Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_B09
         (753 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22SH3 Cluster: Putative uncharacterized protein; n=2; ...    31   4.6  
UniRef50_Q9EMP3 Cluster: AMV156; n=1; Amsacta moorei entomopoxvi...    33   5.7  

>UniRef50_Q22SH3 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Tetrahymena thermophila SB210
          Length = 1200

 Score = 31.1 bits (67), Expect(2) = 4.6
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +1

Query: 268 HNAYHISLIKHTHVKISIKHLI*LKYTY*YENICYFYSSXNLRLRIYF 411
           H+ YHI+  K T   ++I  L  LKY Y Y  I        + L IYF
Sbjct: 196 HSKYHINFNKETF-SLAINQLNQLKYLYNYSRIIKILKFYQIYLFIYF 242



 Score = 21.4 bits (43), Expect(2) = 4.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 529 IFSYFFYICLINIL 570
           +F YFF  CLI I+
Sbjct: 238 LFIYFFLTCLIIII 251


>UniRef50_Q9EMP3 Cluster: AMV156; n=1; Amsacta moorei entomopoxvirus
            'L'|Rep: AMV156 - Amsacta moorei entomopoxvirus (AmEPV)
          Length = 1238

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = +1

Query: 211  NILRKYF*KISILYNFII*HNAYHISLIKHTHVKISIKHLI*LKYTY*YENICYFYS 381
            + L KY  KI+  +N  I +N+Y   L ++ +   SI  +I   YTY  E+I Y+ S
Sbjct: 982  DFLNKYINKINNTFNIKILNNSYKKILFEYDNNSNSINDIIKNIYTYKTEDISYYIS 1038


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,672,349
Number of Sequences: 1657284
Number of extensions: 10398577
Number of successful extensions: 18217
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18213
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)