELDARGALAKL 289
Query: 449 GIQAIFNRQNSGLTKILDN----DEPLYVSKAVQKAFIXXXXXXXXXXXXXXXXXXMRCA 282
G+ A F+ + L+++ + E LYVS QK + +
Sbjct: 290 GLGAPFDPLAADLSRMAVSVNTPPERLYVSAMRQKCAVEVDEEGTTAVEATYSCCSPTYS 349
Query: 281 RPPSP-----SFHADRPFLYFLVGAERI-ALFIG 198
P SP SF A+ PF++ +V E+ LF+G
Sbjct: 350 GPESPKPRPMSFVAEHPFMFAIVEYEKAQVLFLG 383
>04_04_0620 + 26656072-26656417,26656585-26657396
Length = 385
Score = 42.7 bits (96), Expect = 3e-04
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Frame = -3
Query: 626 MVIVLPNEINGLDGILQKLADGYD-LTAELDKMFSTKVRVTVPKFKIETEIDLLQVLPKL 450
M++ LP + +GL +L+ D +T + + VPKFK +++D L +L
Sbjct: 223 MLVFLPIKRDGLRHLLRMAVTEPDFVTRCVPRSRQIVTPCKVPKFKFSSQLDAGGALAQL 282
Query: 449 GIQAIFNRQNSGLTKILDNDEP--LYVSKAVQKAFI------XXXXXXXXXXXXXXXXXX 294
G+ A F+ + L+++ N P LYVS QK +
Sbjct: 283 GLGAPFDPDAADLSRMAVNTPPAGLYVSTMRQKCAVEVDEEGTTAVEAMYSPSSPGYSPG 342
Query: 293 MRCARPPSPSFHADRPFLYFLVGAERI-ALFIG 198
+ RPP SF A+ PF++ +V ++ LF+G
Sbjct: 343 YQPPRPPPMSFVAEHPFMFAIVEYKKAQVLFLG 375
>01_01_1152 + 9170628-9171899
Length = 423
Score = 37.1 bits (82), Expect = 0.013
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 8/141 (5%)
Frame = -3
Query: 626 MVIVLPNEINGLDGILQKLADGYDL---TAELDKMFSTKV-----RVTVPKFKIETEIDL 471
M+++LP+ DG L KLAD YD+ T E K + R+ VPKFK + +
Sbjct: 271 MLLLLPDG----DGAL-KLADLYDMAVTTPEFIKKHTPAAEAPVRRLMVPKFKFSFKFEA 325
Query: 470 LQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFIXXXXXXXXXXXXXXXXXXM 291
+ KLG+ F + ++ + L++++ +A I
Sbjct: 326 KSDMRKLGVTRAF--AGGDFSGMVTGGDGLFIAEVYHQATIEVDELGTVAAASTAVVMMQ 383
Query: 290 RCARPPSPSFHADRPFLYFLV 228
+ + P F ADRPFL+ +V
Sbjct: 384 KGSSLPPVDFVADRPFLFAVV 404
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 36.3 bits (80), Expect = 0.024
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 8/147 (5%)
Frame = -3
Query: 644 EGXDASMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVR----VTVPKFKIETEI 477
E SM I LP+E +GL ++ K+A ++ L T+ R + VP+FK+
Sbjct: 258 ENVGLSMYIFLPDERDGLPALVDKMAASSSSSSFLRDHRPTRRREVGDLRVPRFKVSFYS 317
Query: 476 DLLQVLPKLGIQAIFNRQNSGLTKILDNDEP----LYVSKAVQKAFIXXXXXXXXXXXXX 309
+ VL +G+ A F+ + L+ + + + L V + +A +
Sbjct: 318 QINGVLQGMGVTAAFDAGEADLSGMAEGVDQRGGGLVVEEVFHRAVVEVNEEGTEAAAST 377
Query: 308 XXXXXMRCARPPSPSFHADRPFLYFLV 228
+ P F AD PF +F+V
Sbjct: 378 ACTIRLLSMSYPE-DFVADHPFAFFVV 403
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 35.5 bits (78), Expect = 0.041
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Frame = -3
Query: 659 LEMAYEGXDASMVIVLPNEINGLDGILQKLADGYDLTAE-LDKMFSTKVRVTVPKFKIE- 486
L++ Y +M++ LP++ +GL G+L ++ + E L R VPKFK+
Sbjct: 160 LKLRYSLPSFAMLVFLPDDRDGLPGLLDRITASPEFVDEHLPPGCVPVGRFRVPKFKLAF 219
Query: 485 TEIDLLQVLPKLGIQA---IFNRQNSGLTKILD-NDEPLYVSKAVQKAFI 348
+ VL LG++ +F + SG+ D D ++VS + K +
Sbjct: 220 CHYGIADVLRGLGLRLPFDMFAAEMSGIAVEGDGEDAAMFVSSVIHKVVV 269
>05_06_0044 - 25150322-25151260
Length = 312
Score = 35.5 bits (78), Expect = 0.041
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 8/153 (5%)
Frame = -3
Query: 629 SMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVRV---TVPKFKIETEIDLLQVL 459
+M I LP++ +GL + +KLA + + V V +PKF++ +++ ++L
Sbjct: 154 AMYIYLPDDRDGLPELARKLASNPAAFLRRTIVPAQPVAVGELKIPKFEVSLKVEASRLL 213
