Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_B16
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...   118   6e-29
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    81   8e-18
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    50   1e-08
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       25   0.73 

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score =  118 bits (283), Expect = 6e-29
 Identities = 60/156 (38%), Positives = 89/156 (57%)
 Frame = -3

Query: 581 YNSIQNMVYLDMVVSELLRLWPPGVSMDRICVQDYNLGKPNDKAKRDFTLRKGTGVAIPV 402
           Y+ I+ M YLD V  E LR++PP   + R  + DY     ND      T+ K   + IP 
Sbjct: 347 YDDIKEMEYLDKVFKETLRMYPPASILMRKAISDYTF---NDTK---ITIPKEMKIWIPA 400

Query: 401 WAFHRNPEFFPDPLKFDPERFSEENKHNIKPFAYLPFGVGPRNCIGSRFALCEVKVMAYQ 222
           +A HR+   +P+P  FDPERF ++   +  P  YLPFG GPRNCIG+RFA+ + KV    
Sbjct: 401 FAIHRDSAIYPNPDSFDPERFDQDAMASRHPMHYLPFGDGPRNCIGARFAVYQTKVGLIT 460

Query: 221 LLQHMEISPCEKTCIPSKLSKETFNLRLEGGHWVRL 114
           +L++ ++  CEKT IP +     F L  + G ++++
Sbjct: 461 ILRNHKVEVCEKTIIPYEFDPGAFLLSPKDGIYLKI 496


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 81.0 bits (191), Expect = 8e-18
 Identities = 39/121 (32%), Positives = 66/121 (54%)
 Frame = -3

Query: 563 MVYLDMVVSELLRLWPPGVSMDRICVQDYNLGKPNDKAKRDFTLRKGTGVAIPVWAFHRN 384
           M YL+  + E LR++PP   + R    D  L      A  D+T+  G  V I  +  HR 
Sbjct: 397 MKYLERCLLETLRMYPPVPLIAREIKTDLKL------ASGDYTIPAGCTVVIGTFKLHRQ 450

Query: 383 PEFFPDPLKFDPERFSEENKHNIKPFAYLPFGVGPRNCIGSRFALCEVKVMAYQLLQHME 204
           P  +P+P  FDP+ F  E   N   +A++PF  GPR+C+G ++A+ ++K++   +L++  
Sbjct: 451 PHIYPNPDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVGRKYAMLKLKIVLSTILRNFR 510

Query: 203 I 201
           +
Sbjct: 511 V 511


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 50.4 bits (115), Expect = 1e-08
 Identities = 35/126 (27%), Positives = 57/126 (45%)
 Frame = -3

Query: 578 NSIQNMVYLDMVVSELLRLWPPGVSMDRICVQDYNLGKPNDKAKRDFTLRKGTGVAIPVW 399
           ++++   YL   ++E LRL P    + RI  +   L          + L  GT V +  W
Sbjct: 373 DNLRKAKYLRACITESLRLIPTTTCIARILDEPIELS--------GYRLTAGTVVLLHTW 424

Query: 398 AFHRNPEFFPDPLKFDPERFSEENKHNIKPFAYLPFGVGPRNCIGSRFALCEVKVMAYQL 219
               N E F D  K+ PER++     +  P    PFG G R C G RF    ++++  ++
Sbjct: 425 IAGLNEENFKDAKKYLPERWTTPTTPH-SPLLVAPFGAGRRICPGKRFVDLALQLILAKI 483

Query: 218 LQHMEI 201
           ++  EI
Sbjct: 484 IREFEI 489


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 577 TPYRIWCIWIWLFQNS 530
           TPY +  +W W+ +NS
Sbjct: 274 TPYYVMSLWYWIDRNS 289


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,911
Number of Sequences: 438
Number of extensions: 4086
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)