Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_B19
         (703 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.8  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   3.7  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -1

Query: 256 PTDPSSTSSWARNASLCSSANTVD-EIESCFYVRHLLFL*PYKPNFALISLF*FPH 92
           P  P+S+S+ +   S+CSS  + D E+E    ++ +L   P     +L+     PH
Sbjct: 589 PDKPASSSASSAPTSVCSSPRSEDKEVEDMPVLKRVLQAPPLYDTNSLMDEAYKPH 644


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +2

Query: 623 PCWHRXLHTPFQVTAH*GRGSHH 691
           P +H   H P Q   H G   HH
Sbjct: 314 PSYHPHQHHPSQYHPHRGSSPHH 336


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -3

Query: 461 LPKLGI-QAIFNRQNSGLTKILDNDEPLYVSKAVQK 357
           + K GI + I N  N G   I D +  LY+  A++K
Sbjct: 34  MAKTGINKQIINDVNDGKINIEDENVQLYIECAMKK 69


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,581
Number of Sequences: 438
Number of extensions: 3144
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)