Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_B12
         (454 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical pr...    30   0.91 
Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical p...    30   0.91 
Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical p...    30   0.91 
Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical
           protein R05H10.6 protein.
          Length = 1364

 Score = 29.9 bits (64), Expect = 0.91
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -1

Query: 280 KNQVESRLGDNVKGQYSL--LESDGTRRTVDYAAGAEGFN 167
           K  V+  +  + KG  SL  +E DGT R+ D+ AG+EG +
Sbjct: 760 KELVKFEMTSDEKGMSSLFGIEEDGTIRSKDWLAGSEGMH 799


>Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical
           protein F32D8.7b protein.
          Length = 380

 Score = 29.9 bits (64), Expect = 0.91
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 340 SAGDYSNFAYSVADPYTGDFKNQVESR 260
           ++ DY+N A S  DP+T DF  Q+ +R
Sbjct: 62  TSSDYTNIATSKCDPHTCDFPRQICAR 88


>Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical
           protein F32D8.7a protein.
          Length = 378

 Score = 29.9 bits (64), Expect = 0.91
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 340 SAGDYSNFAYSVADPYTGDFKNQVESR 260
           ++ DY+N A S  DP+T DF  Q+ +R
Sbjct: 62  TSSDYTNIATSKCDPHTCDFPRQICAR 88


>Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical
           protein ZC84.6 protein.
          Length = 1474

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +2

Query: 332 AGAGDGHKGKNNDELHEHFSSYCRDYVNVTCGPTSAGRIH 451
           + +G G    NN    EH  S+CRD    TC   +   IH
Sbjct: 247 SASGSGEHSPNNFRTVEHCESFCRD----TCSRGAPEYIH 282


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,380,239
Number of Sequences: 27780
Number of extensions: 134755
Number of successful extensions: 407
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)