Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_B12
(454 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 0.89
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 6.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 8.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 8.3
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 8.3
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.3
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 0.89
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = -1
Query: 451 MNSAGRCRTTSHIDVVATITRKMFVKFXXXXXXXXXASAGDYSNFAYSVADPYTGDFKNQ 272
+++ G C +S +DV + +K++ + +S+ YS+F Y ++ +
Sbjct: 922 VSNDGGC--SSLVDVSTPVNKKVYKQ--NDYIVDESSSSSFYSSFLYKSSESSCNPDQKP 977
Query: 271 VESRLGDNVKGQY 233
E L D++K QY
Sbjct: 978 TEYLLEDSMKQQY 990
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +2
Query: 203 PASTVRLQQRVLTLHVVSQSALHLVLE 283
PAS + Q++L H++S + L ++
Sbjct: 67 PASGIHQMQQLLQQHILSPTQLQSFMQ 93
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 20.6 bits (41), Expect = 8.3
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 296 LHGRLQEPGGEPTGRQREG 240
+H + PG P ++REG
Sbjct: 393 MHNVVYRPGENPVTQKREG 411
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.6 bits (41), Expect = 8.3
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 296 LHGRLQEPGGEPTGRQREG 240
+H + PG P ++REG
Sbjct: 413 MHNVVYRPGENPVTQKREG 431
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 20.6 bits (41), Expect = 8.3
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 296 LHGRLQEPGGEPTGRQREG 240
+H + PG P ++REG
Sbjct: 362 MHNVVYRPGENPVTQKREG 380
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 52 YNGYFPYNYKGIFY 11
YN Y +NY ++Y
Sbjct: 98 YNNYNKHNYNKLYY 111
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 52 YNGYFPYNYKGIFY 11
YN Y +NY ++Y
Sbjct: 98 YNNYNKHNYNKLYY 111
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 52 YNGYFPYNYKGIFY 11
YN Y +NY ++Y
Sbjct: 98 YNNYNKHNYNKLYY 111
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 52 YNGYFPYNYKGIFY 11
YN Y +NY ++Y
Sbjct: 98 YNNYNKHNYNKLYY 111
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 52 YNGYFPYNYKGIFY 11
YN Y +NY ++Y
Sbjct: 98 YNNYNKHNYNKLYY 111
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 52 YNGYFPYNYKGIFY 11
YN Y +NY ++Y
Sbjct: 98 YNNYNKHNYNKLYY 111
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 52 YNGYFPYNYKGIFY 11
YN Y +NY ++Y
Sbjct: 98 YNNYNKHNYNKLYY 111
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 52 YNGYFPYNYKGIFY 11
YN Y +NY ++Y
Sbjct: 98 YNNYNKHNYNKLYY 111
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 52 YNGYFPYNYKGIFY 11
YN Y +NY ++Y
Sbjct: 98 YNNYNKHNYNKLYY 111
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 8.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 52 YNGYFPYNYKGIFY 11
YN Y +NY ++Y
Sbjct: 331 YNNYNKHNYNKLYY 344
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 8.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 52 YNGYFPYNYKGIFY 11
YN Y +NY ++Y
Sbjct: 331 YNNYNKHNYNKLYY 344
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,553
Number of Sequences: 438
Number of extensions: 1631
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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