Query: 458 PKLGIQAIF--NRQNSGLTKILDNDEPLYVSKAVQKAFIXXXXXXXXXXXXXXXXXXMRC 285
+ G+ F NS +LD + VS + + F+
Sbjct: 214 REFGLDLPFLPAADNSFSGMLLDPPQGTAVSSLLHQCFVNVNEEGTVAAAGTVGEIMG-F 272
Query: 284 ARPPSP--SFHADRPFLYFLV-GAERIALFIGQ 195
A P F AD PFL+F+V + +F GQ
Sbjct: 273 AMPDDQIVDFVADHPFLFFIVEEVSGLVVFAGQ 305
>02_05_0969 +
33165396-33165935,33166352-33166883,33166988-33167242,
33167515-33167606,33167745-33167942,33168049-33168240,
33168341-33168562,33168858-33169024,33169117-33169210,
33169308-33169364,33169459-33169587,33169681-33169752,
33170180-33170293,33170419-33170580,33170666-33170794,
33171057-33171158,33171266-33171342,33171470-33171592,
33171666-33172227
Length = 1272
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/66 (22%), Positives = 28/66 (42%)
Frame = -3
Query: 695 KYGESHDLNAQLLEMAYEGXDASMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKV 516
+YG+ D + ++ MA++ S +LP + L + D + +LD + V
Sbjct: 423 RYGDVWDKSFHVISMAFDKLGESSADLLPEALKNLADMQNLSDDDFSFRKQLDSCLGSAV 482
Query: 515 RVTVPK 498
PK
Sbjct: 483 AAMGPK 488
>11_06_0528 -
24681630-24681751,24681911-24682025,24682134-24682193,
24682454-24682513,24682606-24682668,24682752-24682798,
24682884-24683049,24683136-24683228,24683306-24683370,
24683462-24683537,24683644-24683709,24684114-24684203,
24684359-24684421,24684548-24684670
Length = 402
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = -3
Query: 581 LQKLADGYDLTAELDKMFSTKVRVTVPKFKIETEIDLLQVLPKLGIQAIFNR 426
L K+ + L ++ V++ +I+ I+ ++ LPK G+Q +FNR
Sbjct: 161 LAKVGRQKEFEIALQRLRGKDADVSIEAAEIKEFIETIENLPKAGVQDLFNR 212
>03_02_0556 + 9448878-9449264
Length = 128
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -1
Query: 685 RATTSMRSYLKWRMKVTMPAWLSCCRTKLMAWTG 584
RA + Y WR + +P WL C R W G
Sbjct: 70 RAAERVVQYHPWRPRGRVPLWLPCSRGLRRRWGG 103
>09_06_0048 +
20477076-20478547,20478643-20478722,20478880-20478893,
20480164-20481199,20481275-20481402,20481673-20481732,
20481774-20481878,20481971-20482055,20482315-20482470,
20482562-20482831,20482877-20483671,20483844-20483903,
20484062-20485134
Length = 1777
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 174 DSISSTVLADEQSDAFRAHEEVEEGSVGME 263
D +SSTVL D D +A + V E GM+
Sbjct: 151 DVVSSTVLNDASIDLVKASDSVSEEGTGMD 180
>04_03_0430 + 15836839-15836973,15837267-15837359,15838975-15839139
Length = 130
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -3
Query: 545 ELDKMFSTKVRVTVPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDE 387
+ DK+ K+RV PK ++ D + +L + + R +S + ILD E
Sbjct: 48 DADKLTDVKIRVDPPKLLVQAHGDQSEDQEQLSTRLGYGRVHSIIENILDKCE 100
>04_03_0420 + 15703479-15703613,15703907-15703999,15705615-15705779
Length = 130
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -3
Query: 545 ELDKMFSTKVRVTVPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDE 387
+ DK+ K+RV PK ++ D + +L + + R +S + ILD E
Sbjct: 48 DADKLTDVKIRVDPPKLLVQAHGDQSEDQEQLSTRLGYGRVHSIIENILDKCE 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,974,826
Number of Sequences: 37544
Number of extensions: 328389
Number of successful extensions: 948
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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